ggKbase home page

GWD2_RBX1_39_127_gwd2_scaffold_973

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_973_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(242..523)
DNA (282bp) protein (94aa)
Transcriptional regulator, ArsR family id=2039924 bin=GWE2_RBX1_39_32 species=Clostridium cellulovorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator Tax=GWF2_RBX1_38_17_curated
ArsR family transcriptional regulator
GWD2_RBX1_39_127_gwd2_scaffold_973_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

844..1986
DNA (1143bp) protein (381aa)
id=24609725 Tax=GWF2_RBX1_38_17_curated
id=24609725 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
GWD2_RBX1_39_127_gwd2_scaffold_973_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(1995..2705)
DNA (711bp) protein (237aa)
sec59; dolichol kinase id=24609726 bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=RAAC11 organism_group=Unknown_CP
sec59; dolichol kinase Tax=GWF2_RBX1_38_17_curated
sec59; dolichol kinase
GWD2_RBX1_39_127_gwd2_scaffold_973_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(2816..4504)
DNA (1689bp) protein (563aa)
Methyl-accepting chemotaxis sensory transducer with Cache sensor id=2039929 bin=GWE2_RBX1_39_32 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
PAS domain-containing protein Tax=GWF2_RBX1_38_17_curated
PAS domain-containing protein
GWD2_RBX1_39_127_gwd2_scaffold_973_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

4705..6024
DNA (1320bp) protein (440aa)
Oxidoreductase NAD-binding domain protein id=2039931 bin=GWE2_RBX1_39_32 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
oxidoreductase FAD/NAD(P)-binding domain-containing protein Tax=GWF2_RBX1_38_17_curated
oxidoreductase FAD/NAD(P)-binding domain-containing protein
GWD2_RBX1_39_127_gwd2_scaffold_973_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

6038..6136
DNA (99bp) protein (33aa)
id=2154937 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=2039934 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_973_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(6288..6746)
DNA (459bp) protein (153aa)
Uncharacterized protein id=1869107 bin=GWE2_RBX1_39_32 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hemerythrin HHE cation binding domain protein Tax=GWF2_RBX1_38_17_curated
hemerythrin HHE cation binding domain protein
GWD2_RBX1_39_127_gwd2_scaffold_973_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

7007..7672
DNA (666bp) protein (222aa)
Transport-associated protein id=1869110 bin=GWE2_RBX1_39_32 species=Nodularia spumigena genus=Nodularia taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
transport-associated protein Tax=GWF2_RBX1_38_17_curated
transport-associated protein
GWD2_RBX1_39_127_gwd2_scaffold_973_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(7679..8311)
DNA (633bp) protein (211aa)
Putative uncharacterized protein id=2154945 bin=GWD2_RBX1-related_39_127 species=Methanosarcina barkeri genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_973_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(8359..9030)
DNA (672bp) protein (224aa)
Phosphoribosyl transferase domain protein id=24608281 bin=RAAC11 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RAAC11 organism_group=Unknown_CP
Phosphoribosyl transferase domain protein Tax=GWF2_RBX1_38_17_curated
Phosphoribosyl transferase domain protein
GWD2_RBX1_39_127_gwd2_scaffold_973_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

9479..10171
DNA (693bp) protein (231aa)
Peptide methionine sulfoxide reductase MsrA id=1869119 bin=GWE2_RBX1_39_32 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
methionine-S-sulfoxide reductase Tax=GWF2_RBX1_38_17_curated
methionine-S-sulfoxide reductase
GWD2_RBX1_39_127_gwd2_scaffold_973_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(10183..11064)
DNA (882bp) protein (294aa)
Putative uncharacterized protein id=1869122 bin=GWE2_RBX1_39_32 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_973_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

11488..12414
DNA (927bp) protein (309aa)
Import inner membrane translocase, subunit Tim44 id=2154987 bin=GWD2_RBX1-related_39_127 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
import inner membrane translocase subunit Tim44 Tax=GWF2_RBX1_38_17_curated
import inner membrane translocase subunit Tim44
GWD2_RBX1_39_127_gwd2_scaffold_973_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

12710..14230
DNA (1521bp) protein (507aa)
Outer membrane protein-like protein id=2154988 bin=GWD2_RBX1-related_39_127 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Outer membrane protein-like Tax=GWF2_RBX1_38_17_curated
Outer membrane protein-like
GWD2_RBX1_39_127_gwd2_scaffold_973_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(14279..15241)
DNA (963bp) protein (321aa)
Patatin id=2154989 bin=GWD2_RBX1-related_39_127 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
patatin Tax=GWF2_RBX1_38_17_curated
patatin
GWD2_RBX1_39_127_gwd2_scaffold_973_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(15433..17772)
DNA (2340bp) protein (780aa)
Ca2+-binding protein, RTX toxin id=2154990 bin=GWD2_RBX1-related_39_127 species=Oscillatoriales cyanobacterium JSC-12 genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
putative calcium-binding protein Tax=GWF2_RBX1_38_17_curated
putative calcium-binding protein
Displaying 16 items

View Taxonomy