ggKbase home page

GWD2_ELX_63_28_gwd2_scaffold_2062

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_ELX_63_28_gwd2_scaffold_2062_1
GWD2_Elusimicrobia_63_28_curated, Elusimicrobia, Bacteria

Not on your lists

1..1545
DNA (1545bp) protein (515aa)
ccrB; cassette chromosome recombinase B Tax=GWD2_Elusimicrobia_63_28_curated
Cassette chromosome recombinase B id=2272949 bin=GWB2_Elusimicrobia_63_16 species=Clostridium perfringens genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
DNA recombinase
GWD2_ELX_63_28_gwd2_scaffold_2062_2
GWD2_Elusimicrobia_63_28_curated, Elusimicrobia, Bacteria

Not on your lists

1542..2750
DNA (1209bp) protein (403aa)
MiaB family RNA modification protein; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA Tax=GWD2_Elusimicrobia_63_28_curated
RNA modification enzyme, MiaB family id=5032078 bin=GWA2_Elusi-like_A8_64_40 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusi-like_A8_64_40 organism_group=Elusimicrobia
MiaB family RNA modification protein
GWD2_ELX_63_28_gwd2_scaffold_2062_3
GWD2_Elusimicrobia_63_28_curated, Elusimicrobia, Bacteria

Not on your lists

2747..3229
DNA (483bp) protein (161aa)
type IV pilus assembly PilZ Tax=GWD2_Elusimicrobia_63_28_curated
Type IV pilus assembly PilZ id=1758949 bin=GWB2_Elusimicrobium_63_22 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
type IV pilus assembly PilZ
GWD2_ELX_63_28_gwd2_scaffold_2062_4
GWD2_Elusimicrobia_63_28_curated, Elusimicrobia, Bacteria

Not on your lists

3382..4311
DNA (930bp) protein (310aa)
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=GWD2_Elusimicrobia_63_28_curated
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase id=2717093 bin=GWC2_Elusimicrobia_64_44 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
GWD2_ELX_63_28_gwd2_scaffold_2062_5
GWD2_Elusimicrobia_63_28_curated, Elusimicrobia, Bacteria

Not on your lists

4308..5552
DNA (1245bp) protein (415aa)
GTP-binding protein; K03665 GTP-binding protein HflX Tax=GWD2_Elusimicrobia_63_28_curated
GTPase HflX id=2717094 bin=GWC2_Elusimicrobia_64_44 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
GTP-binding protein
GWD2_ELX_63_28_gwd2_scaffold_2062_6
GWD2_Elusimicrobia_63_28_curated, Elusimicrobia, Bacteria

Not on your lists

5574..6239
DNA (666bp) protein (222aa)
hypothetical protein; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=GWD2_Elusimicrobia_63_28_curated
Glycerol-3-phosphate acyltransferase id=1758955 bin=GWB2_Elusimicrobium_63_22 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
hypothetical protein
GWD2_ELX_63_28_gwd2_scaffold_2062_7
GWD2_Elusimicrobia_63_28_curated, Elusimicrobia, Bacteria

Not on your lists

6236..6832
DNA (597bp) protein (199aa)
hypothetical protein; K08999 hypothetical protein Tax=GWD2_Elusimicrobia_63_28_curated
Putative uncharacterized protein id=2717102 bin=GWC2_Elusimicrobia_64_44 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
GWD2_ELX_63_28_gwd2_scaffold_2062_8
GWD2_Elusimicrobia_63_28_curated, Elusimicrobia, Bacteria

Not on your lists

6825..7091
DNA (267bp) protein (89aa)
integration host factor alpha subunit ; K03530 DNA-binding protein HU-beta Tax=GWD2_Elusimicrobia_63_28_curated
Integration host factor alpha subunit id=2272942 bin=GWB2_Elusimicrobia_63_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
integration host factor alpha subunit
GWD2_ELX_63_28_gwd2_scaffold_2062_9
GWD2_Elusimicrobia_63_28_curated, Elusimicrobia, Bacteria

Not on your lists

7091..7429
DNA (339bp) protein (113aa)
putative transcriptional regulator Tax=GWD2_Elusimicrobia_63_28_curated
Putative transcriptional regulator id=2717113 bin=GWC2_Elusimicrobia_64_44 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
putative transcriptional regulator
GWD2_ELX_63_28_gwd2_scaffold_2062_trna_1
unknown

Not on your lists

7523..7594
DNA (72bp)
transferRNA
GWD2_ELX_63_28_gwd2_scaffold_2062_10
GWD2_Elusimicrobia_63_28_curated, Elusimicrobia, Bacteria

Not on your lists

7690..8877
DNA (1188bp) protein (396aa)
proteinase inhibitor I4 serpin; K13963 serpin B Tax=GWD2_Elusimicrobia_63_28_curated
Proteinase inhibitor I4 serpin id=2717117 bin=GWC2_Elusimicrobia_64_44 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
proteinase inhibitor I4 serpin
GWD2_ELX_63_28_gwd2_scaffold_2062_11
GWD2_Elusimicrobia_63_28_curated, Elusimicrobia, Bacteria

Not on your lists

comp(8878..9081)
DNA (204bp) protein (68aa)
CopZ; copper chaperone; K07213 copper chaperone Tax=GWD2_Elusimicrobia_63_28_curated
mercuric ion-binding protein id=2272939 bin=GWB2_Elusimicrobia_63_16 species=Gluconacetobacter europaeus genus=Gluconacetobacter taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
copper ion binding protein
GWD2_ELX_63_28_gwd2_scaffold_2062_12
GWD2_Elusimicrobia_63_28_curated, Elusimicrobia, Bacteria

Not on your lists

9158..9613
DNA (456bp) protein (152aa)
ferric uptake regulator, Fur family; K09825 Fur family transcriptional regulator, peroxide stress response regulator Tax=GWD2_Elusimicrobia_63_28_curated
Fe2+/Zn2+ uptake regulation proteins id=2717126 bin=GWC2_Elusimicrobia_64_44 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
Fe2+/Zn2+ uptake regulation protein
GWD2_ELX_63_28_gwd2_scaffold_2062_13
GWD2_Elusimicrobia_63_28_curated, Elusimicrobia, Bacteria

Not on your lists

9589..10200
DNA (612bp) protein (204aa)
alkyl hydroperoxide reductase; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15] Tax=GWD2_Elusimicrobia_63_28_curated
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen id=2717131 bin=GWC2_Elusimicrobia_64_44 species=unknown genus=Sulfurihydrogenibium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
alkyl hydroperoxide reductase
GWD2_ELX_63_28_gwd2_scaffold_2062_14
GWD2_Elusimicrobia_63_28_curated, Elusimicrobia, Bacteria

Not on your lists

10292..11428
DNA (1137bp) protein (379aa)
hypothetical protein Tax=GWD2_Elusimicrobia_63_28_curated
Diacylglycerol glucosyltransferase id=2717345 bin=GWC2_Elusimicrobia_64_44 species=uncultured bacterium CSLF42 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
GWD2_ELX_63_28_gwd2_scaffold_2062_trna_2
unknown

Not on your lists

11502..11575
DNA (74bp)
transferRNA
GWD2_ELX_63_28_gwd2_scaffold_2062_15
GWD2_Elusimicrobia_63_28_curated, Elusimicrobia, Bacteria

Not on your lists

11708..11986
DNA (279bp) protein (93aa)
hypothetical protein Tax=GWD2_Elusimicrobia_63_28_curated
Acylphosphatase id=2272935 bin=GWB2_Elusimicrobia_63_16 species=Botryotinia fuckeliana genus=Botryotinia taxon_order=Helotiales taxon_class=Leotiomycetes phylum=Ascomycota tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
acylphosphatase
GWD2_ELX_63_28_gwd2_scaffold_2062_16
GWD2_Elusimicrobia_63_28_curated, Elusimicrobia, Bacteria

Not on your lists

12001..12342
DNA (342bp) protein (114aa)
DNA-directed RNA polymerase sigma subunit RpoH; K03086 RNA polymerase primary sigma factor Tax=GWD2_Elusimicrobia_63_28_curated
RNA polymerase sigma factor id=2272934 bin=GWB2_Elusimicrobia_63_16 species=uncultured bacterium CSLF42 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
DNA-directed RNA polymerase sigma subunit RpoH
Displaying 18 items

View Taxonomy