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GWC2_NC10X_70_24_gwc2_scaffold_3678

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Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC2_NC10X_70_24_gwc2_scaffold_3678_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..1134)
DNA (1134bp) protein (378aa)
adenosylhomocysteinase (EC:3.3.1.1) Tax=GWA2_Rokubacteria_70_23_curated
adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase id=4411403 bin=GWC2_Methylomirabilis_70_24 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_3678_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1268..2419)
DNA (1152bp) protein (384aa)
metK; methionine adenosyltransferase (EC:2.5.1.6) Tax=GWA2_Rokubacteria_70_23_curated
metK; methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase id=4527173 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GWC2_NC10X_70_24_gwc2_scaffold_3678_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2512..4617)
DNA (2106bp) protein (702aa)
Alpha-amylase id=4411407 bin=GWC2_Methylomirabilis_70_24 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
alpha-amylase/alpha-mannosidase Tax=GWA2_Rokubacteria_70_23_curated
alpha-amylase/alpha-mannosidase
GWC2_NC10X_70_24_gwc2_scaffold_3678_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4610..5503)
DNA (894bp) protein (298aa)
UPF0042 nucleotide-binding protein DAMO_1192 id=4411409 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_3678_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5500..6033)
DNA (534bp) protein (178aa)
Protein DR_1082 id=4411411 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
protein DR_1082 Tax=GWA2_Rokubacteria_70_23_curated
protein DR_1082
GWC2_NC10X_70_24_gwc2_scaffold_3678_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6049..7500)
DNA (1452bp) protein (484aa)
RNA polymerase sigma-54 factor id=4411414 bin=GWC2_Methylomirabilis_70_24 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
RNA polymerase sigma 54 subunit RpoN; K03092 RNA polymerase sigma-54 factor Tax=GWA2_Rokubacteria_70_23_curated
RNA polymerase sigma 54 subunit RpoN
GWC2_NC10X_70_24_gwc2_scaffold_3678_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7523..8245)
DNA (723bp) protein (241aa)
Putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily id=4411417 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily Tax=GWA2_Rokubacteria_70_23_curated
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily
GWC2_NC10X_70_24_gwc2_scaffold_3678_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8245..8868)
DNA (624bp) protein (208aa)
Lipopolysaccharide transport periplasmic protein LptA id=4411420 bin=GWC2_Methylomirabilis_70_24 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
OstA-like protein; K09774 lipopolysaccharide export system protein LptA Tax=GWA2_Rokubacteria_70_23_curated
lptA; lipopolysaccharide ABC transporter periplasmic protein LptA
GWC2_NC10X_70_24_gwc2_scaffold_3678_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8877..9482)
DNA (606bp) protein (202aa)
Hypothetical membrane protein id=4411423 bin=GWC2_Methylomirabilis_70_24 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_3678_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9533..10054)
DNA (522bp) protein (174aa)
3-deoxy-manno-octulosonate-8-phosphatase (EC:3.1.3.45); K03270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] Tax=GWA2_Rokubacteria_70_23_curated
3-deoxy-manno-octulosonate-8-phosphatase (EC:3.1.3.45)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family id=4527162 bin=GWF2_Methylomirabilis_70_14 species=Coxiella burnetii genus=Coxiella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GWC2_NC10X_70_24_gwc2_scaffold_3678_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(10051..11022)
DNA (972bp) protein (324aa)
kpsF; arabinose 5-phosphate isomerase (EC:5.3.1.13) Tax=GWA2_Rokubacteria_70_23_curated
kpsF; arabinose 5-phosphate isomerase (EC:5.3.1.13)
Arabinose 5-phosphate isomerase id=4411425 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_3678_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11096..11884)
DNA (789bp) protein (263aa)
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase; K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] Tax=GWA2_Rokubacteria_70_23_curated
2-dehydro-3-deoxyphosphooctonate aldolase id=4411426 bin=GWC2_Methylomirabilis_70_24 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase
GWC2_NC10X_70_24_gwc2_scaffold_3678_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(12040..13650)
DNA (1611bp) protein (537aa)
pyrG; CTP synthase (CTP synthetase) (EC:6.3.4.2) Tax=GWA2_Rokubacteria_70_23_curated
pyrG; CTP synthase (CTP synthetase) (EC:6.3.4.2)
CTP synthase id=4411427 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_3678_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(13647..15341)
DNA (1695bp) protein (565aa)
hypothetical protein; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] Tax=GWA2_Rokubacteria_70_23_curated
CBS domain containing protein id=4411428 bin=GWC2_Methylomirabilis_70_24 species=Dethiosulfovibrio peptidovorans genus=Dethiosulfovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_3678_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(15346..16257)
DNA (912bp) protein (304aa)
Tyrosine recombinase XerD id=4411429 bin=GWC2_Methylomirabilis_70_24 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
tyrosine recombinase XerD; K04763 integrase/recombinase XerD Tax=GWA2_Rokubacteria_70_23_curated
tyrosine recombinase XerD
GWC2_NC10X_70_24_gwc2_scaffold_3678_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(16382..17968)
DNA (1587bp) protein (529aa)
Integral membrane protein MviN id=4411430 bin=GWC2_Methylomirabilis_70_24 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
integral membrane protein MviN; K03980 virulence factor Tax=GWA2_Rokubacteria_70_23_curated
integral membrane protein MviN
GWC2_NC10X_70_24_gwc2_scaffold_3678_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists


18064..18324
DNA (261bp) protein (87aa)
30S ribosomal protein S20 id=4411431 bin=GWC2_Methylomirabilis_70_24 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
rpsT; 30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 Tax=GWC2_Rokubacteria_70_16_curated
rpsT; 30S ribosomal protein S20
GWC2_NC10X_70_24_gwc2_scaffold_3678_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(18512..19861)
DNA (1350bp) protein (450aa)
Putative uncharacterized protein id=4411432 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Salpingoeca taxon_order=Choanoflagellida taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_3678_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(19846..20844)
DNA (999bp) protein (333aa)
DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta [EC:2.7.7.7] Tax=GWA2_Rokubacteria_70_23_curated
DNA polymerase III, delta subunit id=4411433 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
DNA polymerase III subunit delta
GWC2_NC10X_70_24_gwc2_scaffold_3678_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(20844..21383)
DNA (540bp) protein (180aa)
Putative uncharacterized protein id=4411434 bin=GWC2_Methylomirabilis_70_24 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_3678_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


comp(21383..23881)
DNA (2499bp) protein (833aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=GWA2_Rokubacteria_70_23_curated
leuS; leucine--tRNA ligase (EC:6.1.1.4)
Leucine--tRNA ligase id=4527058 bin=GWF2_Methylomirabilis_70_14 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GWC2_NC10X_70_24_gwc2_scaffold_3678_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(23969..24217)
DNA (249bp) protein (83aa)
id=4411491 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=4411491 Tax=GWA2_Rokubacteria_70_23_curated
GWC2_NC10X_70_24_gwc2_scaffold_3678_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(24214..26082)
DNA (1869bp) protein (623aa)
UvrABC system protein C id=4527056 bin=GWF2_Methylomirabilis_70_14 species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
excinuclease ABC subunit C; K03703 excinuclease ABC subunit C Tax=GWA2_Rokubacteria_70_23_curated
uvrC; excinuclease ABC subunit C
GWC2_NC10X_70_24_gwc2_scaffold_3678_24
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(26169..26378)
DNA (210bp) protein (70aa)
id=4411493 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=4411493 Tax=GWA2_Rokubacteria_70_23_curated
GWC2_NC10X_70_24_gwc2_scaffold_3678_25
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(26383..28407)
DNA (2025bp) protein (675aa)
UvrABC system protein B id=4527054 bin=GWF2_Methylomirabilis_70_14 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
UvrABC system protein B; K03702 excinuclease ABC subunit B Tax=GWA2_Rokubacteria_70_23_curated
UvrABC system protein B
GWC2_NC10X_70_24_gwc2_scaffold_3678_26
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(28413..28943)
DNA (531bp) protein (177aa)
HNH endonuclease id=4411495 bin=GWC2_Methylomirabilis_70_24 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
HNH endonuclease Tax=GWA2_Rokubacteria_70_23_curated
HNH endonuclease
GWC2_NC10X_70_24_gwc2_scaffold_3678_27
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(29015..29443)
DNA (429bp) protein (143aa)
id=4411496 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=4411496 Tax=GWA2_Rokubacteria_70_23_curated
GWC2_NC10X_70_24_gwc2_scaffold_3678_28
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(29564..29713)
DNA (150bp) protein (50aa)
id=4411497 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=4411497 Tax=GWA2_Rokubacteria_70_23_curated
GWC2_NC10X_70_24_gwc2_scaffold_3678_29
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(29710..30636)
DNA (927bp) protein (309aa)
Putative Exopolyphosphatase id=4411498 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Exopolyphosphatase Tax=GWA2_Rokubacteria_70_23_curated
Exopolyphosphatase
GWC2_NC10X_70_24_gwc2_scaffold_3678_30
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(30647..32989)
DNA (2343bp) protein (781aa)
GAF sensor hybrid histidine kinase (EC:2.7.13.3) Tax=GWA2_Rokubacteria_70_23_curated
histidine kinase (EC:2.7.13.3)
Histidine kinase id=4411499 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Displaying items 1-30 of 33 in total

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