ggKbase home page

GWD2_RBX1_39_127_gwd2_scaffold_1608

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_1608_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(3..1106)
DNA (1104bp) protein (368aa)
Cysteine desulfurase id=1810595 bin=GWD2_RBX1-related_39_127 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
cysteine desulfurase family protein Tax=GWF2_RBX1_38_17_curated
cysteine desulfurase family protein
GWD2_RBX1_39_127_gwd2_scaffold_1608_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(1128..1460)
DNA (333bp) protein (111aa)
Putative uncharacterized protein id=2172644 bin=GWE2_RBX1_39_32 species=Desulfitobacterium metallireducens genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_1608_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(1479..2129)
DNA (651bp) protein (217aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein id=2172646 bin=GWE2_RBX1_39_32 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
4Fe-4S ferredoxin Tax=GWF2_RBX1_38_17_curated
4Fe-4S ferredoxin
GWD2_RBX1_39_127_gwd2_scaffold_1608_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(2147..2476)
DNA (330bp) protein (110aa)
Regulatory protein ArsR id=1810639 bin=GWD2_RBX1-related_39_127 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator Tax=GWF2_RBX1_38_17_curated
ArsR family transcriptional regulator
GWD2_RBX1_39_127_gwd2_scaffold_1608_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

2612..3046
DNA (435bp) protein (145aa)
Transcriptional regulatory protein id=2172650 bin=GWE2_RBX1_39_32 species=Clostridium tetani genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
transcriptional regulatory protein; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=GWF2_RBX1_38_17_curated
transcriptional regulatory protein
GWD2_RBX1_39_127_gwd2_scaffold_1608_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(3064..3294)
DNA (231bp) protein (77aa)
Helix-turn-helix domain-containing protein id=2172652 bin=GWE2_RBX1_39_32 species=Zunongwangia profunda genus=Zunongwangia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Helix-turn-helix domain-containing protein Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_1608_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

3410..3766
DNA (357bp) protein (119aa)
Response regulator/phosphatase id=2172654 bin=GWE2_RBX1_39_32 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
response regulator receiver protein; K03413 two-component system, chemotaxis family, response regulator CheY Tax=GWF2_RBX1_38_17_curated
response regulator receiver protein
GWD2_RBX1_39_127_gwd2_scaffold_1608_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(3901..5349)
DNA (1449bp) protein (483aa)
Na+/H+ antiporter id=1810643 bin=GWD2_RBX1-related_39_127 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
potassium/proton antiporter; K11105 cell volume regulation protein A Tax=GWF2_RBX1_38_17_curated
potassium/proton antiporter
GWD2_RBX1_39_127_gwd2_scaffold_1608_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(5410..5871)
DNA (462bp) protein (154aa)
Uncharacterized protein id=2172658 bin=GWE2_RBX1_39_32 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_1608_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(5951..6229)
DNA (279bp) protein (93aa)
id=2172660 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2172660 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_1608_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(6396..6650)
DNA (255bp) protein (85aa)
id=2172661 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2172661 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_1608_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(6647..8065)
DNA (1419bp) protein (473aa)
F0F1 ATP synthase subunit beta (EC:3.6.3.14); K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] Tax=GWF2_RBX1_38_17_curated
ATP synthase subunit beta id=1810647 bin=GWD2_RBX1-related_39_127 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
ATP synthase subunit beta
GWD2_RBX1_39_127_gwd2_scaffold_1608_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(8071..8964)
DNA (894bp) protein (298aa)
atpG; ATP synthase F1, gamma subunit (EC:3.6.3.14) Tax=GWF2_RBX1_38_17_curated
atpG; ATP synthase F1, gamma subunit (EC:3.6.3.14)
ATP synthase gamma chain, sodium ion specific id=2172689 bin=GWE2_RBX1_39_32 species=Propionigenium modestum genus=Propionigenium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_1608_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(8964..10523)
DNA (1560bp) protein (520aa)
atpA; ATP synthase F1 complex subunit alpha (EC:3.6.3.14) Tax=GWF2_RBX1_38_17_curated
atpA; ATP synthase F1 complex subunit alpha (EC:3.6.3.14)
ATP synthase F1 complex subunit alpha id=2172691 bin=GWE2_RBX1_39_32 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_1608_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(10539..11078)
DNA (540bp) protein (180aa)
ATP synthase F1 subunit delta (EC:3.6.3.14); K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14] Tax=GWF2_RBX1_38_17_curated
ATP synthase subunit 5 id=2172693 bin=GWE2_RBX1_39_32 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
atpH; ATP synthase subunit delta, sodium ion specific
GWD2_RBX1_39_127_gwd2_scaffold_1608_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(11062..11562)
DNA (501bp) protein (167aa)
atpF; ATP synthase F0 subunit B (EC:3.6.3.14); K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14] Tax=GWF2_RBX1_38_17_curated
atpF; ATP synthase F0 subunit B (EC:3.6.3.14)
ATP synthase subunit b id=1810651 bin=GWD2_RBX1-related_39_127 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_1608_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(11578..11811)
DNA (234bp) protein (78aa)
ATP synthase F0 subunit C; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14] Tax=GWF2_RBX1_38_17_curated
ATP synthase F0, C subunit id=2172697 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ATP synthase F0 subunit C
GWD2_RBX1_39_127_gwd2_scaffold_1608_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(11828..12535)
DNA (708bp) protein (236aa)
ATP synthase F0, subunit A; K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14] Tax=GWF2_RBX1_38_17_curated
ATP synthase subunit a id=2172699 bin=GWE2_RBX1_39_32 species=Leptospirillum ferrooxidans genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ATP synthase F0 subunit A
Displaying 18 items

View Taxonomy