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GWD2_RBX1_39_127_gwd2_scaffold_548

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_548_trna_1
unknown

Not on your lists

comp(96..169)
DNA (74bp)
transferRNA
GWD2_RBX1_39_127_gwd2_scaffold_548_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(309..1901)
DNA (1593bp) protein (531aa)
methyl-accepting chemotaxis sensory transducer id=24610875 bin=RAAC11 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
methyl-accepting chemotaxis sensory transducer Tax=GWF2_RBX1_38_17_curated
methyl-accepting chemotaxis sensory transducer
GWD2_RBX1_39_127_gwd2_scaffold_548_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(2090..4210)
DNA (2121bp) protein (707aa)
DNA topoisomerase III; K03169 DNA topoisomerase III [EC:5.99.1.2] id=24610876 bin=RAAC11 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=RAAC11 organism_group=Unknown_CP
DNA topoisomerase III; K03169 DNA topoisomerase III [EC:5.99.1.2] Tax=GWF2_RBX1_38_17_curated
topB: DNA topoisomerase III
GWD2_RBX1_39_127_gwd2_scaffold_548_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(4361..5407)
DNA (1047bp) protein (349aa)
Putative uncharacterized protein id=3180116 bin=GWF2_OP9-related_38_17 species=Leptolyngbya sp. PCC 6406 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
hypothetical protein CHP00730; K06966 Tax=GWF2_RBX1_38_17_curated
hypothetical protein CHP00730
GWD2_RBX1_39_127_gwd2_scaffold_548_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(5698..6744)
DNA (1047bp) protein (349aa)
Putative uncharacterized protein id=2161547 bin=GWE2_RBX1_39_32 species=Oscillatoria sp. PCC 6506 genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_548_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(7009..7461)
DNA (453bp) protein (151aa)
Anti-sigma-factor antagonist id=2161545 bin=GWE2_RBX1_39_32 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
anti-sigma-factor antagonist Tax=GWF2_RBX1_38_17_curated
anti-sigma-factor antagonist
GWD2_RBX1_39_127_gwd2_scaffold_548_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(7467..9008)
DNA (1542bp) protein (514aa)
alkaline phosphatase synthesis sensor protein PhoR (EC:2.7.3.-) Tax=GWF2_RBX1_38_17_curated
alkaline phosphatase synthesis sensor protein PhoR (EC:2.7.3.-)
Alkaline phosphatase synthesis sensor protein PhoR id=2161542 bin=GWE2_RBX1_39_32 species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_548_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

9507..10631
DNA (1125bp) protein (375aa)
Histidinol-phosphate aminotransferase id=2161539 bin=GWE2_RBX1_39_32 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
histidinol-phosphate aminotransferase Tax=GWF2_RBX1_38_17_curated
histidinol-phosphate aminotransferase
GWD2_RBX1_39_127_gwd2_scaffold_548_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

10668..11726
DNA (1059bp) protein (353aa)
glycine cleavage system T protein; K00605 aminomethyltransferase [EC:2.1.2.10] Tax=GWF2_RBX1_38_17_curated
Aminomethyltransferase id=2161536 bin=GWE2_RBX1_39_32 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
glycine cleavage system T protein
GWD2_RBX1_39_127_gwd2_scaffold_548_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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11794..12177
DNA (384bp) protein (128aa)
Glycine cleavage system H protein id=2038461 bin=GWD2_RBX1-related_39_127 species=Bacillus megaterium genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
gcvH; glycine cleavage system H protein; K02437 glycine cleavage system H protein Tax=GWF2_RBX1_38_17_curated
gcvH; glycine cleavage system H protein
GWD2_RBX1_39_127_gwd2_scaffold_548_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

12182..13483
DNA (1302bp) protein (434aa)
glycine dehydrogenase subunit 1 (EC:1.4.4.2); K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2] Tax=GWF2_RBX1_38_17_curated
glycine dehydrogenase subunit 1 (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 1 id=2161531 bin=GWE2_RBX1_39_32 species=Desulfotomaculum reducens genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_548_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

13495..14946
DNA (1452bp) protein (484aa)
glycine cleavage system P protein (EC:1.4.4.2) Tax=GWF2_RBX1_38_17_curated
gcvPB; glycine dehydrogenase [decarboxylating] subunit 2 (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 2 id=2161529 bin=GWE2_RBX1_39_32 species=[Clostridium] stercorarium genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_548_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

14964..15737
DNA (774bp) protein (258aa)
lipoate protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] Tax=GWF2_RBX1_38_17_curated
lipM; octanoyltransferase LipM (EC:2.3.1.181)
Octanoyltransferase LipM id=2161527 bin=GWE2_RBX1_39_32 species=Brevibacillus laterosporus genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_548_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(15784..16167)
DNA (384bp) protein (128aa)
id=2161526 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2161526 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_548_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(16695..17687)
DNA (993bp) protein (331aa)
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=GWF2_RBX1_38_17_curated
Glycerol-3-phosphate dehydrogenase [NAD(P)+] id=2161524 bin=GWE2_RBX1_39_32 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
GWD2_RBX1_39_127_gwd2_scaffold_548_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(17884..23109)
DNA (5226bp) protein (1742aa)
serine/threonine protein kinase id=2038515 bin=GWD2_RBX1-related_39_127 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
multi-sensor signal transduction multi-kinase Tax=GWF2_RBX1_38_17_curated
serine/threonine kinase
GWD2_RBX1_39_127_gwd2_scaffold_548_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(23235..23606)
DNA (372bp) protein (124aa)
Response regulator id=2161520 bin=GWE2_RBX1_39_32 species=Vibrio caribbenthicus genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
response regulator receiver protein Tax=GWF2_RBX1_38_17_curated
response regulator receiver protein
GWD2_RBX1_39_127_gwd2_scaffold_548_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

24043..25833
DNA (1791bp) protein (597aa)
PAS/PAC sensor signal transduction histidine kinase id=2161518 bin=GWE2_RBX1_39_32 species=Coprothermobacter proteolyticus genus=Coprothermobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
PAS/PAC sensor signal transduction histidine kinase Tax=GWF2_RBX1_38_17_curated
PAS/PAC sensor signal transduction histidine kinase
GWD2_RBX1_39_127_gwd2_scaffold_548_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(25830..27359)
DNA (1530bp) protein (510aa)
Mg chelatase, subunit ChlI id=2038520 bin=GWD2_RBX1-related_39_127 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Mg chelatase subunit ChlI Tax=GWF2_RBX1_38_17_curated
Mg chelatase subunit ChlI
GWD2_RBX1_39_127_gwd2_scaffold_548_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

27423..27590
DNA (168bp) protein (56aa)
id=24610269 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24610269 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_548_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

27556..29790
DNA (2235bp) protein (745aa)
Lytic transglycosylase catalytic id=2161514 bin=GWE2_RBX1_39_32 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
lytic murein transglycosylase Tax=GWF2_RBX1_38_17_curated
lytic murein transglycosylase
Displaying 21 items

View Taxonomy