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GWD2_RBX1_39_127_gwd2_scaffold_136

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Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_136_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(90..1013)
DNA (924bp) protein (308aa)
Putative glutathione S-transferase-related transmembrane protein id=1782909 bin=GWD2_RBX1-related_39_127 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Activator of Hsp90 ATPase 1 family protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_136_2
Salinispira pacifica, Salinispira, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(1202..4264)
DNA (3063bp) protein (1021aa)
Type I restriction-modification system, restriction subunit R (EC:3.1.21.3)
Salinispira pacifica strain L21-RPul-D2, complete genome {ECO:0000313|EMBL:AHC16001.1}; EC=3.1.21.3 {ECO:0000313|EMBL:AHC16001.1};; TaxID=1307761 species="Bacteria; Spirochaetes; Spirochaetales; Spiro
Type I site-specific deoxyribonuclease, HsdR family id=1782911 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_136_3
Smithella sp. F21, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4265..5998)
DNA (1734bp) protein (578aa)
ATPase id=1782913 bin=GWD2_RBX1-related_39_127 species=Alcanivorax hongdengensis genus=Alcanivorax taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
ATPase {ECO:0000313|EMBL:KFN37944.1}; TaxID=1538640 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. F21.;"
ATPase
GWD2_RBX1_39_127_gwd2_scaffold_136_4
Providencia stuartii, Providencia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6000..7091)
DNA (1092bp) protein (364aa)
Putative uncharacterized protein id=1782915 bin=GWD2_RBX1-related_39_127 species=Vibrio vulnificus genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Uncharacterized protein {ECO:0000313|EMBL:KGY21555.1}; TaxID=588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Providencia.;" source="Providencia stuar
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_136_5
Photobacterium aphoticum, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7088..8281)
DNA (1194bp) protein (398aa)
Type I restriction-modification system specificity subunit S {ECO:0000313|EMBL:GAL06102.1}; EC=3.1.21.3 {ECO:0000313|EMBL:GAL06102.1};; TaxID=754436 species="Bacteria; Proteobacteria; Gammaproteobacte
Type I restriction-modification system, specificity subunit S (EC:3.1.21.3)
Type I restriction-modification system, endonuclease S subunit id=1782918 bin=GWD2_RBX1-related_39_127 species=Nitrobacter sp. Nb-311A genus=Nitrobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_136_6
Salinispira pacifica, Salinispira, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(8278..10371)
DNA (2094bp) protein (698aa)
Type I restriction-modification system, DNA-methyltransferase subunit M 1 (EC:2.1.1.72)
Salinispira pacifica strain L21-RPul-D2, complete genome {ECO:0000313|EMBL:AHC16003.1}; EC=2.1.1.72 {ECO:0000313|EMBL:AHC16003.1};; TaxID=1307761 species="Bacteria; Spirochaetes; Spirochaetales; Spiro
Type I restriction-modification system, DNA adenine N6-methyltransferase subunit id=1782921 bin=GWD2_RBX1-related_39_127 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_136_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10368..11816)
DNA (1449bp) protein (483aa)
Putative transcriptional regulator id=1782924 bin=GWD2_RBX1-related_39_127 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ABQ27094.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacte
GWD2_RBX1_39_127_gwd2_scaffold_136_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11850..12035)
DNA (186bp) protein (62aa)
Putative uncharacterized protein id=1782981 bin=GWD2_RBX1-related_39_127 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ27093.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniired
GWD2_RBX1_39_127_gwd2_scaffold_136_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(12032..13531)
DNA (1500bp) protein (500aa)
N-6 DNA methylase; K03427 type I restriction enzyme M protein [EC:2.1.1.72] Tax=GWF2_RBX1_38_17_curated
Type I restriction-modification system, DNA-methyltransferase subunit M 2 (EC:2.1.1.72)
N-6 DNA methylase id=1782983 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_136_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(13866..14981)
DNA (1116bp) protein (372aa)
id=1782985 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=4443013 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_136_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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15241..18225
DNA (2985bp) protein (995aa)
Uncharacterized protein id=1782986 bin=GWD2_RBX1-related_39_127 species=Myroides odoratimimus genus=Myroides taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein Tax=GWF2_RBX1_38_17_curated
Methyltransferase domain
GWD2_RBX1_39_127_gwd2_scaffold_136_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(18299..19678)
DNA (1380bp) protein (460aa)
Gp345 id=1782988 bin=GWD2_RBX1-related_39_127 species=Bacillus phage G genus=unknown taxon_order=Caudovirales taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Gp345 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_136_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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19849..20748
DNA (900bp) protein (300aa)
Putative uncharacterized protein id=1782989 bin=GWD2_RBX1-related_39_127 species=Legionella longbeachae genus=Legionella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_136_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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20732..21634
DNA (903bp) protein (301aa)
Putative L-threonine 3-dehydrogenase id=1782990 bin=GWD2_RBX1-related_39_127 species=Oscillatoria sp. PCC 6506 genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Alcohol dehydrogenase GroES domain protein Tax=GWF2_RBX1_38_17_curated
putative L-threonine 3-dehydrogenase
GWD2_RBX1_39_127_gwd2_scaffold_136_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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21634..23496
DNA (1863bp) protein (621aa)
Asparagine synthetase id=2189956 bin=GWE2_RBX1_39_32 species=Microcoleus sp. PCC 7113 genus=Microcoleus taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
asparagine synthase Tax=GWF2_RBX1_38_17_curated
asparagine synthase
GWD2_RBX1_39_127_gwd2_scaffold_136_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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23493..26249
DNA (2757bp) protein (919aa)
Linear gramicidin synthetase subunit D id=2189957 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
amino acid adenylation protein Tax=GWF2_RBX1_38_17_curated
amino acid adenylation protein
GWD2_RBX1_39_127_gwd2_scaffold_136_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

26251..27231
DNA (981bp) protein (327aa)
cytidyltransferase-related domain protein id=24609295 bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=RAAC11 organism_group=Unknown_CP
cytidyltransferase-related domain protein Tax=GWF2_RBX1_38_17_curated
cytidyltransferase-related domain protein
GWD2_RBX1_39_127_gwd2_scaffold_136_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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27405..28034
DNA (630bp) protein (210aa)
id=1782994 bin=GWD2_RBX1-related_39_127 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=2189959 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_136_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(28057..29292)
DNA (1236bp) protein (412aa)
Radical SAM domain protein id=2189960 bin=GWE2_RBX1_39_32 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
radical SAM protein Tax=GWF2_RBX1_38_17_curated
radical SAM protein
GWD2_RBX1_39_127_gwd2_scaffold_136_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(29295..31259)
DNA (1965bp) protein (655aa)
Cobalamin B12-binding domain protein id=2189961 bin=GWE2_RBX1_39_32 species=unknown genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
cobalamin B12-binding domain protein Tax=GWF2_RBX1_38_17_curated
conserved protein of unknown function
GWD2_RBX1_39_127_gwd2_scaffold_136_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(31273..32268)
DNA (996bp) protein (332aa)
Fe-S protein, radical SAM family id=1782997 bin=GWD2_RBX1-related_39_127 species=Azospirillum amazonense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Fe-S protein, radical SAM family Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_136_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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32509..33642
DNA (1134bp) protein (378aa)
hypothetical protein id=24609290 bin=RAAC11 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=RAAC11 organism_group=Unknown_CP
Radical SAM domain protein Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_136_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(33605..34603)
DNA (999bp) protein (333aa)
hypothetical protein id=24609289 bin=RAAC11 species=Legionella shakespearei genus=Legionella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_136_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(34625..36334)
DNA (1710bp) protein (570aa)
id=24609288 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24609288 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_136_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(36369..39689)
DNA (3321bp) protein (1107aa)
Midasin id=1945613 bin=GWE2_RBX1_39_32 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ATPase Tax=GWF2_RBX1_38_17_curated
ATPase
GWD2_RBX1_39_127_gwd2_scaffold_136_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(39702..42374)
DNA (2673bp) protein (891aa)
Hypothetical membrane protein id=1783002 bin=GWD2_RBX1-related_39_127 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical membrane protein Tax=GWF2_RBX1_38_17_curated
hypothetical membrane protein
GWD2_RBX1_39_127_gwd2_scaffold_136_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

42695..44587
DNA (1893bp) protein (631aa)
id=1783003 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=4442990 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_136_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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44627..45997
DNA (1371bp) protein (457aa)
Methyltransferase id=1783004 bin=GWD2_RBX1-related_39_127 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
methyltransferase Tax=GWF2_RBX1_38_17_curated
methyltransferase
GWD2_RBX1_39_127_gwd2_scaffold_136_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

45999..46649
DNA (651bp) protein (217aa)
Dephospho-CoA kinase id=1945556 bin=GWE2_RBX1_39_32 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Dephospho-CoA kinase Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_136_30
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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46646..48469
DNA (1824bp) protein (608aa)
Radical SAM domain protein id=1783008 bin=GWD2_RBX1-related_39_127 species=Aciduliprofundum boonei genus=Aciduliprofundum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
heme biosynthesis protein Tax=GWF2_RBX1_38_17_curated
Radical SAM domain heme biosynthesis protein
Displaying items 1-30 of 45 in total

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