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GWD2_RBX1_39_127_gwd2_scaffold_345

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_345_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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2..1435
DNA (1434bp) protein (478aa)
MoxR-like ATPase id=24608302 bin=RAAC11 species=Sanguibacter keddieii genus=Sanguibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RAAC11 organism_group=Unknown_CP
Sulphatase-modifying factor protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_345_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

1467..3437
DNA (1971bp) protein (657aa)
Putative uncharacterized protein id=1942018 bin=GWD2_RBX1-related_39_127 species=Leptospira biflexa genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_345_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

3772..4599
DNA (828bp) protein (276aa)
id=1864872 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1864872 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_345_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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4645..8415
DNA (3771bp) protein (1257aa)
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (EC:6.3.5.1); K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] Tax=GWF2_RBX1_38_17_curated
NAD+ synthetase (EC:6.3.5.1)
NAD+ synthetase id=1864874 bin=GWE2_RBX1_39_32 species=Saccharophagus degradans genus=Saccharophagus taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_345_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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8564..8776
DNA (213bp) protein (71aa)
Putative uncharacterized protein id=1864893 bin=GWE2_RBX1_39_32 species=Methanosarcina barkeri genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein; K07069 Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_345_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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8964..9542
DNA (579bp) protein (193aa)
hypothetical protein AcelC_03931 id=1864896 bin=GWE2_RBX1_39_32 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
putative membrane protein
GWD2_RBX1_39_127_gwd2_scaffold_345_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(9773..10141)
DNA (369bp) protein (123aa)
Uncharacterized protein id=1864899 bin=GWE2_RBX1_39_32 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_345_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(10648..15405)
DNA (4758bp) protein (1586aa)
methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=GWF2_RBX1_38_17_curated
Putative uncharacterized protein id=1942029 bin=GWD2_RBX1-related_39_127 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
methionyl-tRNA formyltransferase
GWD2_RBX1_39_127_gwd2_scaffold_345_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(15410..16558)
DNA (1149bp) protein (383aa)
DegT/DnrJ/EryC1/StrS aminotransferase id=1942031 bin=GWD2_RBX1-related_39_127 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
putative PLP-dependent enzyme possibly involved in cell wall biogenesis Tax=GWF2_RBX1_38_17_curated
putative PLP-dependent enzyme possibly involved in cell wall biogenesis
GWD2_RBX1_39_127_gwd2_scaffold_345_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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16793..17497
DNA (705bp) protein (235aa)
FKBP-type peptidyl-prolyl cis-trans isomerase; K03773 FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] Tax=GWF2_RBX1_38_17_curated
Peptidyl-prolyl cis-trans isomerase id=1942033 bin=GWD2_RBX1-related_39_127 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
FKBP-type peptidylprolyl cis-trans isomerase
GWD2_RBX1_39_127_gwd2_scaffold_345_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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17589..17831
DNA (243bp) protein (81aa)
Uncharacterized conserved protein id=2192071 bin=GWE2_RBX1_39_32 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_345_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

18032..20572
DNA (2541bp) protein (847aa)
PAS/PAC sensor signal transduction histidine kinase id=2192069 bin=GWE2_RBX1_39_32 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
multi-sensor signal transduction histidine kinase Tax=GWF2_RBX1_38_17_curated
multi-sensor signal transduction histidine kinase
GWD2_RBX1_39_127_gwd2_scaffold_345_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

20682..21659
DNA (978bp) protein (326aa)
id=2192067 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2192067 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_345_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(21742..22158)
DNA (417bp) protein (139aa)
id=2192066 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2192066 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_345_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(22445..24019)
DNA (1575bp) protein (525aa)
Methyl-accepting chemotaxis sensory transducer id=2192064 bin=GWE2_RBX1_39_32 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
methyl-accepting chemotaxis sensory transducer Tax=GWF2_RBX1_38_17_curated
methyl-accepting chemotaxis sensory transducer
GWD2_RBX1_39_127_gwd2_scaffold_345_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(24186..26528)
DNA (2343bp) protein (781aa)
Methyl-accepting chemotaxis sensory transducer with Cache sensor id=1942043 bin=GWD2_RBX1-related_39_127 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
methyl-accepting chemotaxis sensory transducer with Cache sensor; K03406 methyl-accepting chemotaxis protein Tax=GWF2_RBX1_38_17_curated
methyl-accepting chemotaxis sensory transducer with Cache sensor
GWD2_RBX1_39_127_gwd2_scaffold_345_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(26625..26807)
DNA (183bp) protein (61aa)
id=24610925 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24610925 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_345_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

27223..27369
DNA (147bp) protein (49aa)
id=2192060 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2192060 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_345_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

27859..28014
DNA (156bp) protein (52aa)
id=2192051 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2192051 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_345_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

28018..31350
DNA (3333bp) protein (1111aa)
PAS/PAC sensor signal transduction histidine kinase Tax=GWF2_RBX1_38_17_curated
PAS/PAC sensor signal transduction histidine kinase id=2192050 bin=GWE2_RBX1_39_32 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
PAS/PAC sensor signal transduction histidine kinase
GWD2_RBX1_39_127_gwd2_scaffold_345_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

31347..32990
DNA (1644bp) protein (548aa)
Two-component sensor kinase id=2192049 bin=GWE2_RBX1_39_32 species=Geitlerinema sp. PCC 7407 genus=Geitlerinema taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
integral membrane sensor hybrid histidine kinase Tax=GWF2_RBX1_38_17_curated
integral membrane sensor hybrid histidine kinase
GWD2_RBX1_39_127_gwd2_scaffold_345_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(33150..33317)
DNA (168bp) protein (56aa)
id=2192048 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2192048 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_345_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

33553..33966
DNA (414bp) protein (138aa)
id=2192047 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2192047 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_345_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

34160..34546
DNA (387bp) protein (129aa)
id=24610932 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24610932 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_345_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

34613..35023
DNA (411bp) protein (137aa)
id=24610933 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=4005696 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_345_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(35191..36597)
DNA (1407bp) protein (469aa)
id=24610934 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24610934 Tax=GWF2_RBX1_38_17_curated
Displaying 26 items

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