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GWD2_RBX1_39_127_gwd2_scaffold_101

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Displaying items 1-30 of 146 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_101_1
R_OD1_Falkowbacteria_47_11b, Falkowbacteria, Parcubacteria, Bacteria

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comp(2..385)
DNA (384bp) protein (128aa)
dehydratase-like protein; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] id=24609584 bin=RAAC11 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
hypothetical protein; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_47_11b_curated
dehydratase-like protein
GWD2_RBX1_39_127_gwd2_scaffold_101_2
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

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comp(509..1216)
DNA (708bp) protein (236aa)
Cytidylyltransferase id=24609583 bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
Cytidylyltransferase Tax=GWB2_Nitrospirae_47_37_curated
Cytidylyltransferase
GWD2_RBX1_39_127_gwd2_scaffold_101_3
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

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comp(1217..2143)
DNA (927bp) protein (309aa)
DAHP synthetase I/KDSA id=1733490 bin=GWD2_RBX1-related_39_127 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
DAHP synthetase I/KDSA Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
DAHP synthetase I/KDSA
GWD2_RBX1_39_127_gwd2_scaffold_101_4

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comp(2169..2960)
DNA (792bp) protein (264aa)
5-deoxy-glucuronate isomerase id=1733492 bin=GWD2_RBX1-related_39_127 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Marine sediment metagenome DNA, contig: S01H1_S19420 {ECO:0000313|EMBL:GAG19501.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
myo-inositol catabolism protein
GWD2_RBX1_39_127_gwd2_scaffold_101_5
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2976..3782)
DNA (807bp) protein (269aa)
Xylose isomerase domain-containing protein TIM barrel id=1733511 bin=GWD2_RBX1-related_39_127 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
xylose isomerase domain-containing protein
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AEG15210.1}; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="
GWD2_RBX1_39_127_gwd2_scaffold_101_6
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

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comp(3779..5164)
DNA (1386bp) protein (462aa)
Glycosyl transferase family 2 id=1733513 bin=GWD2_RBX1-related_39_127 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
family 2 glycosyl transferase Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
family 2 glycosyl transferase
GWD2_RBX1_39_127_gwd2_scaffold_101_7
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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5430..7355
DNA (1926bp) protein (642aa)
Uncharacterized protein id=1733515 bin=GWD2_RBX1-related_39_127 species=Thermoanaerobacterium saccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein Tax=GWF2_Bacteroidetes_43_11_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_101_8
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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7414..8289
DNA (876bp) protein (292aa)
N-acetylneuraminate synthase (EC:2.5.1.56)
N-acetylneuraminic acid phosphate synthase id=1733517 bin=GWD2_RBX1-related_39_127 species=Methanosarcina acetivorans genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
N-acetylneuraminic acid phosphate synthase Tax=GWF2_Bacteroidetes_43_11_curated
GWD2_RBX1_39_127_gwd2_scaffold_101_9
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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8286..9422
DNA (1137bp) protein (379aa)
neuA; acylneuraminate cytidylyltransferase; K00983 N-acylneuraminate cytidylyltransferase [EC:2.7.7.43] Tax=GWF2_Bacteroidetes_43_11_curated
N-Acetylneuraminate cytidylyltransferase (EC:2.7.7.43)
Acylneuraminate cytidylyltransferase id=1733519 bin=GWD2_RBX1-related_39_127 species=Methanosarcina acetivorans genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_101_10
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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9479..10693
DNA (1215bp) protein (405aa)
hypothetical protein id=24609575 bin=RAAC11 species=Butyrivibrio sp. AE2015 genus=Butyrivibrio taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
hypothetical protein Tax=GWF2_Bacteroidetes_43_11_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_101_11
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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10810..11811
DNA (1002bp) protein (334aa)
Polysaccharide biosynthesis protein CapD id=1733523 bin=GWD2_RBX1-related_39_127 species=Methanococcoides burtonii genus=Methanococcoides taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
polysaccharide biosynthesis protein CapD Tax=GWF2_Bacteroidetes_43_11_curated
polysaccharide biosynthesis protein CapD
GWD2_RBX1_39_127_gwd2_scaffold_101_12
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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12124..12948
DNA (825bp) protein (275aa)
ATPase AAA; K07133 id=24609573 bin=RAAC11 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
ATPase AAA; K07133 Tax=GWF2_Bacteroidetes_43_11_curated
ATPase AAA
GWD2_RBX1_39_127_gwd2_scaffold_101_13
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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13066..13413
DNA (348bp) protein (116aa)
DNA polymerase beta domain-containing protein id=24609572 bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RAAC11 organism_group=Unknown_CP
DNA polymerase beta domain-containing protein Tax=GWF2_Bacteroidetes_43_11_curated
DNA polymerase beta domain-containing protein
GWD2_RBX1_39_127_gwd2_scaffold_101_14
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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13379..13759
DNA (381bp) protein (127aa)
HEPN domain-containing protein id=24609571 bin=RAAC11 species=Thermodesulfobacterium geofontis genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=RAAC11 organism_group=Unknown_CP
HEPN domain-containing protein Tax=GWF2_Bacteroidetes_43_11_curated
HEPN domain-containing protein
GWD2_RBX1_39_127_gwd2_scaffold_101_15
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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13861..16110
DNA (2250bp) protein (750aa)
Putative uncharacterized protein id=1733531 bin=GWD2_RBX1-related_39_127 species=Halanaerobium praevalens genus=Halanaerobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein Tax=GWF2_Bacteroidetes_43_11_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_101_16
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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16183..17253
DNA (1071bp) protein (357aa)
N-acetylneuraminate synthase id=1733533 bin=GWD2_RBX1-related_39_127 species=unknown genus=Maribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
N-acetylneuraminate synthase
N-acetylneuraminate synthase {ECO:0000313|EMBL:EAR02776.1}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribacter.;" source="Maribacter sp. (st
GWD2_RBX1_39_127_gwd2_scaffold_101_17
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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17246..17671
DNA (426bp) protein (142aa)
Putative uncharacterized protein id=1733535 bin=GWD2_RBX1-related_39_127 species=unknown genus=Maribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAR02775.1}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribacter.;" source="Maribacter sp. (strain
GWD2_RBX1_39_127_gwd2_scaffold_101_18
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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17675..18538
DNA (864bp) protein (288aa)
Putative uncharacterized protein id=1733537 bin=GWD2_RBX1-related_39_127 species=unknown genus=Maribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAR02775.1}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribacter.;" source="Maribacter sp. (strain
GWD2_RBX1_39_127_gwd2_scaffold_101_19
Sporosarcina newyorkensis, Sporosarcina, Bacillales, Bacilli, Firmicutes, Bacteria

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18541..19953
DNA (1413bp) protein (471aa)
DegT/DnrJ/EryC1/StrS aminotransferase id=1733539 bin=GWD2_RBX1-related_39_127 species=gamma proteobacterium SCGC AAA001-B15 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Spore coat polysaccharide biosynthesis protein SpsC {ECO:0000313|EMBL:EGQ27042.1}; TaxID=1027292 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Sporosarcina.;" source="Sporosarcin
DegT/DnrJ/EryC1/StrS aminotransferase
GWD2_RBX1_39_127_gwd2_scaffold_101_20
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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19966..20796
DNA (831bp) protein (277aa)
Methylase involved in ubiquinone/menaquinone biosynthesis id=1733541 bin=GWD2_RBX1-related_39_127 species=Joostella marina genus=Joostella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Uncharacterized protein {ECO:0000313|EMBL:EOS39526.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
GWD2_RBX1_39_127_gwd2_scaffold_101_21
Capnocytophaga sp. oral taxon 336, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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20806..21555
DNA (750bp) protein (250aa)
Putative uncharacterized protein id=1733543 bin=GWD2_RBX1-related_39_127 species=Capnocytophaga sp. oral taxon 332 genus=Capnocytophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
N-acylneuraminate cytidylyltransferase {ECO:0000313|EMBL:EPE01260.1}; TaxID=1203603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Cap
acylneuraminate cytidylyltransferase
GWD2_RBX1_39_127_gwd2_scaffold_101_22
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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21545..22858
DNA (1314bp) protein (438aa)
Class III aminotransferase id=1733545 bin=GWD2_RBX1-related_39_127 species=Methanobacterium formicicum genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Class III aminotransferase {ECO:0000313|EMBL:EKF86035.1}; TaxID=1204725 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanoba
putative glutamate-1-semialdehyde 2,1-aminomutase
GWD2_RBX1_39_127_gwd2_scaffold_101_23
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

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22873..23643
DNA (771bp) protein (257aa)
Short-chain dehydrogenase/reductase SDR id=1733547 bin=GWD2_RBX1-related_39_127 species=Sulfurimonas denitrificans genus=Sulfurimonas taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Flagellin modification protein A {ECO:0000313|EMBL:KIM05860.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
flagellin modification protein A
GWD2_RBX1_39_127_gwd2_scaffold_101_24
GWA1_OP11_34_13, Gottesmanbacteria, Microgenomates, Bacteria

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23653..24660
DNA (1008bp) protein (336aa)
Formyl transferase domain protein id=1733549 bin=GWD2_RBX1-related_39_127 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Formyl transferase domain protein Tax=GWA1_OP11_34_13
formyl transferase domain-containing protein
GWD2_RBX1_39_127_gwd2_scaffold_101_25
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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24678..25862
DNA (1185bp) protein (395aa)
LPS biosynthesis protein id=1733551 bin=GWD2_RBX1-related_39_127 species=Nitrobacter winogradskyi genus=Nitrobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
LPS biosynthesis protein
LPS biosynthesis protein {ECO:0000313|EMBL:ABA05646.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winograd
GWD2_RBX1_39_127_gwd2_scaffold_101_26
Deferribacter desulfuricans, Deferribacter, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

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25859..26488
DNA (630bp) protein (210aa)
hisH; amidotransferase HisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-
Imidazole glycerol phosphate synthase subunit HisH id=1733553 bin=GWD2_RBX1-related_39_127 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_101_27
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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26491..27267
DNA (777bp) protein (259aa)
histidine biosynthesis protein (EC:5.3.1.16)
Histidine biosynthesis id=1733555 bin=GWD2_RBX1-related_39_127 species=Nitrobacter winogradskyi genus=Nitrobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Uncharacterized protein {ECO:0000313|EMBL:KJC56273.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
GWD2_RBX1_39_127_gwd2_scaffold_101_28
GWF2_Gammaproteobacteria_41_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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27300..29126
DNA (1827bp) protein (609aa)
Putative uncharacterized protein id=1733556 bin=GWD2_RBX1-related_39_127 species=Methylomonas methanica genus=Methylomonas taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein Tax=GWF2_Gammaproteobacteria_41_13_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_101_29
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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29414..31045
DNA (1632bp) protein (544aa)
Methyltransferase type 12 id=1733557 bin=GWD2_RBX1-related_39_127 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
type 12 methyltransferase
Methyltransferase type 12 {ECO:0000313|EMBL:ABK99714.1}; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter prop
GWD2_RBX1_39_127_gwd2_scaffold_101_30
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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31084..32199
DNA (1116bp) protein (372aa)
Radical SAM domain protein id=1733558 bin=GWD2_RBX1-related_39_127 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
radical SAM protein
Radical SAM domain protein {ECO:0000313|EMBL:ACD97091.1}; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovley
Displaying items 1-30 of 146 in total

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