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GWC2_NC10X_70_24_gwc2_scaffold_3678_7

Organism: Candidatus Rokubacteria bacterium GWC2_70_24

near complete RP 44 / 55 MC: 2 BSCG 44 / 51 MC: 2 ASCG 11 / 38
Location: comp(7523..8245)

Top 3 Functional Annotations

Value Algorithm Source
Putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily id=4411417 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 241.0
  • Bit_score: 467
  • Evalue 6.80e-129
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 240.0
  • Bit_score: 467
  • Evalue 9.50e-129
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 237.0
  • Bit_score: 336
  • Evalue 6.60e-90

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Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGGAAGGACTCATCGCCCAGGGCCTGGTGAAGCGCTTTCGCAACCGCCTCGTGGTGGACGGCGTCAGCCTCGACATCCACCGCGGAGAAGTGGTGGGCCTCCTGGGCCCCAACGGGGCGGGGAAGACGACGTCGTTCTACATGATCGTGGGGCTCCTGCGGCCCGAGGGCGGCCGCATCTTCCTCGAGGGCCAGGAGATCACCGACCTGCCCATGTACCTGCGCTGCCGGAAGGGGATGGGCTACCTGCCCCAGGAATCGTCCGTGTTCCGCAAGCTCACGGTGGAGGAGAACCTCCTGGCCATCCTCGAGACCATGGACCTGTCCGCCCAGGAGCGCGCCGCCCGGCTCCGGGTGCTGCTCGCCGAGCTCGACCTGACCCCGCTGGCGCGGCACAAGGCCTACACCCTGTCCGGCGGCGAGCGCCGGCGGCTCGAGATCACGCGGGCCCTCGTCACGAACCCGCGCTACCTCCTGCTCGACGAGCCCTTCACCGGGATCGACCCCATCGCCATCGGCGACATCCAGGAGATCGTCGCGCGGCTCAAGGAGCGCGGGATCGGCGTGCTCATCACCGACCACAACGTGCGGGAGACGCTCGCGATCACCGATCGCGCGTACATCCTGTACCACGGCCGCATCCTGGCGTCGGGGACCGCCACCGAGCTCGCCAACAACCCCAAGGCCCGGGAGATCTACCTCGGGGAGAAGTTCTCGCTGTGA
PROTEIN sequence
Length: 241
MEGLIAQGLVKRFRNRLVVDGVSLDIHRGEVVGLLGPNGAGKTTSFYMIVGLLRPEGGRIFLEGQEITDLPMYLRCRKGMGYLPQESSVFRKLTVEENLLAILETMDLSAQERAARLRVLLAELDLTPLARHKAYTLSGGERRRLEITRALVTNPRYLLLDEPFTGIDPIAIGDIQEIVARLKERGIGVLITDHNVRETLAITDRAYILYHGRILASGTATELANNPKAREIYLGEKFSL*