ggKbase home page

GWD2_RBX1_39_127_gwd2_scaffold_91

Search features with annotation key words

Displaying items 1-30 of 96 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_91_trna_1
unknown

Not on your lists

comp(131..203)
DNA (73bp)
transferRNA
GWD2_RBX1_39_127_gwd2_scaffold_91_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

567..755
DNA (189bp) protein (63aa)
Uncharacterized protein id=2172640 bin=GWE2_RBX1_39_32 species=Methanoculleus bourgensis genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_91_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

1139..1411
DNA (273bp) protein (91aa)
id=2172639 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2172639 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_91_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

1573..1839
DNA (267bp) protein (89aa)
PQ loop repeat protein id=2143305 bin=GWD2_RBX1-related_39_127 species=Desulfosporosinus youngiae genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_91_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

2082..2255
DNA (174bp) protein (58aa)
id=2172636 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2172636 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_91_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

2798..3805
DNA (1008bp) protein (336aa)
Beta-lactamase id=2172634 bin=GWE2_RBX1_39_32 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
beta-lactamase Tax=GWF2_RBX1_38_17_curated
beta-lactamase
GWD2_RBX1_39_127_gwd2_scaffold_91_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

3955..4653
DNA (699bp) protein (233aa)
Polysaccharide deacetylase family sporulation protein PdaB id=2172632 bin=GWE2_RBX1_39_32 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
polysaccharide deacetylase family sporulation protein PdaB Tax=GWF2_RBX1_38_17_curated
polysaccharide deacetylase family sporulation protein PdaB
GWD2_RBX1_39_127_gwd2_scaffold_91_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

4799..5623
DNA (825bp) protein (275aa)
undecaprenol kinase; K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] Tax=GWF2_RBX1_38_17_curated
Undecaprenyl-diphosphatase id=2172630 bin=GWE2_RBX1_39_32 species=Leptotrichia goodfellowii genus=Leptotrichia taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
undecaprenol kinase
GWD2_RBX1_39_127_gwd2_scaffold_91_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(5682..6476)
DNA (795bp) protein (265aa)
id=2172629 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2172629 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_91_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(6732..7292)
DNA (561bp) protein (187aa)
id=2143319 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=24610015 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_91_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(7462..8682)
DNA (1221bp) protein (407aa)
Uncharacterized protein id=1867508 bin=GWE2_RBX1_39_32 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_91_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(8974..9393)
DNA (420bp) protein (140aa)
Putative uncharacterized protein id=1867509 bin=GWE2_RBX1_39_32 species=Helicobacter bilis genus=Helicobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
MORN repeat-containing protein Tax=GWF2_RBX1_38_17_curated
MORN repeat-containing protein
GWD2_RBX1_39_127_gwd2_scaffold_91_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

9770..10051
DNA (282bp) protein (94aa)
Hypothetical membrane protein id=1867510 bin=GWE2_RBX1_39_32 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_91_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(10093..10659)
DNA (567bp) protein (189aa)
Transcriptional regulator, TetR family id=2143326 bin=GWD2_RBX1-related_39_127 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
transcriptional regulator, TetR family Tax=GWF2_RBX1_38_17_curated
transcriptional regulator, TetR family
GWD2_RBX1_39_127_gwd2_scaffold_91_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

11053..11187
DNA (135bp) protein (45aa)
id=1867512 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1867512 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_91_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

11270..11698
DNA (429bp) protein (143aa)
Heat shock protein Hsp20 id=1867513 bin=GWE2_RBX1_39_32 species=unknown genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
heat shock protein Hsp20; K13993 HSP20 family protein Tax=GWF2_RBX1_38_17_curated
heat shock protein Hsp20
GWD2_RBX1_39_127_gwd2_scaffold_91_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(11862..13070)
DNA (1209bp) protein (403aa)
Putative uncharacterized protein id=1867514 bin=GWE2_RBX1_39_32 species=unknown genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein; K02004 putative ABC transport system permease protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_91_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(13067..13744)
DNA (678bp) protein (226aa)
ABC transporter related protein id=4425770 bin=GWF2_OP9-related_38_17 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein Tax=GWF2_RBX1_38_17_curated
ABC transporter-like protein
GWD2_RBX1_39_127_gwd2_scaffold_91_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(13746..14921)
DNA (1176bp) protein (392aa)
Putative HlyD family secretion protein id=2143333 bin=GWD2_RBX1-related_39_127 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
secretion protein HlyD; K02005 HlyD family secretion protein Tax=GWF2_RBX1_38_17_curated
secretion protein HlyD
GWD2_RBX1_39_127_gwd2_scaffold_91_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(14939..16339)
DNA (1401bp) protein (467aa)
Efflux pump, RND family, outer membrane protein id=1867522 bin=GWE2_RBX1_39_32 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
outer membrane efflux protein Tax=GWF2_RBX1_38_17_curated
RND transporter
GWD2_RBX1_39_127_gwd2_scaffold_91_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(16418..16699)
DNA (282bp) protein (94aa)
id=1867524 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1867524 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_91_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(16668..16910)
DNA (243bp) protein (81aa)
id=1867525 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1867525 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_91_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(16952..18643)
DNA (1692bp) protein (564aa)
glutaminyl-tRNA synthetase (EC:6.1.1.18); K01886 glutaminyl-tRNA synthetase [EC:6.1.1.18] id=24610028 bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RAAC11 organism_group=Unknown_CP
glutaminyl-tRNA synthetase (EC:6.1.1.18); K01886 glutaminyl-tRNA synthetase [EC:6.1.1.18] Tax=GWF2_RBX1_38_17_curated
glutaminyl-tRNA synthetase (EC:6.1.1.18)
GWD2_RBX1_39_127_gwd2_scaffold_91_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

18905..19435
DNA (531bp) protein (177aa)
id=2160327 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2160327 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_91_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

19542..21644
DNA (2103bp) protein (701aa)
multi-sensor signal transduction multi-kinase Tax=GWF2_RBX1_38_17_curated
Multi-sensor signal transduction multi-kinase id=2160325 bin=GWE2_RBX1_39_32 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
multi-sensor signal transduction multi-kinase
GWD2_RBX1_39_127_gwd2_scaffold_91_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

22034..22315
DNA (282bp) protein (94aa)
id=24610031 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24610031 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_91_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(22572..25055)
DNA (2484bp) protein (828aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=GWF2_RBX1_38_17_curated
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump id=2160322 bin=GWE2_RBX1_39_32 species=Syntrophomonas wolfei genus=Syntrophomonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_91_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(25167..25487)
DNA (321bp) protein (107aa)
4Fe-4S ferredoxin id=2143342 bin=GWD2_RBX1-related_39_127 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
NADH:ubiquinone oxidoreductase chain I-like protein Tax=GWF2_RBX1_38_17_curated
NADH:ubiquinone oxidoreductase chain I-like protein
GWD2_RBX1_39_127_gwd2_scaffold_91_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(25497..26576)
DNA (1080bp) protein (360aa)
NADH-ubiquinone oxidoreductase chain 49kDa id=2143370 bin=GWD2_RBX1-related_39_127 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Ni,Fe-hydrogenase III large subunit Tax=GWF2_RBX1_38_17_curated
Ni,Fe-hydrogenase III large subunit
GWD2_RBX1_39_127_gwd2_scaffold_91_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(26580..26978)
DNA (399bp) protein (133aa)
NADH dehydrogenase (Ubiquinone) 30 kDa subunit id=2160316 bin=GWE2_RBX1_39_32 species=Methanoplanus petrolearius genus=Methanoplanus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
NADH:ubiquinone oxidoreductase 27 kD subunit Tax=GWF2_RBX1_38_17_curated
NADH dehydrogenase (ubiquinone) 30 kDa subunit
Displaying items 1-30 of 96 in total

View Taxonomy