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GWD2_DPX3_57_9_gwd2_scaffold_3375

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_DPX3_57_9_gwd2_scaffold_3375_1
unknown

Not on your lists

comp(1..87)
DNA (87bp) protein (29aa)

This feature has no annotations

GWD2_DPX3_57_9_gwd2_scaffold_3375_2
RBG_19FT_COMBO_Nitrospirae_55_12_curated, Nitrospirae, Bacteria

Not on your lists

540..1184
DNA (645bp) protein (215aa)
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated
Putative uncharacterized protein id=3437536 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
GWD2_DPX3_57_9_gwd2_scaffold_3375_3
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1236..1898
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M528_GEODF
hypothetical protein Tax=CG_Delta_06
hypothetical protein
GWD2_DPX3_57_9_gwd2_scaffold_3375_4
RBG_19FT_COMBO_Nitrospirae_55_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(2118..2549)
DNA (432bp) protein (144aa)
id=3719966 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
TPR repeat protein Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated
GWD2_DPX3_57_9_gwd2_scaffold_3375_5
RBG_19FT_COMBO_Nitrospirae_55_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(2546..3478)
DNA (933bp) protein (311aa)
Diguanylate cyclase id=3719964 bin=GWC2_Nitrospirae-rel_56_14 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
diguanylate cyclase Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated
diguanylate cyclase
GWD2_DPX3_57_9_gwd2_scaffold_3375_6
unknown

Not on your lists

3635..3901
DNA (267bp) protein (89aa)

This feature has no annotations

GWD2_DPX3_57_9_gwd2_scaffold_3375_7
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(3993..6002)
DNA (2010bp) protein (670aa)
pbpA4; penicillin-binding protein 1A PbpA4 (EC:2.4.1.129) Tax=GWC2_Nitrospirae_57_9_curated
Multimodular transpeptidase-transglycosylase id=4189553 bin=GWC2_Nitrospirae_57_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
multimodular transpeptidase-transglycosylase
GWD2_DPX3_57_9_gwd2_scaffold_3375_8
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

6169..6699
DNA (531bp) protein (177aa)
cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17)
BtuR; ATP:corrinoid adenosyltransferase Tax=GWC2_Nitrospirae_57_9_curated
Cob(I)alamin adenosyltransferase id=2002235 bin=GWD2_Nitrospirae-related_57_8 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
GWD2_DPX3_57_9_gwd2_scaffold_3375_9
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

6764..7735
DNA (972bp) protein (324aa)
phoL; phoH-like protein; K06217 phosphate starvation-inducible protein PhoH and related proteins Tax=GWC2_Nitrospirae_57_9_curated
PhoH-like protein id=4810163 bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
phoL; phoH-like protein
GWD2_DPX3_57_9_gwd2_scaffold_3375_10
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

7722..9512
DNA (1791bp) protein (597aa)
HD domain protein; K07037 Tax=GWC2_Nitrospirae_57_9_curated
Metal dependent phosphohydrolase id=4810161 bin=GWC2_Nitrospirae-rel_56_14 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
HD domain-containing protein
GWD2_DPX3_57_9_gwd2_scaffold_3375_11
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

9550..9849
DNA (300bp) protein (100aa)
hypothetical protein; K07042 probable rRNA maturation factor Tax=GWC2_Nitrospirae_57_9_curated
Probable rRNA maturation factor id=4810159 bin=GWC2_Nitrospirae-rel_56_14 species=Desulfobacter postgatei genus=Desulfobacter taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
GWD2_DPX3_57_9_gwd2_scaffold_3375_12
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

9846..10547
DNA (702bp) protein (234aa)
diacylglycerol kinase; K00901 diacylglycerol kinase [EC:2.7.1.107] Tax=GWC2_Nitrospirae_57_9_curated
Diacylglycerol kinase id=4810157 bin=GWC2_Nitrospirae-rel_56_14 species=Alkaliphilus oremlandii genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
diacylglycerol kinase
GWD2_DPX3_57_9_gwd2_scaffold_3375_13
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

10602..10955
DNA (354bp) protein (118aa)
id=2002267 Tax=GWC2_Nitrospirae_57_9_curated
id=2002267 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
GWD2_DPX3_57_9_gwd2_scaffold_3375_14
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(10976..11935)
DNA (960bp) protein (320aa)
acetyl-CoA carboxylase carboxyltransferase subunit alpha; K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] Tax=GWC2_Nitrospirae_57_9_curated
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha id=4810153 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
acetyl-CoA carboxylase carboxyltransferase subunit alpha
GWD2_DPX3_57_9_gwd2_scaffold_3375_trna_1
unknown

Not on your lists

comp(12489..12574)
DNA (86bp)
transferRNA
GWD2_DPX3_57_9_gwd2_scaffold_3375_15
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(12692..12865)
DNA (174bp) protein (58aa)
hypothetical protein Tax=GWC2_Nitrospirae_57_9_curated
Conserved domain protein id=2002273 bin=GWD2_Nitrospirae-related_57_8 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
GWD2_DPX3_57_9_gwd2_scaffold_3375_16
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

13073..14080
DNA (1008bp) protein (336aa)
glycosyl transferase family protein; K02843 heptosyltransferase II [EC:2.4.-.-] Tax=GWC2_Nitrospirae_57_9_curated
Glycosyl transferase family 9 id=4810149 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
glycosyl transferase family protein
GWD2_DPX3_57_9_gwd2_scaffold_3375_17
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

14071..14910
DNA (840bp) protein (280aa)
hypothetical protein Tax=GWC2_Nitrospirae_57_9_curated
Uncharacterized protein id=4810147 bin=GWC2_Nitrospirae-rel_56_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
GWD2_DPX3_57_9_gwd2_scaffold_3375_18
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

14867..15859
DNA (993bp) protein (331aa)
rfaEa; d-beta-d-heptose 7-phosphate kinase (EC:2.7.1.-) Tax=GWC2_Nitrospirae_57_9_curated
rfaEa; d-beta-d-heptose 7-phosphate kinase (EC:2.7.1.-)
Carbohydrate kinase, PfkB id=4810145 bin=GWC2_Nitrospirae-rel_56_14 species=Leptospirillum ferrodiazotrophum genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
GWD2_DPX3_57_9_gwd2_scaffold_3375_19
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

15952..16845
DNA (894bp) protein (298aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] Tax=GWC2_Nitrospirae_57_9_curated
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase id=4536160 bin=GWC2_Nitrospirae_57_13 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
GWD2_DPX3_57_9_gwd2_scaffold_3375_20
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

16835..17389
DNA (555bp) protein (185aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=GWC2_Nitrospirae_57_9_curated
putative dTDP-4-deoxyrhamnose 3,5 epimerase
dTDP-4-deoxyrhamnose 3,5 epimerase id=3643101 bin=GWC2_Deltaproteobacteria_42_51 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
GWD2_DPX3_57_9_gwd2_scaffold_3375_21
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

17397..18242
DNA (846bp) protein (282aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] Tax=GWC2_Nitrospirae_57_9_curated
dTDP-4-dehydrorhamnose reductase id=4536164 bin=GWC2_Nitrospirae_57_13 species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
dTDP-4-dehydrorhamnose reductase
GWD2_DPX3_57_9_gwd2_scaffold_3375_22
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

18247..18471
DNA (225bp) protein (75aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=GWC2_Nitrospirae_57_9_curated
GWD2_DPX3_57_9_gwd2_scaffold_3375_23
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

18468..19358
DNA (891bp) protein (297aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=GWC2_Nitrospirae_57_9_curated
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase id=4536166 bin=GWC2_Nitrospirae_57_13 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
GWD2_DPX3_57_9_gwd2_scaffold_3375_24
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

19475..20677
DNA (1203bp) protein (401aa)
ugd; UDP-glucose 6-dehydrogenase (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=GWC2_Nitrospirae_57_9_curated
UDP-glucose dehydrogenase id=4810143 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
ugd; UDP-glucose 6-dehydrogenase
GWD2_DPX3_57_9_gwd2_scaffold_3375_25
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

20706..21638
DNA (933bp) protein (311aa)
NAD-dependent epimerase/dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=GWC2_Nitrospirae_57_9_curated
NAD-dependent epimerase/dehydratase id=4810141 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
NAD-dependent dehydratase
GWD2_DPX3_57_9_gwd2_scaffold_3375_26
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

21819..22604
DNA (786bp) protein (262aa)
kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase; K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] Tax=GWC2_Nitrospirae_57_9_curated
3-deoxy-manno-octulosonate cytidylyltransferase id=1826406 bin=GWD2_Nitrospirae-related_57_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase
GWD2_DPX3_57_9_gwd2_scaffold_3375_27
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

22597..24249
DNA (1653bp) protein (551aa)
CTP synthase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=GWC2_Nitrospirae_57_9_curated
CTP synthase (EC:6.3.4.2)
CTP synthase id=4536175 bin=GWC2_Nitrospirae_57_13 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Displaying 28 items

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