ggKbase home page

GWD2_RBX1_39_127_gwd2_scaffold_344

Search features with annotation key words

Displaying items 1-30 of 34 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_344_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(145..516)
DNA (372bp) protein (124aa)
id=2150217 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2150217 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_344_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(873..3560)
DNA (2688bp) protein (896aa)
Pectate lyase id=1941553 bin=GWD2_RBX1-related_39_127 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
pectate lyase Tax=GWF2_RBX1_38_17_curated
pectate lyase
GWD2_RBX1_39_127_gwd2_scaffold_344_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(4192..5331)
DNA (1140bp) protein (380aa)
glycosyl transferase family protein (EC:2.4.-.-) Tax=GWF2_RBX1_38_17_curated
Putative uncharacterized protein id=2150220 bin=GWE2_RBX1_39_32 species=Lachnospiraceae bacterium 3_1_57FAA_CT1 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
glycosyl transferase family 1
GWD2_RBX1_39_127_gwd2_scaffold_344_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(5328..6386)
DNA (1059bp) protein (353aa)
Putative uncharacterized protein id=1941555 bin=GWD2_RBX1-related_39_127 species=Lachnospiraceae bacterium 3_1_57FAA_CT1 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Fe-S oxidoreductase Tax=GWF2_RBX1_38_17_curated
Fe-S oxidoreductase
GWD2_RBX1_39_127_gwd2_scaffold_344_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(7218..8417)
DNA (1200bp) protein (400aa)
Glycosyl transferase group 1 id=1941556 bin=GWD2_RBX1-related_39_127 species=Dictyoglomus turgidum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
group 1 glycosyl transferase Tax=GWF2_RBX1_38_17_curated
group 1 glycosyl transferase
GWD2_RBX1_39_127_gwd2_scaffold_344_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(8433..9770)
DNA (1338bp) protein (446aa)
Uncharacterized protein id=1941557 bin=GWD2_RBX1-related_39_127 species=Bacteroides nordii genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
glycosyl transferase 4 Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_344_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(9767..11236)
DNA (1470bp) protein (490aa)
id=24609741 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24609741 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_344_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(11262..12383)
DNA (1122bp) protein (374aa)
Glycosyltransferase id=2150227 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RfaG5; glycosyltransferase Tax=GWF2_RBX1_38_17_curated
RfaG5; glycosyltransferase
GWD2_RBX1_39_127_gwd2_scaffold_344_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(12447..13622)
DNA (1176bp) protein (392aa)
glycosyl transferase, group 1 id=24609743 bin=RAAC11 species=Bacillus cereus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
glycosyl transferase, group 1 Tax=GWF2_RBX1_38_17_curated
glycosyl transferase, group 1
GWD2_RBX1_39_127_gwd2_scaffold_344_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(13638..15038)
DNA (1401bp) protein (467aa)
Capsular polysaccharide biosynthesis protein id=1941561 bin=GWD2_RBX1-related_39_127 species=Methanobacterium sp. genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
capK; capsular polysaccharide biosynthesis protein Tax=GWF2_RBX1_38_17_curated
capsular polysaccharide biosynthesis protein
GWD2_RBX1_39_127_gwd2_scaffold_344_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(15111..16520)
DNA (1410bp) protein (470aa)
capsular polysaccharide biosynthesis protein; K01912 phenylacetate-CoA ligase [EC:6.2.1.30] Tax=GWF2_RBX1_38_17_curated
Capsular polysaccharide biosynthesis protein id=1941562 bin=GWD2_RBX1-related_39_127 species=Methanobacterium sp. genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
capsular polysaccharide biosynthesis protein
GWD2_RBX1_39_127_gwd2_scaffold_344_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(16576..17946)
DNA (1371bp) protein (457aa)
coenzyme-F390 synthetase (EC:6.2.1.30) Tax=GWF2_RBX1_38_17_curated
coenzyme-F390 synthetase (EC:6.2.1.30)
Capsular polysaccharide biosynthesis protein id=1941563 bin=GWD2_RBX1-related_39_127 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_344_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(17990..19471)
DNA (1482bp) protein (494aa)
cpsL; putative polysaccharide biosynthesis protein CpsL
Polysaccharide biosynthesis protein id=2150232 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Polysaccharide biosynthesis protein Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_344_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(19485..20387)
DNA (903bp) protein (301aa)
Uncharacterized protein id=2150233 bin=GWE2_RBX1_39_32 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Uncharacterized protein Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_344_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(20462..21484)
DNA (1023bp) protein (341aa)
Putative uncharacterized protein id=2150257 bin=GWE2_RBX1_39_32 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
putative poly-gamma-glutamate biosynthesis (capsule formation)-like protein Tax=GWF2_RBX1_38_17_curated
putative poly-gamma-glutamate biosynthesis (capsule formation)-like protein
GWD2_RBX1_39_127_gwd2_scaffold_344_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

22136..23581
DNA (1446bp) protein (482aa)
undecaprenyl-phosphate galactose phosphotransferase (EC:2.7.8.6) Tax=GWF2_RBX1_38_17_curated
Putative undecaprenyl-phosphate galactose phosphotransferase id=2150259 bin=GWE2_RBX1_39_32 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
undecaprenyl-phosphate galactose phosphotransferase
GWD2_RBX1_39_127_gwd2_scaffold_344_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

23738..24697
DNA (960bp) protein (320aa)
Polysaccharide export protein id=2150262 bin=GWE2_RBX1_39_32 species=Thauera phenylacetica genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
polysaccharide export protein; K01991 polysaccharide export outer membrane protein Tax=GWF2_RBX1_38_17_curated
polysaccharide export protein
GWD2_RBX1_39_127_gwd2_scaffold_344_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

24709..25425
DNA (717bp) protein (239aa)
ptpZ; phosphotyrosine protein phosphatase (EC:3.1.3.48) Tax=GWF2_RBX1_38_17_curated
ptpZ; phosphotyrosine protein phosphatase (EC:3.1.3.48)
Phosphotyrosine-protein phosphatase (Capsularpolysaccharide biosynthesis) id=1941569 bin=GWD2_RBX1-related_39_127 species=Geobacillus sp. GHH01 genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_344_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

25500..27374
DNA (1875bp) protein (625aa)
non-specific protein-tyrosine kinase (EC:2.7.10.2); K08253 non-specific protein-tyrosine kinase [EC:2.7.10.2] Tax=GWF2_RBX1_38_17_curated
non-specific protein-tyrosine kinase (EC:2.7.10.2)
Capsular exopolysaccharide family id=2150264 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_344_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(27778..29349)
DNA (1572bp) protein (524aa)
putative histidine kinase (EC:2.7.13.3) Tax=GWF2_RBX1_38_17_curated
Putative Histidine kinase, contains GAF domain id=1941571 bin=GWD2_RBX1-related_39_127 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_344_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(29355..30407)
DNA (1053bp) protein (351aa)
Methyltransferase domain protein id=1941572 bin=GWD2_RBX1-related_39_127 species=Bdellovibrio exovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_344_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(30979..32181)
DNA (1203bp) protein (401aa)
Response regulator containing CheY-like receiver id=1941573 bin=GWD2_RBX1-related_39_127 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
LuxR family two component transcriptional regulator Tax=GWF2_RBX1_38_17_curated
ntrX; response regulator containing CheY-like receiver
GWD2_RBX1_39_127_gwd2_scaffold_344_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(32181..32675)
DNA (495bp) protein (165aa)
id=24609758 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=1771164 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_344_24
unknown

Not on your lists

32762..32938
DNA (177bp) protein (59aa)
id=1941575 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=1941575 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_344_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

32935..33309
DNA (375bp) protein (125aa)
Response regulator id=1822671 bin=GWE2_RBX1_39_32 species=Desulfovibrio sp. A2 genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
spo0F; stage 0 sporulation protein F; K02490 two-component system, response regulator, stage 0 sporulation protein F Tax=GWF2_RBX1_38_17_curated
Fis family two component sigma54 specific transcriptional regulator
GWD2_RBX1_39_127_gwd2_scaffold_344_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

33306..33467
DNA (162bp) protein (54aa)
id=1941638 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=1979094 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_344_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

33717..34508
DNA (792bp) protein (264aa)
id=1941640 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=1859453 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_344_28
Snodgrassella alvi, Snodgrassella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34471..37905
DNA (3435bp) protein (1145aa)
hemolysin-type calcium-binding region id=24609763 bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RAAC11 organism_group=Unknown_CP
Iron-regulated protein FrpC {ECO:0000313|EMBL:KDN12680.1}; TaxID=1196083 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Snodgrassella.;" source="Snodgrassella alvi
exported protein of unknown function
GWD2_RBX1_39_127_gwd2_scaffold_344_29
Lyngbya aestuarii, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

37970..39127
DNA (1158bp) protein (386aa)
Leucine-rich repeat-containing protein id=1941647 bin=GWD2_RBX1-related_39_127 species=Microcoleus vaginatus genus=Microcoleus taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Leucine Rich repeat family protein {ECO:0000313|EMBL:ERT06516.1}; TaxID=1348334 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya aestuarii BL J.;"
leucine-rich repeat-containing protein
GWD2_RBX1_39_127_gwd2_scaffold_344_30
unknown

Not on your lists

comp(39210..39374)
DNA (165bp) protein (55aa)
id=24609765 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24609765 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
Displaying items 1-30 of 34 in total

View Taxonomy