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GWD2_RBX1_39_127_gwd2_scaffold_154

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Displaying items 1-30 of 60 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_154_1

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comp(1..378)
DNA (378bp) protein (126aa)
PilT protein domain protein id=1859152 bin=GWE2_RBX1_39_32 species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Marine sediment metagenome DNA, contig: S06H3_S04757 {ECO:0000313|EMBL:GAI29205.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
PilT protein domain-containing protein
GWD2_RBX1_39_127_gwd2_scaffold_154_2
unknown

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comp(382..729)
DNA (348bp) protein (116aa)
id=24609341 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24609341 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
GWD2_RBX1_39_127_gwd2_scaffold_154_3
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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753..1208
DNA (456bp) protein (152aa)
Uncharacterized protein id=1859159 bin=GWE2_RBX1_39_32 species=Fusobacterium necrophorum genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:CDX02168.1}; TaxID=49338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_154_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(1926..2207)
DNA (282bp) protein (94aa)
id=24609343 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24609343 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_154_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(2222..2467)
DNA (246bp) protein (82aa)
id=1859162 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=24609344 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_154_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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2745..3194
DNA (450bp) protein (150aa)
Mobile mystery protein A id=1859163 bin=GWE2_RBX1_39_32 species=Treponema succinifaciens genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
mobile mystery protein A Tax=GWF2_RBX1_38_17_curated
mobile mystery protein A
GWD2_RBX1_39_127_gwd2_scaffold_154_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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3188..3802
DNA (615bp) protein (205aa)
Cell filamentation protein Fic id=1803794 bin=GWD2_RBX1-related_39_127 species=Sulfurimonas gotlandica genus=Sulfurimonas taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_154_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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3913..4743
DNA (831bp) protein (277aa)
NAD(+) diphosphatase (EC:3.6.1.22); K03426 NAD+ diphosphatase [EC:3.6.1.22] Tax=GWF2_RBX1_38_17_curated
NAD(+) diphosphatase (EC:3.6.1.22)
NAD(+) diphosphatase id=1803796 bin=GWD2_RBX1-related_39_127 species=Ilyobacter polytropus genus=Ilyobacter taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_154_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(4864..5067)
DNA (204bp) protein (68aa)
Cold shock protein CspA id=1803798 bin=GWD2_RBX1-related_39_127 species=Vibrio furnissii genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
cold-shock protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=GWF2_RBX1_38_17_curated
cold-shock protein
GWD2_RBX1_39_127_gwd2_scaffold_154_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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5265..6137
DNA (873bp) protein (291aa)
methylase involved in ubiquinone/menaquinone biosynthesis; K00563 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] Tax=GWF2_RBX1_38_17_curated
Methylase involved in ubiquinone/menaquinone biosynthesis id=1803799 bin=GWD2_RBX1-related_39_127 species=Clostridium sp. BNL1100 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
methylase involved in ubiquinone/menaquinone biosynthesis
GWD2_RBX1_39_127_gwd2_scaffold_154_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(6120..8996)
DNA (2877bp) protein (959aa)
malto-oligosyltrehalose synthase (EC:3.2.1.20 5.4.99.15); K06044 (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] Tax=GWF2_RBX1_38_17_curated
malto-oligosyltrehalose synthase (EC:3.2.1.20 5.4.99.15)
Malto-oligosyltrehalose synthase id=1803800 bin=GWD2_RBX1-related_39_127 species=Nostoc punctiforme genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_154_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(8996..11422)
DNA (2427bp) protein (809aa)
Putative uncharacterized protein id=1803801 bin=GWD2_RBX1-related_39_127 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
glycoside hydrolase family protein Tax=GWF2_RBX1_38_17_curated
glycoside hydrolase family protein
GWD2_RBX1_39_127_gwd2_scaffold_154_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(11434..13269)
DNA (1836bp) protein (612aa)
maltooligosyl trehalose hydrolase (EC:3.2.1.141) Tax=GWF2_RBX1_38_17_curated
maltooligosyl trehalose hydrolase (EC:3.2.1.141)
Malto-oligosyltrehalose trehalohydrolase id=1803802 bin=GWD2_RBX1-related_39_127 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_154_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(13385..14386)
DNA (1002bp) protein (334aa)
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12) Tax=GWF2_RBX1_38_17_curated
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase id=1859185 bin=GWE2_RBX1_39_32 species=Oscillatoria sp. PCC 6506 genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_154_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(14537..14932)
DNA (396bp) protein (132aa)
desulfoferrodoxin ferrous iron-binding region; K05919 superoxide reductase [EC:1.15.1.2] id=24609354 bin=RAAC11 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
desulfoferrodoxin ferrous iron-binding region; K05919 superoxide reductase [EC:1.15.1.2] Tax=GWF2_RBX1_38_17_curated
desulfoferrodoxin ferrous iron-binding region
GWD2_RBX1_39_127_gwd2_scaffold_154_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(14945..15421)
DNA (477bp) protein (159aa)
Putative uncharacterized protein id=1859189 bin=GWE2_RBX1_39_32 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ferritin-like protein Tax=GWF2_RBX1_38_17_curated
ferritin-like protein
GWD2_RBX1_39_127_gwd2_scaffold_154_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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15557..16492
DNA (936bp) protein (312aa)
Uncharacterized protein id=1803830 bin=GWD2_RBX1-related_39_127 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_154_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(16508..17089)
DNA (582bp) protein (194aa)
UPF0316 protein Cthe_2213 id=1803833 bin=GWD2_RBX1-related_39_127 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_154_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(17180..17506)
DNA (327bp) protein (109aa)
hypothetical protein; K09922 hypothetical protein id=24610980 bin=RAAC11 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=RAAC11 organism_group=Unknown_CP
hypothetical protein; K09922 hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_154_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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17728..18450
DNA (723bp) protein (241aa)
Putative membrane protein id=1803836 bin=GWD2_RBX1-related_39_127 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_154_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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18679..19176
DNA (498bp) protein (166aa)
flavodoxin; K00230 menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] Tax=GWF2_RBX1_38_17_curated
Flavodoxin/nitric oxide synthase id=1859197 bin=GWE2_RBX1_39_32 species=Methanofollis liminatans genus=Methanofollis taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
flavodoxin
GWD2_RBX1_39_127_gwd2_scaffold_154_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(19184..20041)
DNA (858bp) protein (286aa)
id=1859199 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1859199 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_154_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(20043..20738)
DNA (696bp) protein (232aa)
Potassium uptake protein KtrA id=1859200 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
potassium uptake protein KtrA Tax=GWF2_RBX1_38_17_curated
potassium uptake protein KtrA
GWD2_RBX1_39_127_gwd2_scaffold_154_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(20786..22123)
DNA (1338bp) protein (446aa)
Cation transport protein id=1859239 bin=GWE2_RBX1_39_32 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
cation transport protein; K03498 trk system potassium uptake protein TrkH Tax=GWF2_RBX1_38_17_curated
cation transport protein
GWD2_RBX1_39_127_gwd2_scaffold_154_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(22460..22846)
DNA (387bp) protein (129aa)
Putative uncharacterized protein id=1803852 bin=GWD2_RBX1-related_39_127 species=Haloterrigena turkmenica genus=Haloterrigena taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
sporulation protein YtfJ Tax=GWF2_RBX1_38_17_curated
sporulation protein YtfJ
GWD2_RBX1_39_127_gwd2_scaffold_154_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(22977..23903)
DNA (927bp) protein (309aa)
Putative uncharacterized protein id=1803855 bin=GWD2_RBX1-related_39_127 species=Nostoc punctiforme genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein; K07027 Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_154_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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24179..24802
DNA (624bp) protein (208aa)
MotA/TolQ/ExbB proton channel id=1859256 bin=GWE2_RBX1_39_32 species=Denitrovibrio acetiphilus genus=Denitrovibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
MotA/TolQ/ExbB proton channel; K03561 biopolymer transport protein ExbB Tax=GWF2_RBX1_38_17_curated
MotA/TolQ/ExbB proton channel
GWD2_RBX1_39_127_gwd2_scaffold_154_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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24805..25209
DNA (405bp) protein (135aa)
Transport energizing protein, ExbD/TolR family id=1859259 bin=GWE2_RBX1_39_32 species=Desulfovibrio salexigens genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD Tax=GWF2_RBX1_38_17_curated
biopolymer transport protein ExbD/TolR
GWD2_RBX1_39_127_gwd2_scaffold_154_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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25206..25862
DNA (657bp) protein (219aa)
TonB family protein id=1859262 bin=GWE2_RBX1_39_32 species=Acidithiobacillus ferrooxidans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
TonB family protein; K03832 periplasmic protein TonB Tax=GWF2_RBX1_38_17_curated
TonB family protein
GWD2_RBX1_39_127_gwd2_scaffold_154_30
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

25911..27071
DNA (1161bp) protein (387aa)
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein id=24610991 bin=RAAC11 species=Gramella forsetii genus=Gramella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=RAAC11 organism_group=Unknown_CP
hypothetical protein
Displaying items 1-30 of 60 in total

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