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GWD2_RBX1_39_127_gwd2_scaffold_342

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Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_342_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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188..610
DNA (423bp) protein (141aa)
Transposase id=1940641 bin=GWD2_RBX1-related_39_127 species=Synechocystis sp. PCC 6803 genus=Synechocystis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Integrase catalytic region Tax=GWF2_RBX1_38_17_curated
slr1523; transposase
GWD2_RBX1_39_127_gwd2_scaffold_342_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(824..2956)
DNA (2133bp) protein (711aa)
Methyl-accepting chemotaxis sensory transducer id=1859474 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
methyl-accepting chemotaxis protein Tax=GWF2_RBX1_38_17_curated
methyl-accepting chemotaxis sensory transducer
GWD2_RBX1_39_127_gwd2_scaffold_342_3
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3449..3973)
DNA (525bp) protein (175aa)
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein id=24610572 bin=RAAC11 species=Bacteriovorax sp. BSW11_IV genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
putative chemotaxis methyl-accepting receptor
GWD2_RBX1_39_127_gwd2_scaffold_342_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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4381..4908
DNA (528bp) protein (176aa)
RNA polymerase sigma factor id=1859470 bin=GWE2_RBX1_39_32 species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ECF subfamily RNA polymerase sigma-24 subunit Tax=GWF2_RBX1_38_17_curated
RNA polymerase, sigma-24 subunit, ECF subfamily
GWD2_RBX1_39_127_gwd2_scaffold_342_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

4895..5233
DNA (339bp) protein (113aa)
id=1940686 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=1859469 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_342_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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5307..5816
DNA (510bp) protein (170aa)
Hypothetical exported protein id=1859466 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Hypothetical exported protein Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_342_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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5938..6675
DNA (738bp) protein (246aa)
Outer membrane lipoprotein-sorting protein id=1859464 bin=GWE2_RBX1_39_32 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
membrane protein
GWD2_RBX1_39_127_gwd2_scaffold_342_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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6742..7959
DNA (1218bp) protein (406aa)
Putative permease id=1940692 bin=GWD2_RBX1-related_39_127 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
permease Tax=GWF2_RBX1_38_17_curated
permease
GWD2_RBX1_39_127_gwd2_scaffold_342_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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8045..9280
DNA (1236bp) protein (412aa)
ABC-type transport system, permease component id=1859458 bin=GWE2_RBX1_39_32 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ABC-type transport system, permease component Tax=GWF2_RBX1_38_17_curated
ABC-type transport system, permease component
GWD2_RBX1_39_127_gwd2_scaffold_342_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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9323..10027
DNA (705bp) protein (235aa)
Uncharacterized ABC transporter, ATP-binding protein id=1859457 bin=GWE2_RBX1_39_32 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ABC transporter ATP-binding protein Tax=GWF2_RBX1_38_17_curated
ABC transporter ATP-binding protein
GWD2_RBX1_39_127_gwd2_scaffold_342_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

10024..11166
DNA (1143bp) protein (381aa)
Uncharacterized protein id=1859456 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Uncharacterized protein Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_342_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(11322..12278)
DNA (957bp) protein (319aa)
Exopolysaccharide biosynthesis protein id=1940700 bin=GWD2_RBX1-related_39_127 species=Desulfosporosinus acidiphilus genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
exopolysaccharide biosynthesis protein Tax=GWF2_RBX1_38_17_curated
exopolysaccharide biosynthesis protein
GWD2_RBX1_39_127_gwd2_scaffold_342_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

12774..13643
DNA (870bp) protein (290aa)
Radical SAM domain protein id=1940701 bin=GWD2_RBX1-related_39_127 species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
radical SAM protein Tax=GWF2_RBX1_38_17_curated
radical SAM protein
GWD2_RBX1_39_127_gwd2_scaffold_342_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

14034..16352
DNA (2319bp) protein (773aa)
id=1940702 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=1859453 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_342_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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16441..17298
DNA (858bp) protein (286aa)
Formamidopyrimidine-DNA glycosylase (EC:3.2.2.23); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Tax=GWF2_RBX1_38_17_curated
Formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase id=1940703 bin=GWD2_RBX1-related_39_127 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_342_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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17324..18049
DNA (726bp) protein (242aa)
Putative dolichyl-phosphate mannose synthase id=1859451 bin=GWE2_RBX1_39_32 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
family 2 glycosyl transferase Tax=GWF2_RBX1_38_17_curated
family 2 glycosyl transferase
GWD2_RBX1_39_127_gwd2_scaffold_342_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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18040..18732
DNA (693bp) protein (231aa)
LmbE family protein id=1859449 bin=GWE2_RBX1_39_32 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
LmbE family protein Tax=GWF2_RBX1_38_17_curated
LmbE family protein
GWD2_RBX1_39_127_gwd2_scaffold_342_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

18725..20266
DNA (1542bp) protein (514aa)
hypothetical protein Tax=GWF2_RBX1_38_17_curated
Uncharacterized protein id=1859447 bin=GWE2_RBX1_39_32 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_342_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(20253..22277)
DNA (2025bp) protein (675aa)
nadE; putative glutamine-dependent NAD(+) synthetase (EC:6.3.5.1); K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] id=24610556 bin=RAAC11 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
nadE; putative glutamine-dependent NAD(+) synthetase (EC:6.3.5.1); K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] Tax=GWF2_RBX1_38_17_curated
nadE; putative glutamine-dependent NAD(+) synthetase (EC:6.3.5.1)
GWD2_RBX1_39_127_gwd2_scaffold_342_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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22434..23699
DNA (1266bp) protein (422aa)
id=1859444 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1859444 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_342_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(23809..24492)
DNA (684bp) protein (228aa)
DedA family protein id=3998985 bin=GWF2_OP9-related_38_17 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
dedA family protein; K03975 membrane-associated protein Tax=GWF2_RBX1_38_17_curated
dedA family protein
GWD2_RBX1_39_127_gwd2_scaffold_342_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(24934..26994)
DNA (2061bp) protein (687aa)
TonB-dependent receptor id=1940710 bin=GWD2_RBX1-related_39_127 species=unknown genus=Cycloclasticus taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Outer membrane receptor protein, mostly Fe transport Tax=GWF2_RBX1_38_17_curated
Outer membrane receptor protein, mostly Fe transport
GWD2_RBX1_39_127_gwd2_scaffold_342_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(27379..28503)
DNA (1125bp) protein (375aa)
Uncharacterized protein id=1940711 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Uncharacterized protein Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_342_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(28602..28826)
DNA (225bp) protein (75aa)
id=24610676 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=1859363 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_342_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(29216..29914)
DNA (699bp) protein (233aa)
id=24610677 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=3998981 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_342_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(29899..30429)
DNA (531bp) protein (177aa)
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=24610678 bin=RAAC11 species=Natranaerobius thermophilus genus=Natranaerobius taxon_order=Natranaerobiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWF2_RBX1_38_17_curated
ECF subfamily RNA polymerase sigma-24 subunit
GWD2_RBX1_39_127_gwd2_scaffold_342_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

30727..32298
DNA (1572bp) protein (524aa)
id=1859360 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1859360 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_342_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(32318..33121)
DNA (804bp) protein (268aa)
Radical SAM domain protein id=1940716 bin=GWD2_RBX1-related_39_127 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
radical SAM protein; K03639 molybdenum cofactor biosynthesis protein Tax=GWF2_RBX1_38_17_curated
molybdenum cofactor biosynthesis protein MoeA
GWD2_RBX1_39_127_gwd2_scaffold_342_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(33123..33722)
DNA (600bp) protein (200aa)
molybdopterin-guanine dinucleotide biosynthesis protein A-like protein; K03752 molybdopterin-guanine dinucleotide biosynthesis protein A [EC:2.7.7.77] id=24610681 bin=RAAC11 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
molybdopterin-guanine dinucleotide biosynthesis protein A-like protein; K03752 molybdopterin-guanine dinucleotide biosynthesis protein A [EC:2.7.7.77] Tax=GWF2_RBX1_38_17_curated
molybdopterin-guanine dinucleotide biosynthesis protein A-like protein
GWD2_RBX1_39_127_gwd2_scaffold_342_30
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(33712..33891)
DNA (180bp) protein (60aa)
id=1859357 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1859357 Tax=GWF2_RBX1_38_17_curated
Displaying items 1-30 of 34 in total

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