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GWD2_RBX1_39_127_gwd2_scaffold_94

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Displaying items 1-30 of 74 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_94_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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572..2290
DNA (1719bp) protein (573aa)
methyl-accepting chemotaxis sensory transducer id=24608927 bin=RAAC11 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
methyl-accepting chemotaxis sensory transducer Tax=GWF2_RBX1_38_17_curated
methyl-accepting chemotaxis sensory transducer
GWD2_RBX1_39_127_gwd2_scaffold_94_2
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2666..4564
DNA (1899bp) protein (633aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromati
ATP-dependent zinc metalloprotease FtsH id=2148894 bin=GWD2_RBX1-related_39_127 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_94_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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4639..5544
DNA (906bp) protein (302aa)
hypothetical protein id=24608929 bin=RAAC11 species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=RAAC11 organism_group=Unknown_CP
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_94_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(5606..6655)
DNA (1050bp) protein (350aa)
MscS Mechanosensitive ion channel id=2121631 bin=GWE2_RBX1_39_32 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
mechanosensitive ion channel MscS Tax=GWF2_RBX1_38_17_curated
mechanosensitive ion channel MscS
GWD2_RBX1_39_127_gwd2_scaffold_94_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(6757..7827)
DNA (1071bp) protein (357aa)
Membrane protein DUF318 id=2121634 bin=GWE2_RBX1_39_32 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
permease; K07089 Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_94_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(7820..10039)
DNA (2220bp) protein (740aa)
UPI00020A9D29 related cluster id=2121638 bin=GWE2_RBX1_39_32 species=Thermodesulfobium narugense genus=Thermodesulfobium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
penicillin-binding protein Tax=GWF2_RBX1_38_17_curated
penicillin-binding protein
GWD2_RBX1_39_127_gwd2_scaffold_94_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

10414..11118
DNA (705bp) protein (235aa)
id=24608933 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24608933 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_94_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

11176..12600
DNA (1425bp) protein (475aa)
id=2121645 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2121645 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_94_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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12597..14132
DNA (1536bp) protein (512aa)
id=24608935 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=2121646 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_94_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(14134..14703)
DNA (570bp) protein (190aa)
Putative uncharacterized protein id=2148902 bin=GWD2_RBX1-related_39_127 species=[Clostridium] sticklandii genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_94_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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14954..16327
DNA (1374bp) protein (458aa)
Membrane protein related to metalloendopeptidase id=24608937 bin=RAAC11 species=Desulfitobacterium metallireducens genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
Membrane protein related to metalloendopeptidase Tax=GWF2_RBX1_38_17_curated
metalloendopeptidase
GWD2_RBX1_39_127_gwd2_scaffold_94_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(16305..17849)
DNA (1545bp) protein (515aa)
id=2121651 bin=GWE2_RBX1_39_32 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2121651 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_94_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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17982..18191
DNA (210bp) protein (70aa)
id=24608939 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24608939 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_94_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(18180..19523)
DNA (1344bp) protein (448aa)
TPR domain/SEC-C motif domain protein id=2121654 bin=GWE2_RBX1_39_32 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
TPR domain/SEC-C motif domain protein Tax=GWF2_RBX1_38_17_curated
TPR domain/SEC-C motif domain-containing protein
GWD2_RBX1_39_127_gwd2_scaffold_94_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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20214..21026
DNA (813bp) protein (271aa)
Peptidase id=2121656 bin=GWE2_RBX1_39_32 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Zn-dependent protease with chaperone function Tax=GWF2_RBX1_38_17_curated
Zn-dependent protease with chaperone function
GWD2_RBX1_39_127_gwd2_scaffold_94_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

21199..21507
DNA (309bp) protein (103aa)
id=2121658 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2121658 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_94_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(21522..22886)
DNA (1365bp) protein (455aa)
Two component, sigma54 specific, Fis family transcriptional regulator id=2121659 bin=GWE2_RBX1_39_32 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
two component, sigma54 specific, Fis family transcriptional regulator Tax=GWF2_RBX1_38_17_curated
two component, sigma54 specific, Fis family transcriptional regulator
GWD2_RBX1_39_127_gwd2_scaffold_94_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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23234..23524
DNA (291bp) protein (97aa)
nucleoid DNA-binding protein; K03530 DNA-binding protein HU-beta id=24608944 bin=RAAC11 species=Arenimonas oryziterrae genus=Arenimonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
nucleoid DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=GWF2_RBX1_38_17_curated
nucleoid DNA-binding protein
GWD2_RBX1_39_127_gwd2_scaffold_94_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

23738..25168
DNA (1431bp) protein (477aa)
hypothetical protein; K09749 hypothetical protein id=24608945 bin=RAAC11 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
hypothetical protein; K09749 hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_94_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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25273..27027
DNA (1755bp) protein (585aa)
serine/threonine protein kinase with PASTA sensor(s); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=GWF2_RBX1_38_17_curated
Non-specific serine/threonine protein kinase id=2148962 bin=GWD2_RBX1-related_39_127 species=Pseudoramibacter alactolyticus genus=Pseudoramibacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
serine/threonine protein kinase with PASTA sensor(s)
GWD2_RBX1_39_127_gwd2_scaffold_94_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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27030..27923
DNA (894bp) protein (298aa)
ribosome small subunit-dependent GTPase A; K06949 ribosome biogenesis GTPase [EC:3.6.1.-] Tax=GWF2_RBX1_38_17_curated
Putative ribosome biogenesis GTPase RsgA id=2148963 bin=GWD2_RBX1-related_39_127 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
ribosome biogenesis GTPase RsgA
GWD2_RBX1_39_127_gwd2_scaffold_94_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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27920..28567
DNA (648bp) protein (216aa)
ribulose-5-phosphate 3-epimerase; K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] id=24608948 bin=RAAC11 species=Syntrophobotulus glycolicus genus=Syntrophobotulus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
ribulose-5-phosphate 3-epimerase; K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=GWF2_RBX1_38_17_curated
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
GWD2_RBX1_39_127_gwd2_scaffold_94_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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28572..29693
DNA (1122bp) protein (374aa)
riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26); K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] T
riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD id=2148965 bin=GWD2_RBX1-related_39_127 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_94_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

30019..34563
DNA (4545bp) protein (1515aa)
id=2148966 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=2148966 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_94_25
R_Chlamydiae_49_9, Chlamydiia, Chlamydiae, Bacteria

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comp(34701..35639)
DNA (939bp) protein (313aa)
Putative uncharacterized protein id=2148967 bin=GWD2_RBX1-related_39_127 species=GWA2_TM6_36_9 genus=GWA2_TM6_36_9 taxon_order=GWA2_TM6_36_9 taxon_class=GWA2_TM6_36_9 phylum=TM6 tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Chlamydiae_49_9_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_94_trna_1
unknown

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35847..35919
DNA (73bp)
transferRNA
GWD2_RBX1_39_127_gwd2_scaffold_94_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

36231..36701
DNA (471bp) protein (157aa)
tRNA-adenosine deaminase (EC:3.5.4.-)
tRNA-adenosine deaminase Tax=GWF2_RBX1_38_17_curated
Cytidine/deoxycytidylate deaminase family protein id=2148968 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_94_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(36731..37594)
DNA (864bp) protein (288aa)
Putative uncharacterized protein id=2012655 bin=GWE2_RBX1_39_32 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein; K09116 hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_94_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(37707..38750)
DNA (1044bp) protein (348aa)
Glycosyl transferase group 1 id=2012656 bin=GWE2_RBX1_39_32 species=Thermoanaerobacter wiegelii genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
group 1 glycosyl transferase Tax=GWF2_RBX1_38_17_curated
group 1 glycosyl transferase
GWD2_RBX1_39_127_gwd2_scaffold_94_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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39220..40752
DNA (1533bp) protein (511aa)
Flagellin domain protein id=2148971 bin=GWD2_RBX1-related_39_127 species=SAR324 cluster bacterium JCVI-SC AAA005 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
flagellin domain-containing protein; K02406 flagellin Tax=GWF2_RBX1_38_17_curated
flagellin domain-containing protein
Displaying items 1-30 of 74 in total

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