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GWD2_RBX1_39_127_gwd2_scaffold_50

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Displaying items 1-30 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_50_trna_1
unknown

Not on your lists

comp(265..337)
DNA (73bp)
transferRNA
GWD2_RBX1_39_127_gwd2_scaffold_50_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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735..1754
DNA (1020bp) protein (340aa)
Molybdenum cofactor biosynthesis protein A id=1888058 bin=GWE2_RBX1_39_32 species=unknown genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
family 2 glycosyl transferase Tax=GWF2_RBX1_38_17_curated
Fe-S oxidoreductase
GWD2_RBX1_39_127_gwd2_scaffold_50_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

2158..2490
DNA (333bp) protein (111aa)
Rubredoxin-type Fe(Cys)4 protein id=4464187 bin=GWF2_OP9-related_38_17 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
rubredoxin-type Fe(Cys)4 protein Tax=GWF2_RBX1_38_17_curated
rubredoxin-type Fe(Cys)4 protein
GWD2_RBX1_39_127_gwd2_scaffold_50_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(3286..3681)
DNA (396bp) protein (132aa)
GAF sensor hybrid histidine kinase; K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] Tax=GWF2_RBX1_38_17_curated
GAF sensor hybrid histidine kinase id=1888060 bin=GWE2_RBX1_39_32 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GAF sensor hybrid histidine kinase
GWD2_RBX1_39_127_gwd2_scaffold_50_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(3819..4883)
DNA (1065bp) protein (355aa)
Magnesium and cobalt transport protein CorA id=2017721 bin=GWD2_RBX1-related_39_127 species=Methanosalsum zhilinae genus=Methanosalsum taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
magnesium and cobalt transport protein CorA; K03284 magnesium transporter Tax=GWF2_RBX1_38_17_curated
magnesium and cobalt transport protein CorA
GWD2_RBX1_39_127_gwd2_scaffold_50_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(4912..5949)
DNA (1038bp) protein (346aa)
MscS Mechanosensitive ion channel id=2017722 bin=GWD2_RBX1-related_39_127 species=Rivularia sp. PCC 7116 genus=Rivularia taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
small-conductance mechanosensitive channel Tax=GWF2_RBX1_38_17_curated
small-conductance mechanosensitive channel
GWD2_RBX1_39_127_gwd2_scaffold_50_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(6352..7350)
DNA (999bp) protein (333aa)
Phosphate transporter id=1888063 bin=GWE2_RBX1_39_32 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
phosphate transporter; K03306 inorganic phosphate transporter, PiT family Tax=GWF2_RBX1_38_17_curated
inorganic phosphate transporter
GWD2_RBX1_39_127_gwd2_scaffold_50_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(7355..7999)
DNA (645bp) protein (215aa)
Uncharacterized protein id=1888064 bin=GWE2_RBX1_39_32 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_50_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

8317..9006
DNA (690bp) protein (230aa)
Winged-helix phosphate transcriptional response regulator id=1888065 bin=GWE2_RBX1_39_32 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
DNA-binding response regulator; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB Tax=GWF2_RBX1_38_17_curated
phoB; winged-helix phosphate transcriptional response regulator
GWD2_RBX1_39_127_gwd2_scaffold_50_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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9003..10730
DNA (1728bp) protein (576aa)
Multi-sensor signal transduction histidine kinase id=2017726 bin=GWD2_RBX1-related_39_127 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
PAS domain S-box Tax=GWF2_RBX1_38_17_curated
PAS domain S-box
GWD2_RBX1_39_127_gwd2_scaffold_50_10
GWE2_Spirochaetes_31_10_curated, Spirochaetes, Bacteria

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10980..11852
DNA (873bp) protein (291aa)
Glycosyl transferase, group 1 id=2017727 bin=GWD2_RBX1-related_39_127 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
group 1 glycosyl transferase Tax=GWE2_Spirochaetes_31_10_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_50_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

12329..14125
DNA (1797bp) protein (599aa)
Sensor histidine kinase, HAMP domain-containing id=2017728 bin=GWD2_RBX1-related_39_127 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
HAMP domain-containing sensor histidine kinase Tax=GWF2_RBX1_38_17_curated
sensor histidine kinase, HAMP domain-containing
GWD2_RBX1_39_127_gwd2_scaffold_50_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

14325..15416
DNA (1092bp) protein (364aa)
GTPase EngC; K06949 ribosome biogenesis GTPase [EC:3.6.1.-] Tax=GWF2_RBX1_38_17_curated
rsgA2; putative ribosome biogenesis GTPase RsgA 2 (EC:3.6.1.-)
Putative ribosome biogenesis GTPase RsgA id=2017729 bin=GWD2_RBX1-related_39_127 species=Desulfotomaculum reducens genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_50_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(15638..16672)
DNA (1035bp) protein (345aa)
Phosphate ABC transporter, periplasmic phosphate-binding protein id=2161337 bin=GWE2_RBX1_39_32 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
phosphate ABC transporter substrate-binding protein; K02040 phosphate transport system substrate-binding protein Tax=GWF2_RBX1_38_17_curated
phosphate ABC transporter substrate-binding protein
GWD2_RBX1_39_127_gwd2_scaffold_50_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(16712..17698)
DNA (987bp) protein (329aa)
id=2017731 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=24610180 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_50_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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18043..20838
DNA (2796bp) protein (932aa)
NA id=2017732 bin=GWD2_RBX1-related_39_127 species=Lawsonia intracellularis genus=Lawsonia taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_50_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(20833..21273)
DNA (441bp) protein (147aa)
id=2161342 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2161342 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_50_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

21530..23080
DNA (1551bp) protein (517aa)
id=2161343 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2161343 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_50_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(23520..24386)
DNA (867bp) protein (289aa)
id=2161344 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2161344 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_50_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

24741..25778
DNA (1038bp) protein (346aa)
phosphate ABC transporter substrate-binding protein; K02040 phosphate transport system substrate-binding protein id=24610185 bin=RAAC11 species=Thermodesulfatator atlanticus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=RAAC11 organism_group=Unknown_CP
phosphate ABC transporter substrate-binding protein; K02040 phosphate transport system substrate-binding protein Tax=GWF2_RBX1_38_17_curated
phosphate ABC transporter substrate-binding protein
GWD2_RBX1_39_127_gwd2_scaffold_50_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

25861..26799
DNA (939bp) protein (313aa)
Phosphate ABC transporter, inner membrane subunit PstC id=2161348 bin=GWE2_RBX1_39_32 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
phosphate ABC transporter permease; K02037 phosphate transport system permease protein Tax=GWF2_RBX1_38_17_curated
phosphate ABC transporter permease
GWD2_RBX1_39_127_gwd2_scaffold_50_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

26801..27649
DNA (849bp) protein (283aa)
Phosphate ABC transporter, inner membrane subunit PstA id=3179328 bin=GWF2_OP9-related_38_17 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
phosphate ABC transporter permease; K02038 phosphate transport system permease protein Tax=GWF2_RBX1_38_17_curated
phosphate ABC transporter permease
GWD2_RBX1_39_127_gwd2_scaffold_50_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

27631..28389
DNA (759bp) protein (253aa)
phosphate ABC transporter ATPase; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] Tax=GWF2_RBX1_38_17_curated
Phosphate ABC transporter, ATPase subunit id=2161352 bin=GWE2_RBX1_39_32 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
phosphate ABC transporter ATPase
GWD2_RBX1_39_127_gwd2_scaffold_50_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

28453..29109
DNA (657bp) protein (219aa)
Phosphate transport system protein PhoU id=2017801 bin=GWD2_RBX1-related_39_127 species=Caldisericum exile genus=Caldisericum taxon_order=Caldisericales taxon_class=Caldisericia phylum=Caldiserica tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
phoU; phosphate transport system protein PhoU; K02039 phosphate transport system protein Tax=GWF2_RBX1_38_17_curated
phoU; phosphate transport system protein PhoU
GWD2_RBX1_39_127_gwd2_scaffold_50_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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29524..30600
DNA (1077bp) protein (359aa)
Putative ATP synthase F0, A subunit id=2161354 bin=GWE2_RBX1_39_32 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_50_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

30642..30896
DNA (255bp) protein (85aa)
Smr protein/MutS2 id=24610191 bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=RAAC11 organism_group=Unknown_CP
Smr protein/MutS2 Tax=GWF2_RBX1_38_17_curated
DNA mismatch repair protein MutS
GWD2_RBX1_39_127_gwd2_scaffold_50_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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31203..32036
DNA (834bp) protein (278aa)
Hypothetical membrane protein id=2017806 bin=GWD2_RBX1-related_39_127 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_50_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

32131..32925
DNA (795bp) protein (265aa)
Putative uncharacterized protein id=2017808 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=3179349 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_50_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(33181..33477)
DNA (297bp) protein (99aa)
hypothetical protein id=24610194 bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RAAC11 organism_group=Unknown_CP
hypothetical protein Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_50_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(33544..34179)
DNA (636bp) protein (212aa)
id=2161362 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2161362 Tax=GWF2_RBX1_38_17_curated
Displaying items 1-30 of 102 in total

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