ggKbase home page

GWD2_DPX3_57_8_gwd2_scaffold_397

Search features with annotation key words

Displaying items 1-30 of 45 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_DPX3_57_8_gwd2_scaffold_397_1
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(1..573)
DNA (573bp) protein (191aa)
Putative glutamate synthase ferredoxin-dependent id=4047655 bin=GWC2_Nitrospirae_57_13 species=Acetobacterium woodii genus=Acetobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
putative glutamate synthase ferredoxin-dependent Tax=GWC2_Nitrospirae_57_13_curated
putative glutamate synthase ferredoxin-dependent
GWD2_DPX3_57_8_gwd2_scaffold_397_2
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(774..2054)
DNA (1281bp) protein (427aa)
Helix-turn-helix domain protein id=1968655 bin=GWD2_Nitrospirae-related_57_8 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
helix-turn-helix domain protein Tax=GWC2_Nitrospirae_57_13_curated
helix-turn-helix domain-containing protein
GWD2_DPX3_57_8_gwd2_scaffold_397_3
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(2316..3401)
DNA (1086bp) protein (362aa)
3-beta hydroxysteroid dehydrogenase/isomerase id=4047660 bin=GWC2_Nitrospirae_57_13 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Male sterility domain-containing protein Tax=GWC2_Nitrospirae_57_13_curated
Male sterility domain-containing protein
GWD2_DPX3_57_8_gwd2_scaffold_397_4
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(3461..3895)
DNA (435bp) protein (145aa)
PilT-like protein id=1968659 bin=GWD2_Nitrospirae-related_57_8 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
putative nucleic acid-binding protein, contains PIN domain Tax=GWC2_Nitrospirae_57_13_curated
hypothetical protein
GWD2_DPX3_57_8_gwd2_scaffold_397_5
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(3892..4155)
DNA (264bp) protein (88aa)
Transcriptional regulator, AbrB family id=1968661 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
hypothetical protein Tax=GWC2_Nitrospirae_57_13_curated
hypothetical protein
GWD2_DPX3_57_8_gwd2_scaffold_397_6
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(4458..5150)
DNA (693bp) protein (231aa)
id=1968663 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
id=1968663 Tax=GWC2_Nitrospirae_57_13_curated
GWD2_DPX3_57_8_gwd2_scaffold_397_7
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(5700..7154)
DNA (1455bp) protein (485aa)
nuoN2; NADH-ubiquinone oxidoreductase chain N protein (EC:1.6.5.3); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=GWC2_Nitrospirae_57_13_curated
nuoN-2; NADH dehydrogenase (quinone) subunit N 2 (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit N id=1968664 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
GWD2_DPX3_57_8_gwd2_scaffold_397_8
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(7359..8903)
DNA (1545bp) protein (515aa)
NADH-quinone oxidoreductase chain M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] Tax=GWC2_Nitrospirae_57_13_curated
NADH-quinone oxidoreductase subunit m (EC:1.6.99.5)
NADH-quinone oxidoreductase chain m id=1968666 bin=GWD2_Nitrospirae-related_57_8 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
GWD2_DPX3_57_8_gwd2_scaffold_397_9
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(8985..10910)
DNA (1926bp) protein (642aa)
proton-translocating NADH-quinone oxidoreductase, chain L Tax=GWC2_Nitrospirae_57_13_curated
Proton-translocating NADH-quinone oxidoreductase, chain L id=4047674 bin=GWC2_Nitrospirae_57_13 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
proton-translocating NADH-quinone oxidoreductase, chain L
GWD2_DPX3_57_8_gwd2_scaffold_397_10
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(11070..11372)
DNA (303bp) protein (101aa)
nuoK2; NADH-ubiquinone oxidoreductase chain K protein (EC:1.6.5.3); K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] Tax=GWC2_Nitrospirae_57_13_curated
nuoK-2; NADH dehydrogenase (quinone) subunit K 2 (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit K id=1968670 bin=GWD2_Nitrospirae-related_57_8 species=Leptospirillum ferrodiazotrophum genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
GWD2_DPX3_57_8_gwd2_scaffold_397_11
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(11490..11996)
DNA (507bp) protein (169aa)
nuoJ; NADH-quinone oxidoreductase membrane subunit J (EC:1.6.99.5); K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3] Tax=GWC2_Nitrospirae_57_13_curated
nuoJ; NADH-quinone oxidoreductase membrane subunit J (EC:1.6.99.5)
NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 id=1968672 bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
GWD2_DPX3_57_8_gwd2_scaffold_397_12
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(11986..12465)
DNA (480bp) protein (160aa)
NADH-quinone oxidoreductase subunit I id=1968674 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
NADH dehydrogenase subunit I Tax=GWC2_Nitrospirae_57_13_curated
NADH dehydrogenase subunit I
GWD2_DPX3_57_8_gwd2_scaffold_397_13
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(12576..13670)
DNA (1095bp) protein (365aa)
nuoH; NADH-quinone oxidoreductase membrane subunit H (EC:1.6.99.5); K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] Tax=GWC2_Nitrospirae_57_13_curated
nuoH; NADH-quinone oxidoreductase membrane subunit H (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit H id=1968676 bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
GWD2_DPX3_57_8_gwd2_scaffold_397_14
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(13681..15864)
DNA (2184bp) protein (728aa)
molybdopterin oxidoreductase; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=GWC2_Nitrospirae_57_13_curated
NADH dehydrogenase I, G subunit id=4047684 bin=GWC2_Nitrospirae_57_13 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
molybdopterin oxidoreductase
GWD2_DPX3_57_8_gwd2_scaffold_397_15
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(15959..17755)
DNA (1797bp) protein (599aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] Tax=GWC2_Nitrospirae_57_13_curated
nuoF; protein NuoF (EC:1.6.99.5)
NuoF id=1968679 bin=GWD2_Nitrospirae-related_57_8 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
GWD2_DPX3_57_8_gwd2_scaffold_397_16
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(17956..18339)
DNA (384bp) protein (128aa)
Ferredoxin id=4047689 bin=GWC2_Nitrospirae_57_13 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
ferredoxin Tax=GWC2_Nitrospirae_57_13_curated
ferredoxin
GWD2_DPX3_57_8_gwd2_scaffold_397_17
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(18443..18973)
DNA (531bp) protein (177aa)
NADH dehydrogenase (ubiquinone) 24 kDa subunit; K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3] Tax=GWC2_Nitrospirae_57_13_curated
NADH dehydrogenase (Ubiquinone) 24 kDa subunit id=1968683 bin=GWD2_Nitrospirae-related_57_8 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
NADH dehydrogenase (ubiquinone) 24 kda subunit
GWD2_DPX3_57_8_gwd2_scaffold_397_18
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(18970..19518)
DNA (549bp) protein (183aa)
Histidine kinase id=1968685 bin=GWD2_Nitrospirae-related_57_8 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
histidine kinase Tax=GWC2_Nitrospirae_57_13_curated
histidine kinase
GWD2_DPX3_57_8_gwd2_scaffold_397_19
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(19524..20270)
DNA (747bp) protein (249aa)
PHP domain-containing protein; K07053 Tax=GWC2_Nitrospirae_57_13_curated
Putative metal-dependent phosphoesterase, PHP family id=1968687 bin=GWD2_Nitrospirae-related_57_8 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
PHP domain-containing protein
GWD2_DPX3_57_8_gwd2_scaffold_397_20
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(20251..20601)
DNA (351bp) protein (117aa)
DRTGG domain-containing protein id=1968721 bin=GWD2_Nitrospirae-related_57_8 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
DRTGG domain-containing protein Tax=GWC2_Nitrospirae_57_13_curated
DRTGG domain-containing protein
GWD2_DPX3_57_8_gwd2_scaffold_397_21
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(20612..21568)
DNA (957bp) protein (319aa)
Putative uncharacterized protein id=1968723 bin=GWD2_Nitrospirae-related_57_8 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
hypothetical protein Tax=GWC2_Nitrospirae_57_13_curated
hypothetical protein
GWD2_DPX3_57_8_gwd2_scaffold_397_22
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(21577..21927)
DNA (351bp) protein (117aa)
DRTGG domain protein id=1968725 bin=GWD2_Nitrospirae-related_57_8 species=Aminobacterium colombiense genus=Aminobacterium taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
hypothetical protein Tax=GWC2_Nitrospirae_57_13_curated
hypothetical protein
GWD2_DPX3_57_8_gwd2_scaffold_397_23
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(21964..23241)
DNA (1278bp) protein (426aa)
NADH-quinone oxidoreductase, F subunit (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] Tax=GWC2_Nitrospirae_57_13_curated
NADH-quinone oxidoreductase, F subunit (EC:1.6.99.5)
NADH-quinone oxidoreductase, F subunit id=1968727 bin=GWD2_Nitrospirae-related_57_8 species=Thermovibrio ammonificans genus=Thermovibrio taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
GWD2_DPX3_57_8_gwd2_scaffold_397_24
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(23252..23716)
DNA (465bp) protein (155aa)
nuoE; NADH-quinone oxidoreductase, E subunit (EC:1.6.5.3) Tax=GWC2_Nitrospirae_57_13_curated
UPI0002987DA9 related cluster id=1968729 bin=GWD2_Nitrospirae-related_57_8 species=Propionibacterium acidipropionici genus=Propionibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
NADH dehydrogenase I, E subunit
GWD2_DPX3_57_8_gwd2_scaffold_397_25
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(23724..24203)
DNA (480bp) protein (160aa)
Putative transcriptional regulator, Crp/Fnr family id=1968731 bin=GWD2_Nitrospirae-related_57_8 species=Fibrobacter succinogenes genus=Fibrobacter taxon_order=Fibrobacterales taxon_class=Fibrobacteria phylum=Fibrobacteres tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
CarD family transcriptional regulator; K10914 CRP/FNR family transcriptional regulator, cyclic AMP receptor protein Tax=GWC2_Nitrospirae_57_13_curated
putative transcriptional regulator
GWD2_DPX3_57_8_gwd2_scaffold_397_26
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(24223..25431)
DNA (1209bp) protein (403aa)
NADH dehydrogenase (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit D id=4047784 bin=GWC2_Nitrospirae_57_13 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
NADH dehydrogenase (ubiquinone), D subunit Tax=GWC2_Nitrospirae_57_13_curated
GWD2_DPX3_57_8_gwd2_scaffold_397_27
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(25464..25934)
DNA (471bp) protein (157aa)
NADH-quinone oxidoreductase chain C (EC:1.6.99.5); K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] Tax=GWC2_Nitrospirae_57_13_curated
NADH-quinone oxidoreductase subunit c (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit C id=1968735 bin=GWD2_Nitrospirae-related_57_8 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
GWD2_DPX3_57_8_gwd2_scaffold_397_28
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(25984..26463)
DNA (480bp) protein (160aa)
NADH dehydrogenase subunit b (EC:1.6.5.3 1.6.99.5); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] Tax=GWC2_Nitrospirae_57_13_curated
NADH dehydrogenase subunit b (EC:1.6.5.3 1.6.99.5)
NADH-quinone oxidoreductase subunit B id=4047786 bin=GWC2_Nitrospirae_57_13 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
GWD2_DPX3_57_8_gwd2_scaffold_397_29
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(26454..26828)
DNA (375bp) protein (125aa)
NADH-quinone oxidoreductase subunit A id=1968739 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
NADH dehydrogenase (ubiquinone), subunit A Tax=GWC2_Nitrospirae_57_13_curated
NADH dehydrogenase (ubiquinone), subunit A
GWD2_DPX3_57_8_gwd2_scaffold_397_30
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

27075..27698
DNA (624bp) protein (208aa)
Putative uncharacterized protein id=1968741 bin=GWD2_Nitrospirae-related_57_8 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
hypothetical protein Tax=GWC2_Nitrospirae_57_13_curated
hypothetical protein
Displaying items 1-30 of 45 in total

View Taxonomy