ggKbase home page

GWD2_RBX1_39_127_gwd2_scaffold_1977

Search features with annotation key words

Displaying 15 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_1977_1
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(155..1261)
DNA (1107bp) protein (369aa)
ABC transporter-like protein; K10112 maltose/maltodextrin transport system ATP-binding protein id=24610291 bin=RAAC11 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
ABC transporter-like protein; K10112 maltose/maltodextrin transport system ATP-binding protein Tax=GWF2_Bacteroidetes_43_11_curated
ABC transporter-like protein
GWD2_RBX1_39_127_gwd2_scaffold_1977_2
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1289..1756)
DNA (468bp) protein (156aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:6.3.3.-); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] id=24610292 bin=RAAC11 species=Clostridium sporogenes genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:6.3.3.-); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] Tax=GWF2_Bacteroidetes_43_11_curated
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:6.3.3.-)
GWD2_RBX1_39_127_gwd2_scaffold_1977_3
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1879..3087)
DNA (1209bp) protein (403aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] id=24610293 bin=RAAC11 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
3,4-dihydroxy-2-butanone 4-phosphate synthase; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] Tax=GWF2_Bacteroidetes_43_11_curated
3,4-dihydroxy-2-butanone 4-phosphate synthase
GWD2_RBX1_39_127_gwd2_scaffold_1977_4
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3087..3722)
DNA (636bp) protein (212aa)
riboflavin synthase, subunit alpha; K00793 riboflavin synthase [EC:2.5.1.9] id=24610294 bin=RAAC11 species=Syntrophobotulus glycolicus genus=Syntrophobotulus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
riboflavin synthase, subunit alpha; K00793 riboflavin synthase [EC:2.5.1.9] Tax=GWF2_Bacteroidetes_43_11_curated
riboflavin synthase, subunit alpha (EC:2.5.1.9)
GWD2_RBX1_39_127_gwd2_scaffold_1977_5
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3788..4198)
DNA (411bp) protein (137aa)
N utilization substance protein B homolog id=1834897 bin=GWE2_RBX1_39_32 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
NusB antitermination factor; K03625 N utilization substance protein B Tax=GWF2_Bacteroidetes_43_11_curated
NusB antitermination factor
GWD2_RBX1_39_127_gwd2_scaffold_1977_6
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4205..5566)
DNA (1362bp) protein (454aa)
Acetyl/propionyl-CoA carboxylase, alpha subunit; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] id=24610296 bin=RAAC11 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
Acetyl/propionyl-CoA carboxylase, alpha subunit; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=GWF2_Bacteroidetes_43_11_curated
Acetyl/propionyl-CoA carboxylase, alpha subunit
GWD2_RBX1_39_127_gwd2_scaffold_1977_trna_4
unknown

Not on your lists

comp(5592..5665)
DNA (74bp)
transferRNA
GWD2_RBX1_39_127_gwd2_scaffold_1977_trna_3
unknown

Not on your lists

comp(5675..5747)
DNA (73bp)
transferRNA
GWD2_RBX1_39_127_gwd2_scaffold_1977_trna_2
unknown

Not on your lists

comp(5760..5833)
DNA (74bp)
transferRNA
GWD2_RBX1_39_127_gwd2_scaffold_1977_trna_1
unknown

Not on your lists

comp(5907..5979)
DNA (73bp)
transferRNA
GWD2_RBX1_39_127_gwd2_scaffold_1977_7
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6494..7081
DNA (588bp) protein (196aa)
DNA polymerase V subunit; K03503 DNA polymerase V [EC:3.4.21.-] Tax=GWF2_Bacteroidetes_43_11_curated
LexA repressor id=1845094 bin=GWD2_RBX1-related_39_127 species=uncultured bacterium W4-21b genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
DNA polymerase V subunit
GWD2_RBX1_39_127_gwd2_scaffold_1977_8
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7074..8318
DNA (1245bp) protein (415aa)
nucleotidyltransferase/DNA polymerase protein; K02346 DNA polymerase IV [EC:2.7.7.7] Tax=GWF2_Bacteroidetes_43_11_curated
DNA polymerase IV id=1845097 bin=GWD2_RBX1-related_39_127 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
DNA polymerase IV
GWD2_RBX1_39_127_gwd2_scaffold_1977_9
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8589..9380
DNA (792bp) protein (264aa)
Uncharacterized protein id=1845100 bin=GWD2_RBX1-related_39_127 species=Formosa sp. AK20 genus=Formosa taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Uncharacterized protein {ECO:0000313|EMBL:KGL59046.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_1977_10
unknown

Not on your lists

comp(9521..9658)
DNA (138bp) protein (46aa)
id=1845103 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=1845103 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_1977_11
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10319..11176
DNA (858bp) protein (286aa)
Leucine-rich-repeat protein id=1845104 bin=GWD2_RBX1-related_39_127 species=Leptospira interrogans genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein
Leucine-rich-repeat protein {ECO:0000313|EMBL:AAZ71230.1}; TaxID=269797 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcin
Displaying 15 items

View Taxonomy