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GWD2_DPX3_57_8_gwd2_scaffold_3233

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_DPX3_57_8_gwd2_scaffold_3233_1
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

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comp(203..1135)
DNA (933bp) protein (311aa)
cysteine synthase (EC:2.5.1.47); K01738 cysteine synthase A [EC:2.5.1.47] Tax=GWC2_Nitrospirae_57_13_curated
Cysteine synthase id=1930858 bin=GWD2_Nitrospirae-related_57_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
cysK-1; cysteine synthase A
GWD2_DPX3_57_8_gwd2_scaffold_3233_2
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

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comp(1218..2297)
DNA (1080bp) protein (360aa)
ketoisovalerate oxidoreductase subunit VorB (EC:1.2.7.7); K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=GWC2_Nitrospirae_57_13_curated
ketoisovalerate oxidoreductase subunit VorB (EC:1.2.7.7)
Ketoisovalerate oxidoreductase subunit VorB id=1930859 bin=GWD2_Nitrospirae-related_57_8 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
GWD2_DPX3_57_8_gwd2_scaffold_3233_3
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(2316..2522)
DNA (207bp) protein (69aa)
4Fe-4S ferredoxin; K00176 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] Tax=GWC2_Nitrospirae_57_13_curated
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein id=1930860 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
4Fe-4S ferredoxin
GWD2_DPX3_57_8_gwd2_scaffold_3233_4
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(2510..4240)
DNA (1731bp) protein (577aa)
DNA repair protein RecN id=1930894 bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
recN; DNA repair protein recN (Recombination protein N) Tax=GWC2_Nitrospirae_57_13_curated
DNA recombination protein RecN
GWD2_DPX3_57_8_gwd2_scaffold_3233_5
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(5048..6217)
DNA (1170bp) protein (390aa)
Arabinose efflux permease family protein id=1930900 bin=GWD2_Nitrospirae-related_57_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
major facilitator transporter Tax=GWC2_Nitrospirae_57_13_curated
major facilitator transporter
GWD2_DPX3_57_8_gwd2_scaffold_3233_6
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(6214..7062)
DNA (849bp) protein (283aa)
Putative uncharacterized protein id=1930905 bin=GWD2_Nitrospirae-related_57_8 species=uncultured organism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
putative alpha/beta superfamily hydrolase Tax=GWC2_Nitrospirae_57_13_curated
putative alpha/beta superfamily hydrolase
GWD2_DPX3_57_8_gwd2_scaffold_3233_7
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(7300..8232)
DNA (933bp) protein (311aa)
putative signal peptide peptidase SppA (EC:3.4.21.-); K04773 protease IV [EC:3.4.21.-] Tax=GWC2_Nitrospirae_57_13_curated
putative signal peptide peptidase SppA (EC:3.4.21.-)
Putative Signal peptide peptidase SppA id=1930910 bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
GWD2_DPX3_57_8_gwd2_scaffold_3233_8
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

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comp(8391..9107)
DNA (717bp) protein (239aa)
Putative uncharacterized protein id=1930914 bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
hypothetical protein Tax=GWC2_Nitrospirae_57_13_curated
hypothetical protein
GWD2_DPX3_57_8_gwd2_scaffold_3233_9
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

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comp(9104..11041)
DNA (1938bp) protein (646aa)
nitrogen specific signal transduction histidine kinase NtrB (EC:2.7.13.3); K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=GWC2_Nitrospirae_57_13_curated
nitrogen specific signal transduction histidine kinase NtrB (EC:2.7.13.3)
Signal transduction histidine kinase, nitrogen specific, NtrB id=1930918 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
GWD2_DPX3_57_8_gwd2_scaffold_3233_10
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(11217..12482)
DNA (1266bp) protein (422aa)
Protein TolB id=1930923 bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
tolB; protein tolB Tax=GWC2_Nitrospirae_57_13_curated
tolB; protein tolB
GWD2_DPX3_57_8_gwd2_scaffold_3233_11
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(12632..13318)
DNA (687bp) protein (229aa)
TolA protein id=1930927 bin=GWD2_Nitrospirae-related_57_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
tolA protein; K03832 periplasmic protein TonB Tax=GWC2_Nitrospirae_57_13_curated
tolA protein
GWD2_DPX3_57_8_gwd2_scaffold_3233_12
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(13315..13734)
DNA (420bp) protein (140aa)
Protein TolR id=1930930 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
tolR; protein TolR; K03560 biopolymer transport protein TolR Tax=GWC2_Nitrospirae_57_13_curated
tolR; protein TolR
GWD2_DPX3_57_8_gwd2_scaffold_3233_13
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(13731..14447)
DNA (717bp) protein (239aa)
TolQ protein id=1930935 bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
tolQ; TolQ protein Tax=GWC2_Nitrospirae_57_13_curated
tolQ; TolQ protein
GWD2_DPX3_57_8_gwd2_scaffold_3233_14
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(14583..16514)
DNA (1932bp) protein (644aa)
putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1]; K07219 putative molybdopterin biosynthesis pro
Molybdenum cofactor synthesis domain id=1930938 bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein
GWD2_DPX3_57_8_gwd2_scaffold_3233_15
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(16807..18075)
DNA (1269bp) protein (423aa)
molybdenum cofactor biosynthesis protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1] Tax=GWC2_Nitrospirae_57_13_curated
Molybdopterin biosynthesis enzyme id=1930941 bin=GWD2_Nitrospirae-related_57_8 species=Escherichia coli genus=Escherichia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
molybdenum cofactor biosynthesis protein
GWD2_DPX3_57_8_gwd2_scaffold_3233_16
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(18145..19068)
DNA (924bp) protein (308aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=GWC2_Nitrospirae_57_13_curated
FAD-dependent pyridine nucleotide-disulphide oxidoreductase id=1930945 bin=GWD2_Nitrospirae-related_57_8 species=Ignicoccus hospitalis genus=Ignicoccus taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
GWD2_DPX3_57_8_gwd2_scaffold_3233_17
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

19468..19641
DNA (174bp) protein (58aa)
Putative uncharacterized protein id=1930948 bin=GWD2_Nitrospirae-related_57_8 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
Putative uncharacterized protein Tax=GWC2_Nitrospirae_57_13_curated
Displaying 17 items

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