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GWD2_DPX3_57_9_gwd2_scaffold_3365

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_DPX3_57_9_gwd2_scaffold_3365_1
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

2..640
DNA (639bp) protein (213aa)
Putative PAS/PAC sensor protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q126X6_POLSJ
putative PAS/PAC sensor protein
PAS domain S-box Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
GWD2_DPX3_57_9_gwd2_scaffold_3365_2
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1451..1813
DNA (363bp) protein (121aa)
Sensor histidine kinase, CHASE domain-containing n=2 Tax=Geobacter metallireducens RepID=Q39RZ4_GEOMG
multi-sensor signal transduction histidine kinase Tax=GWC2_Geobacteraceae_58_44_curated
histidine kinase
GWD2_DPX3_57_9_gwd2_scaffold_3365_3
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1840..2301
DNA (462bp) protein (154aa)
Response regulator receiver protein n=1 Tax=Methylomonas methanica (strain MC09) RepID=F9ZYI4_METMM
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:AEG02256.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methy
GWD2_DPX3_57_9_gwd2_scaffold_3365_4
unknown

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2973..4067
DNA (1095bp) protein (365aa)

This feature has no annotations

GWD2_DPX3_57_9_gwd2_scaffold_3365_5
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(3964..4926)
DNA (963bp) protein (321aa)
transketolase; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] Tax=GWC2_Nitrospirae_57_9_curated
Transketolase, central region id=4044462 bin=GWF2_Nitrospirae_44_13 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
2-oxoisovalerate dehydrogenase
GWD2_DPX3_57_9_gwd2_scaffold_3365_6
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(4928..5980)
DNA (1053bp) protein (351aa)
pyruvate dehydrogenase (EC:1.2.4.1); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] Tax=GWC2_Nitrospirae_57_9_curated
Pyruvate dehydrogenase (Acetyl-transferring) id=1703019 bin=GWB2_Nitrospirae_rel_47_37 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
pyruvate dehydrogenase
GWD2_DPX3_57_9_gwd2_scaffold_3365_7
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

6282..6743
DNA (462bp) protein (154aa)
Uncharacterized protein Tax=GWC2_Nitrospirae_57_9_curated
Uncharacterized protein id=2101117 bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
GWD2_DPX3_57_9_gwd2_scaffold_3365_8
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

6743..7162
DNA (420bp) protein (140aa)
thiol-disulfide oxidoreductase DCC
Putative uncharacterized protein Tax=GWC2_Nitrospirae_57_9_curated
Putative uncharacterized protein id=4607608 bin=GWC2_Deltaproteobacteria_66_88 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
GWD2_DPX3_57_9_gwd2_scaffold_3365_9
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

7188..7901
DNA (714bp) protein (238aa)
ATP:corrinoid adenosyltransferase (EC:2.5.1.17) Tax=RBG_13_Nitrospirae_43_8_curated
cob(I)alamin adenosyltransferase (EC:2.5.1.17)
Cob(I)alamin adenosyltransferase n=1 Tax=Geobacter sp. (strain M18) RepID=E8WM52_GEOS8
GWD2_DPX3_57_9_gwd2_scaffold_3365_10
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

7950..9149
DNA (1200bp) protein (400aa)
PAS domain S-box protein Tax=GWC2_Nitrospirae_57_9_curated
PAS domain S-box id=1880778 bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
sensory box protein
GWD2_DPX3_57_9_gwd2_scaffold_3365_11
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(9389..9583)
DNA (195bp) protein (65aa)
Putative oxidoreductase n=1 Tax=Gordonia polyisoprenivorans NBRC 16320 RepID=H0RDH5_9ACTO
zinc-dependent oxidoreductase Tax=GWC2_Nitrospirae_57_9_curated
putative zinc-binding oxidoreductase
GWD2_DPX3_57_9_gwd2_scaffold_3365_12
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

9880..10335
DNA (456bp) protein (152aa)
peptidoglycan binding domain-containing protein Tax=GWC2_Nitrospirae_57_9_curated
Carboxyl-terminal protease id=3242203 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Bacillus cereus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
peptidoglycan binding domain-containing protein
GWD2_DPX3_57_9_gwd2_scaffold_3365_13
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10823..11239)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P795_DESSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF77562.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa s
GWD2_DPX3_57_9_gwd2_scaffold_3365_14
RBG_13_Spirochaetes_51_14_curated, Spirochaetes, Bacteria

Not on your lists

comp(11443..11691)
DNA (249bp) protein (83aa)
hypothetical protein Tax=RBG_13_Spirochaetes_51_14_curated
Putative uncharacterized protein id=4026323 bin=GWB1_CP_36_13 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
hypothetical protein
GWD2_DPX3_57_9_gwd2_scaffold_3365_15
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12206..12442)
DNA (237bp) protein (79aa)
hypothetical protein Tax=GWC2_Deltaproteobacteria_55_46b_curated
GWD2_DPX3_57_9_gwd2_scaffold_3365_16
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12729..13829)
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037EED10
Geranylgeranyl reductase {ECO:0000313|EMBL:GAO35088.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp.
geranylgeranyl reductase
GWD2_DPX3_57_9_gwd2_scaffold_3365_17
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14061..14984)
DNA (924bp) protein (308aa)
cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79) Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037FFD95
cyclopropane-fatty-acyl-phospholipid synthase
Displaying 17 items

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