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GWD2_RBX1_39_127_gwd2_scaffold_310

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_310_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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358..1401
DNA (1044bp) protein (348aa)
id=1923685 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=2162228 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_310_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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1425..6587
DNA (5163bp) protein (1721aa)
tRNA-dihydrouridine synthase id=1923686 bin=GWD2_RBX1-related_39_127 species=Clostridium novyi genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
tRNA-dihydrouridine synthase Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_310_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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6708..8768
DNA (2061bp) protein (687aa)
id=1923687 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=4026413 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_310_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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8793..9101
DNA (309bp) protein (103aa)
id=2162231 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2162231 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_310_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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9468..11690
DNA (2223bp) protein (741aa)
4-alpha-glucanotransferase id=1923689 bin=GWD2_RBX1-related_39_127 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
4-alpha-glucanotransferase Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_310_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(11717..14311)
DNA (2595bp) protein (865aa)
glycogen debranching enzyme/alpha-amylase (EC:3.2.1.1); K01176 alpha-amylase [EC:3.2.1.1] Tax=GWF2_RBX1_38_17_curated
glycogen debranching enzyme/alpha-amylase (EC:3.2.1.1)
Amylo-alpha-16-glucosidase id=1923690 bin=GWD2_RBX1-related_39_127 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_310_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

14513..15751
DNA (1239bp) protein (413aa)
id=1923726 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=4026402 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_310_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

15738..16574
DNA (837bp) protein (279aa)
id=1923727 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=2162276 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_310_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(16613..18136)
DNA (1524bp) protein (508aa)
glycogen/starch synthase; K00703 starch synthase [EC:2.4.1.21] Tax=GWF2_RBX1_38_17_curated
glycogen/starch synthase (EC:2.4.1.21)
Glycogen synthase id=2162277 bin=GWE2_RBX1_39_32 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_310_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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18509..19786
DNA (1278bp) protein (426aa)
id=1923733 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=2162280 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_310_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

19957..22398
DNA (2442bp) protein (814aa)
id=1923734 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=2162281 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_310_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

22401..22712
DNA (312bp) protein (104aa)
id=24608760 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=2162282 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_310_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

23073..37994
DNA (14922bp) protein (4974aa)
id=1923738 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=1923738 Tax=GWF2_RBX1_38_17_curated
Displaying 13 items

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