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GWD2_DPX3_57_9_gwd2_scaffold_793

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_DPX3_57_9_gwd2_scaffold_793_1
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

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26..1555
DNA (1530bp) protein (510aa)
mechanosensitive ion channel MscS Tax=GWC2_Nitrospirae_57_9_curated
Mechanosensitive ion channel/cyclic nucleotide-binding domain protein id=4185739 bin=GWC2_Nitrospirae-rel_56_14 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
mechanosensitive ion channel MscS
GWD2_DPX3_57_9_gwd2_scaffold_793_2
unknown

Not on your lists

comp(1568..1828)
DNA (261bp) protein (87aa)

This feature has no annotations

GWD2_DPX3_57_9_gwd2_scaffold_793_3
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

2058..3680
DNA (1623bp) protein (541aa)
multi-sensor signal transduction histidine kinase; K07710 two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] Tax=GWC2_Nitrospirae_57_9_curated
Multi-sensor signal transduction histidine kinase id=4185736 bin=GWC2_Nitrospirae-rel_56_14 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
multi-sensor signal transduction histidine kinase
GWD2_DPX3_57_9_gwd2_scaffold_793_4
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

3646..5031
DNA (1386bp) protein (462aa)
Fis family transcriptional regulator Tax=GWC2_Nitrospirae_57_9_curated
Two component, sigma54 specific, transcriptional regulator, Fis family id=1753045 bin=GWD2_Nitrospirae-related_57_8 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
Fis family transcriptional regulator
GWD2_DPX3_57_9_gwd2_scaffold_793_5
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

5283..5543
DNA (261bp) protein (87aa)
id=4306445 Tax=GWC2_Nitrospirae_57_9_curated
id=4306445 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
GWD2_DPX3_57_9_gwd2_scaffold_793_6
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

5811..8147
DNA (2337bp) protein (779aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R26_RHOFD
hypothetical protein Tax=GWC2_Nitrospirae_57_9_curated
hypothetical protein
GWD2_DPX3_57_9_gwd2_scaffold_793_7
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

8329..9624
DNA (1296bp) protein (432aa)
hypothetical protein Tax=GWC2_Nitrospirae_57_9_curated
Uncharacterized protein id=4185725 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
GWD2_DPX3_57_9_gwd2_scaffold_793_8
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

9626..10069
DNA (444bp) protein (148aa)
cytochrome C family protein Tax=GWC2_Nitrospirae_57_9_curated
Lipoprotein cytochrome c id=1882923 bin=GWD2_Desulfuromonadales_54_10 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
cytochrome C family protein
GWD2_DPX3_57_9_gwd2_scaffold_793_9
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

10057..11019
DNA (963bp) protein (321aa)
cytochrome C family protein Tax=GWC2_Nitrospirae_57_9_curated
Cytochrome c, 15 heme-binding sites id=4142561 bin=GWC2_Geobacteraceae_55_20 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
cytochrome C family protein
GWD2_DPX3_57_9_gwd2_scaffold_793_10
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(11065..11247)
DNA (183bp) protein (61aa)
Tax=GWC2_Nitrospirae_57_9_curated
GWD2_DPX3_57_9_gwd2_scaffold_793_11
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

11608..14010
DNA (2403bp) protein (801aa)
hypothetical protein n=1 Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B6F8C8
hypothetical protein Tax=GWC2_Nitrospirae_57_9_curated
hypothetical protein
GWD2_DPX3_57_9_gwd2_scaffold_793_12
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

14087..14947
DNA (861bp) protein (287aa)
Tax=GWC2_Nitrospirae_57_9_curated
GWD2_DPX3_57_9_gwd2_scaffold_793_13
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

14944..16236
DNA (1293bp) protein (431aa)
hypothetical protein Tax=GWC2_Nitrospirae_57_9_curated
Uncharacterized protein id=4185725 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
GWD2_DPX3_57_9_gwd2_scaffold_793_14
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

16236..16679
DNA (444bp) protein (148aa)
Cytochrome c family protein n=1 Tax=Geobacter sp. (strain M21) RepID=C6E1M1_GEOSM
cytochrome C family protein Tax=GWC2_Nitrospirae_57_9_curated
lipoprotein cytochrome c
GWD2_DPX3_57_9_gwd2_scaffold_793_15
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

16667..17101
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WMH8_GEOS8
cytochrome C family protein Tax=GWC2_Nitrospirae_57_9_curated
hypothetical protein
GWD2_DPX3_57_9_gwd2_scaffold_793_16
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(17535..18419)
DNA (885bp) protein (295aa)
argB; acetylglutamate kinase; K00930 acetylglutamate kinase [EC:2.7.2.8] Tax=GWC2_Nitrospirae_57_9_curated
acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase id=4185667 bin=GWC2_Nitrospirae-rel_56_14 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
GWD2_DPX3_57_9_gwd2_scaffold_793_17
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(18564..19907)
DNA (1344bp) protein (448aa)
hslU; heat shock protein HslVU, ATPase subunit HslU; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU Tax=GWC2_Nitrospirae_57_9_curated
ATP-dependent protease ATPase subunit HslU id=4185665 bin=GWC2_Nitrospirae-rel_56_14 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hslU; heat shock protein HslVU ATPase subunit HslU
GWD2_DPX3_57_9_gwd2_scaffold_793_18
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(19990..20532)
DNA (543bp) protein (181aa)
ATP-dependent protease peptidase subunit; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] Tax=GWC2_Nitrospirae_57_9_curated
ATP-dependent protease subunit HslV id=4740788 bin=GWC2_Nitrospirae_57_13 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
ATP-dependent protease peptidase subunit
GWD2_DPX3_57_9_gwd2_scaffold_793_19
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(20590..21477)
DNA (888bp) protein (296aa)
Tyrosine recombinase XerC id=3420474 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
tyrosine recombinase XerC; K03733 integrase/recombinase XerC Tax=GWC2_Nitrospirae_56_14_curated
tyrosine recombinase XerC
GWD2_DPX3_57_9_gwd2_scaffold_793_20
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(21657..23957)
DNA (2301bp) protein (767aa)
putative DNA protecting protein DprA/DNA topoisomerase I; K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=GWC2_Nitrospirae_57_9_curated
DNA topoisomerase id=4740786 bin=GWC2_Nitrospirae_57_13 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
putative DNA protecting protein DprA/DNA topoisomerase I
GWD2_DPX3_57_9_gwd2_scaffold_793_21
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(24037..24525)
DNA (489bp) protein (163aa)
id=3420476 Tax=GWC2_Nitrospirae_57_9_curated
id=3420476 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
GWD2_DPX3_57_9_gwd2_scaffold_793_22
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(24537..25637)
DNA (1101bp) protein (367aa)
DNA protecting protein DprA; K04096 DNA processing protein Tax=GWC2_Nitrospirae_57_9_curated
DNA protecting protein DprA id=3420477 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
DNA protecting protein DprA
GWD2_DPX3_57_9_gwd2_scaffold_793_23
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(25887..26297)
DNA (411bp) protein (137aa)
Tax=GWC2_Nitrospirae_57_9_curated
GWD2_DPX3_57_9_gwd2_scaffold_793_24
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(26588..27223)
DNA (636bp) protein (212aa)
nth; endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] Tax=GWC2_Nitrospirae_57_9_curated
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III id=4056060 bin=GWC2_Nitrospirae-rel_56_14 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
GWD2_DPX3_57_9_gwd2_scaffold_793_25
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(27202..27945)
DNA (744bp) protein (248aa)
hypothetical protein Tax=GWC2_Nitrospirae_57_9_curated
SNARE associated Golgi protein-like protein id=3693247 bin=GWF2_Planctomycetes_50_10 species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
hypothetical protein
GWD2_DPX3_57_9_gwd2_scaffold_793_26
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(27938..28750)
DNA (813bp) protein (271aa)
cytoplasmic protein; K09931 hypothetical protein Tax=GWC2_Nitrospirae_57_9_curated
Putative uncharacterized protein id=3529709 bin=GWF2_Syntrophobacterales_56_9 species=Desulfovibrio desulfuricans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
cytoplasmic protein
GWD2_DPX3_57_9_gwd2_scaffold_793_27
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

28793..29023
DNA (231bp) protein (77aa)
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=GWC2_Nitrospirae_57_9_curated
infA; translation initiation factor IF-1
Translation initiation factor IF-1 id=4795534 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
GWD2_DPX3_57_9_gwd2_scaffold_793_28
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(29035..29778)
DNA (744bp) protein (248aa)
hypothetical protein Tax=GWC2_Nitrospirae_57_9_curated
Putative uncharacterized protein id=4959214 bin=GWC2_Nitrospirae-rel_56_14 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
GWD2_DPX3_57_9_gwd2_scaffold_793_29
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(29775..30188)
DNA (414bp) protein (138aa)
cell wall biogenesis glycosyltransferase (EC:2.4.-.-); K00786 [EC:2.4.-.-] Tax=GWC2_Nitrospirae_57_9_curated
cell wall biogenesis glycosyltransferase (EC:2.4.-.-)
Glycosyltransferase involved in cell wall biogenesis id=4959213 bin=GWC2_Nitrospirae-rel_56_14 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Displaying 29 items

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