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GWD2_RBX1_39_127_gwd2_scaffold_379

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Displaying items 1-30 of 108 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_379_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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100..960
DNA (861bp) protein (287aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily id=1959946 bin=GWD2_RBX1-related_39_127 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
putative hydrolase or acyltransferase of alpha/beta superfamily Tax=GWF2_RBX1_38_17_curated
putative hydrolase or acyltransferase of alpha/beta superfamily
GWD2_RBX1_39_127_gwd2_scaffold_379_trna_3
unknown

Not on your lists

comp(978..1051)
DNA (74bp)
transferRNA
GWD2_RBX1_39_127_gwd2_scaffold_379_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(1118..1987)
DNA (870bp) protein (290aa)
id=1959949 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=1751764 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_379_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(1953..3758)
DNA (1806bp) protein (602aa)
peptidase S8 and S53 subtilisin kexin sedolisin Tax=GWF2_RBX1_38_17_curated
Peptidase S8 and S53 subtilisin kexin sedolisin id=1751765 bin=GWE2_RBX1_39_32 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
peptidase S8 and S53 subtilisin kexin sedolisin
GWD2_RBX1_39_127_gwd2_scaffold_379_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(3907..5157)
DNA (1251bp) protein (417aa)
id=1751766 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1751766 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_379_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(5174..5956)
DNA (783bp) protein (261aa)
id=1751767 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1751767 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_379_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(6191..8170)
DNA (1980bp) protein (660aa)
UvrABC system protein B id=1959955 bin=GWD2_RBX1-related_39_127 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Excinuclease ABC subunit B; K03702 excinuclease ABC subunit B Tax=GWF2_RBX1_38_17_curated
Excinuclease ABC subunit B
GWD2_RBX1_39_127_gwd2_scaffold_379_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

8420..8800
DNA (381bp) protein (127aa)
Response regulator containing a CheY-like receiver domain and an HD-GYP domain id=24608466 bin=RAAC11 species=[Ruminococcus] torques genus=Blautia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
Response regulator containing a CheY-like receiver domain and an HD-GYP domain Tax=GWF2_RBX1_38_17_curated
Response regulator containing a CheY-like receiver domain and an HD-GYP domain
GWD2_RBX1_39_127_gwd2_scaffold_379_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

8877..9440
DNA (564bp) protein (188aa)
id=1751770 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1751770 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_379_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

9557..10831
DNA (1275bp) protein (425aa)
fo synthase subunit 1 (EC:2.5.1.-); K11780 FO synthase subunit 1 [EC:2.5.1.77] Tax=GWF2_RBX1_38_17_curated
fo synthase subunit 1 (EC:2.5.1.-)
FO synthase subunit 1 id=1751771 bin=GWE2_RBX1_39_32 species=Methanothermus fervidus genus=Methanothermus taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_379_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(10837..13182)
DNA (2346bp) protein (782aa)
Putative uncharacterized protein id=1751772 bin=GWE2_RBX1_39_32 species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_379_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

13606..14796
DNA (1191bp) protein (397aa)
tryptophan synthase subunit beta; K01696 tryptophan synthase beta chain [EC:4.2.1.20] Tax=GWF2_RBX1_38_17_curated
Tryptophan synthase beta chain id=1960007 bin=GWD2_RBX1-related_39_127 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
tryptophan synthase subunit beta
GWD2_RBX1_39_127_gwd2_scaffold_379_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

14829..15629
DNA (801bp) protein (267aa)
tryptophan synthase, alpha chain (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20] id=24608461 bin=RAAC11 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
tryptophan synthase, alpha chain (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20] Tax=GWF2_RBX1_38_17_curated
tryptophan synthase subunit alpha (EC:4.2.1.20)
GWD2_RBX1_39_127_gwd2_scaffold_379_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

15677..16204
DNA (528bp) protein (176aa)
Metal-dependent phosphohydrolase HD sub domain-containing protein id=1751805 bin=GWE2_RBX1_39_32 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
putative metal dependent phosphohydrolase Tax=GWF2_RBX1_38_17_curated
metal dependent phosphohydrolase
GWD2_RBX1_39_127_gwd2_scaffold_379_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(16201..17004)
DNA (804bp) protein (268aa)
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=GWF2_RBX1_38_17_curated
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase id=4072423 bin=GWF2_OP9-related_38_17 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
GWD2_RBX1_39_127_gwd2_scaffold_379_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(17005..17532)
DNA (528bp) protein (176aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=GWF2_RBX1_38_17_curated
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase id=1960015 bin=GWD2_RBX1-related_39_127 species=Phycisphaera mikurensis genus=Phycisphaera taxon_order=Phycisphaerales taxon_class=Phycisphaerae phylum=Planctomycetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_379_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists


comp(17546..18187)
DNA (642bp) protein (214aa)
50S ribosomal protein L25 id=1751817 bin=GWE2_RBX1_39_32 species=Bacillus pseudofirmus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ctc; 50S ribosomal protein L25/general stress protein Ctc; K02897 large subunit ribosomal protein L25 Tax=GWF2_RBX1_38_17_curated
ctc; 50S ribosomal protein L25/general stress protein Ctc
GWD2_RBX1_39_127_gwd2_scaffold_379_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(18345..19259)
DNA (915bp) protein (305aa)
dihydroorotate dehydrogenase; K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=GWF2_RBX1_38_17_curated
Dihydroorotate dehydrogenase id=1751822 bin=GWE2_RBX1_39_32 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
dihydroorotate dehydrogenase
GWD2_RBX1_39_127_gwd2_scaffold_379_18
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

comp(19513..20802)
DNA (1290bp) protein (430aa)
two component system sensor histidine kinase, hybrid (EC:2.7.13.3) id=24608455 bin=RAAC11 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
sensor histidine kinase (EC:2.7.3.-) Tax=GWF2_RBX1_35_9_curated
two component system sensor histidine kinase, hybrid (EC:2.7.13.3)
GWD2_RBX1_39_127_gwd2_scaffold_379_19
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

comp(20930..23239)
DNA (2310bp) protein (770aa)
signal transduction histidine kinase; K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=GWF2_RBX1_35_9_curated
PAS/PAC sensor signal transduction histidine kinase id=24608454 bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=RAAC11 organism_group=Unknown_CP
PAS/PAC sensor signal transduction histidine kinase
GWD2_RBX1_39_127_gwd2_scaffold_379_20
GWC2_Nitrospirae_42_7_curated, Nitrospirae, Bacteria

Not on your lists

comp(23239..24372)
DNA (1134bp) protein (378aa)
L-alanine-DL-glutamate epimerase-like protein id=24608453 bin=RAAC11 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RAAC11 organism_group=Unknown_CP
L-alanine-DL-glutamate epimerase-like protein Tax=GWC2_Nitrospirae_42_7_curated
L-alanine-DL-glutamate epimerase-like protein
GWD2_RBX1_39_127_gwd2_scaffold_379_21
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24320..25279)
DNA (960bp) protein (320aa)
lipid A biosynthesis acyltransferase id=24608452 bin=RAAC11 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
lipid A biosynthesis acyltransferase
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:AEB09787.1}; TaxID=880072 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Des
GWD2_RBX1_39_127_gwd2_scaffold_379_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

25661..26032
DNA (372bp) protein (124aa)
Signal transduction protein containing REC and EAL domains id=1979095 bin=GWE2_RBX1_39_32 species=Thalassospira xiamenensis genus=Thalassospira taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Fis family two component sigma-54 specific transcriptional regulator Tax=GWF2_RBX1_38_17_curated
signal transduction protein containing REC and EAL domains
GWD2_RBX1_39_127_gwd2_scaffold_379_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(26072..26269)
DNA (198bp) protein (66aa)
id=1979094 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1979094 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_379_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(26721..27176)
DNA (456bp) protein (152aa)
Transcriptional regulator, MarR family id=1979091 bin=GWE2_RBX1_39_32 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
MarR family transcriptional regulator Tax=GWF2_RBX1_38_17_curated
MarR family transcriptional regulator
GWD2_RBX1_39_127_gwd2_scaffold_379_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(27354..27764)
DNA (411bp) protein (137aa)
id=24608448 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24608448 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_379_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(27871..28590)
DNA (720bp) protein (240aa)
id=1979088 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=4440276 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_379_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

28749..29561
DNA (813bp) protein (271aa)
Putative uncharacterized protein id=1979085 bin=GWE2_RBX1_39_32 species=Staphylococcus carnosus genus=Staphylococcus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein; K07058 membrane protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_379_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

29585..31312
DNA (1728bp) protein (576aa)
PHP C-terminal domain protein id=1960039 bin=GWD2_RBX1-related_39_127 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
PHP domain-containing protein; K02347 DNA polymerase (family X) Tax=GWF2_RBX1_38_17_curated
PHP domain-containing protein
GWD2_RBX1_39_127_gwd2_scaffold_379_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

31370..32044
DNA (675bp) protein (225aa)
endonuclease III (EC:3.2.2.-); K10773 endonuclease III [EC:4.2.99.18] Tax=GWF2_RBX1_38_17_curated
endonuclease III (EC:3.2.2.-)
Endonuclease III id=1960045 bin=GWD2_RBX1-related_39_127 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Displaying items 1-30 of 108 in total

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