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GWD2_RBX1_39_127_gwd2_scaffold_65

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Displaying items 1-30 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_65_trna_1
unknown

Not on your lists

comp(294..366)
DNA (73bp)
transferRNA
GWD2_RBX1_39_127_gwd2_scaffold_65_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(552..1274)
DNA (723bp) protein (241aa)
id=2018632 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2018632 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_65_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

1537..1815
DNA (279bp) protein (93aa)
id=2018631 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2018631 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_65_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

1812..3539
DNA (1728bp) protein (576aa)
Radical SAM domain-containing protein id=2078477 bin=GWD2_RBX1-related_39_127 species=Fusobacterium mortiferum genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
radical SAM protein Tax=GWF2_RBX1_38_17_curated
radical SAM protein
GWD2_RBX1_39_127_gwd2_scaffold_65_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(3564..3695)
DNA (132bp) protein (44aa)
id=2018629 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2018629 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_65_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(3749..4891)
DNA (1143bp) protein (381aa)
Response regulator receiver sensor signal transduction histidine kinase id=2018628 bin=GWE2_RBX1_39_32 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
histidine kinase Tax=GWF2_RBX1_38_17_curated
ATP-binding region ATPase domain protein
GWD2_RBX1_39_127_gwd2_scaffold_65_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(4905..5960)
DNA (1056bp) protein (352aa)
Chemotaxis response regulator protein-glutamate methylesterase id=2078483 bin=GWD2_RBX1-related_39_127 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
chemotaxis protein CheY Tax=GWF2_RBX1_38_17_curated
chemotaxis protein CheY
GWD2_RBX1_39_127_gwd2_scaffold_65_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

6259..7818
DNA (1560bp) protein (520aa)
L-aspartate oxidase; K00278 L-aspartate oxidase [EC:1.4.3.16] Tax=GWF2_RBX1_38_17_curated
L-aspartate oxidase id=2018626 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
L-aspartate oxidase
GWD2_RBX1_39_127_gwd2_scaffold_65_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(7807..8991)
DNA (1185bp) protein (395aa)
proposed homoserine kinase; K15635 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=GWF2_RBX1_38_17_curated
Proposed homoserine kinase id=2018625 bin=GWE2_RBX1_39_32 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
homoserine kinase
GWD2_RBX1_39_127_gwd2_scaffold_65_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(9102..10160)
DNA (1059bp) protein (353aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] Tax=GWF2_RBX1_38_17_curated
Threonine synthase id=2078489 bin=GWD2_RBX1-related_39_127 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
threonine synthase
GWD2_RBX1_39_127_gwd2_scaffold_65_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(10234..10809)
DNA (576bp) protein (192aa)
3-methyladenine DNA glycosylase (EC:3.2.2.21); K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21] id=24609794 bin=RAAC11 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
3-methyladenine DNA glycosylase (EC:3.2.2.21); K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21] Tax=GWF2_RBX1_38_17_curated
3-methyladenine DNA glycosylase (EC:3.2.2.21)
GWD2_RBX1_39_127_gwd2_scaffold_65_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(10811..11350)
DNA (540bp) protein (180aa)
Colicin V production protein id=2078493 bin=GWD2_RBX1-related_39_127 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
colicin v production protein; K03558 membrane protein required for colicin V production Tax=GWF2_RBX1_38_17_curated
colicin v production protein
GWD2_RBX1_39_127_gwd2_scaffold_65_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(11353..11799)
DNA (447bp) protein (149aa)
purE_2; phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21); K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] Tax=GWF2_RBX1_38_17_curated
N5-carboxyaminoimidazole ribonucleotide mutase id=2018616 bin=GWE2_RBX1_39_32 species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
N5-carboxyaminoimidazole ribonucleotide mutase
GWD2_RBX1_39_127_gwd2_scaffold_65_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

12157..12531
DNA (375bp) protein (125aa)
Response regulator receiver id=2018614 bin=GWE2_RBX1_39_32 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
response regulator receiver protein Tax=GWF2_RBX1_38_17_curated
response regulator receiver protein
GWD2_RBX1_39_127_gwd2_scaffold_65_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(12553..13614)
DNA (1062bp) protein (354aa)
Type II secretion system protein id=2018612 bin=GWE2_RBX1_39_32 species=Bacillus azotoformans genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Type II secretion system protein Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_65_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(13586..14356)
DNA (771bp) protein (257aa)
TatD DNase family protein id=24609789 bin=RAAC11 species=Bacillus amyloliquefaciens genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
TatD DNase family protein Tax=GWF2_RBX1_38_17_curated
yabD; putative deoxyribonuclease YabD
GWD2_RBX1_39_127_gwd2_scaffold_65_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists


comp(14356..15906)
DNA (1551bp) protein (517aa)
methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=GWF2_RBX1_38_17_curated
Methionine--tRNA ligase id=2078503 bin=GWD2_RBX1-related_39_127 species=Thermovirga lienii genus=Thermovirga taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
methionyl-tRNA synthetase
GWD2_RBX1_39_127_gwd2_scaffold_65_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

16129..16497
DNA (369bp) protein (123aa)
Response regulator id=2018606 bin=GWE2_RBX1_39_32 species=unknown genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
response regulator receiver protein; K03413 two-component system, chemotaxis family, response regulator CheY Tax=GWF2_RBX1_38_17_curated
response regulator receiver protein
GWD2_RBX1_39_127_gwd2_scaffold_65_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists


16601..16918
DNA (318bp) protein (106aa)
30S ribosomal protein S6 id=2018570 bin=GWE2_RBX1_39_32 species=Clostridium acetobutylicum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
rpsF; 30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 Tax=GWF2_RBX1_38_17_curated
rpsF; 30S ribosomal protein S6
GWD2_RBX1_39_127_gwd2_scaffold_65_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

16919..17353
DNA (435bp) protein (145aa)
Single-stranded DNA-binding protein id=2078507 bin=GWD2_RBX1-related_39_127 species=Desulfosporosinus youngiae genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
single-strand binding protein; K03111 single-strand DNA-binding protein Tax=GWF2_RBX1_38_17_curated
single-strand binding protein
GWD2_RBX1_39_127_gwd2_scaffold_65_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

17385..17759
DNA (375bp) protein (125aa)
Single-stranded DNA-binding protein id=2078510 bin=GWD2_RBX1-related_39_127 species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
ssDNA-binding protein; K03111 single-strand DNA-binding protein Tax=GWF2_RBX1_38_17_curated
ssb_1; helix-destabilizing protein
GWD2_RBX1_39_127_gwd2_scaffold_65_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists


17824..18060
DNA (237bp) protein (79aa)
30S ribosomal protein S18 id=2078513 bin=GWD2_RBX1-related_39_127 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 Tax=GWF2_RBX1_38_17_curated
rpsR; ribosomal protein S18
GWD2_RBX1_39_127_gwd2_scaffold_65_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists


18100..18582
DNA (483bp) protein (161aa)
50S ribosomal protein L9 id=2078516 bin=GWD2_RBX1-related_39_127 species=Desulfovibrio piger genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 Tax=GWF2_RBX1_38_17_curated
50S ribosomal protein L9
GWD2_RBX1_39_127_gwd2_scaffold_65_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

18661..20433
DNA (1773bp) protein (591aa)
UvrABC system protein C id=2078520 bin=GWD2_RBX1-related_39_127 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
excinuclease ABC subunit C; K03703 excinuclease ABC subunit C Tax=GWF2_RBX1_38_17_curated
excinuclease ABC subunit C
GWD2_RBX1_39_127_gwd2_scaffold_65_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

20450..21586
DNA (1137bp) protein (379aa)
M23B-like peptidase id=24609780 bin=RAAC11 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
M23B-like peptidase Tax=GWF2_RBX1_38_17_curated
M23B-like peptidase
GWD2_RBX1_39_127_gwd2_scaffold_65_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

21603..22853
DNA (1251bp) protein (417aa)
carboxyl-terminal protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] id=24609779 bin=RAAC11 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=RAAC11 organism_group=Unknown_CP
carboxyl-terminal protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=GWF2_RBX1_38_17_curated
carboxyl-terminal protease (EC:3.4.21.102)
GWD2_RBX1_39_127_gwd2_scaffold_65_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

22975..24384
DNA (1410bp) protein (470aa)
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain i id=24609778 bin=RAAC11 species=Caldicellulosiruptor kristjanssonii genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain i Tax=GWF2_RBX1_38_17_curated
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain i
GWD2_RBX1_39_127_gwd2_scaffold_65_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

24639..25577
DNA (939bp) protein (313aa)
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=GWF2_RBX1_38_17_curated
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase id=2078533 bin=GWD2_RBX1-related_39_127 species=unknown genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_65_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

25574..26863
DNA (1290bp) protein (430aa)
dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=GWF2_RBX1_38_17_curated
dihydroorotase (EC:3.5.2.3)
Dihydroorotase id=2078539 bin=GWD2_RBX1-related_39_127 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_65_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

26895..28043
DNA (1149bp) protein (383aa)
carA; carbamoyl phosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] id=24609775 bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RAAC11 organism_group=Unknown_CP
carA; carbamoyl phosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] Tax=GWF2_RBX1_38_17_curated
carA; carbamoyl phosphate synthase small subunit
Displaying items 1-30 of 101 in total

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