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GWD2_DPX3_57_8_gwd2_scaffold_6765

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_DPX3_57_8_gwd2_scaffold_6765_1
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

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227..475
DNA (249bp) protein (83aa)
id=2088255 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
id=2088255 Tax=GWC2_Nitrospirae_57_13_curated
GWD2_DPX3_57_8_gwd2_scaffold_6765_2
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

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484..1038
DNA (555bp) protein (185aa)
id=2088256 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
id=4511036 Tax=GWC2_Nitrospirae_57_13_curated
GWD2_DPX3_57_8_gwd2_scaffold_6765_trna_1
unknown

Not on your lists

1535..1606
DNA (72bp)
transferRNA
GWD2_DPX3_57_8_gwd2_scaffold_6765_3
RBG_13_Aminicenantes_63_10_curated, Aminicenantes, Bacteria

Not on your lists

comp(1626..2561)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:115 RepID=R5LGN9_9FIRM
Uncharacterized protein Tax=RBG_13_Aminicenantes_63_10_curated
GWD2_DPX3_57_8_gwd2_scaffold_6765_4
unknown

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comp(3099..3191)
DNA (93bp) protein (31aa)

This feature has no annotations

GWD2_DPX3_57_8_gwd2_scaffold_6765_5
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

3621..4115
DNA (495bp) protein (165aa)
Translation initiation factor IF-3 id=2088258 bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
infC; translation initiation factor IF-3 Tax=GWC2_Nitrospirae_57_13_curated
translation initiation factor IF-3
GWD2_DPX3_57_8_gwd2_scaffold_6765_6
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists


4281..4481
DNA (201bp) protein (67aa)
50S ribosomal protein L35 id=4511039 bin=GWC2_Nitrospirae_57_13 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
50S ribosomal protein L35; K02916 large subunit ribosomal protein L35 Tax=GWC2_Nitrospirae_57_13_curated
50S ribosomal protein L35
GWD2_DPX3_57_8_gwd2_scaffold_6765_7
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists


4586..5173
DNA (588bp) protein (196aa)
50S ribosomal protein L20 id=4511040 bin=GWC2_Nitrospirae_57_13 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 Tax=GWC2_Nitrospirae_57_13_curated
50S ribosomal protein L20
GWD2_DPX3_57_8_gwd2_scaffold_6765_8
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

5142..6782
DNA (1641bp) protein (547aa)
cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] Tax=GWC2_Nitrospirae_57_13_curated
Cell wall hydrolase/autolysin id=2088261 bin=GWD2_Nitrospirae-related_57_8 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
cell wall hydrolase/autolysin
GWD2_DPX3_57_8_gwd2_scaffold_6765_9
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(6827..7900)
DNA (1074bp) protein (358aa)
Peptide chain release factor 2 id=2088262 bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
prfB; peptide chain release factor 2; K02836 peptide chain release factor 2 Tax=GWC2_Nitrospirae_57_13_curated
prfB; peptide chain release factor 2
GWD2_DPX3_57_8_gwd2_scaffold_6765_10
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(8260..9828)
DNA (1569bp) protein (523aa)
lnt; apolipoprotein N-acyltransferase (EC:2.3.1.-); K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] Tax=GWC2_Nitrospirae_57_13_curated
lnt; apolipoprotein N-acyltransferase (EC:2.3.1.-)
Apolipoprotein N-acyltransferase id=2088263 bin=GWD2_Nitrospirae-related_57_8 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
GWD2_DPX3_57_8_gwd2_scaffold_6765_11
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(9830..10252)
DNA (423bp) protein (141aa)
Protein hfq id=2088264 bin=GWD2_Nitrospirae-related_57_8 species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
Protein hfq Tax=GWC2_Nitrospirae_57_13_curated
GWD2_DPX3_57_8_gwd2_scaffold_6765_12
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(10262..10870)
DNA (609bp) protein (203aa)
RNA chaperone Hfq id=2088265 bin=GWD2_Nitrospirae-related_57_8 species=Denitrovibrio acetiphilus genus=Denitrovibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
RNA chaperone Hfq; K03666 host factor-I protein Tax=GWC2_Nitrospirae_57_13_curated
RNA chaperone Hfq
GWD2_DPX3_57_8_gwd2_scaffold_6765_trna_2
unknown

Not on your lists

10871..10942
DNA (72bp)
transferRNA
GWD2_DPX3_57_8_gwd2_scaffold_6765_13
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

11499..13388
DNA (1890bp) protein (630aa)
LigC protein id=4511046 bin=GWC2_Nitrospirae_57_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
LigC protein Tax=GWC2_Nitrospirae_57_13_curated
YVTN beta-propeller repeat-containing protein
GWD2_DPX3_57_8_gwd2_scaffold_6765_14
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

13870..14418
DNA (549bp) protein (183aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5); K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=GWC2_Nitrospirae_57_13_curat
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase id=2088268 bin=GWD2_Nitrospirae-related_57_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
Displaying 16 items

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