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GWD2_RBX1_39_127_gwd2_scaffold_207

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_207_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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242..952
DNA (711bp) protein (237aa)
purC; Phosphoribosylaminoimidazole-succinocarboxamidesynthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase id=1853745 bin=GWD2_RBX1-related_39_127 species=Ethanoligenens harbinense genus=Ethanoligenens taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Phosphoribosylaminoimidazole-succinocarboxamide synthase Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_207_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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1087..1374
DNA (288bp) protein (96aa)
Putative uncharacterized protein id=1853746 bin=GWD2_RBX1-related_39_127 species=unknown genus=Lyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_207_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

1402..1611
DNA (210bp) protein (70aa)
id=2068595 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2068595 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_207_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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1795..4152
DNA (2358bp) protein (786aa)
alaS; alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=GWF2_RBX1_38_17_curated
Alanine--tRNA ligase id=2068596 bin=GWE2_RBX1_39_32 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
alaS; alanyl-tRNA synthetase
GWD2_RBX1_39_127_gwd2_scaffold_207_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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4149..4562
DNA (414bp) protein (138aa)
Putative Holliday junction resolvase id=2068598 bin=GWE2_RBX1_39_32 species=Desulfosporosinus acidiphilus genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RNAse H-fold protein YqgF Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_207_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

4638..5927
DNA (1290bp) protein (430aa)
Predicted periplasmic solute-binding protein id=1853750 bin=GWD2_RBX1-related_39_127 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
periplasmic solute-binding protein; K07082 UPF0755 protein Tax=GWF2_RBX1_38_17_curated
periplasmic solute-binding protein
GWD2_RBX1_39_127_gwd2_scaffold_207_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(6052..7587)
DNA (1536bp) protein (512aa)
guaA; GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=GWF2_RBX1_38_17_curated
GMP synthase [glutamine-hydrolyzing] id=1853751 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
guaA; GMP synthase
GWD2_RBX1_39_127_gwd2_scaffold_207_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(7653..9143)
DNA (1491bp) protein (497aa)
IMP dehydrogenase/GMP reductase; K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=GWF2_RBX1_38_17_curated
Inosine-5'-monophosphate dehydrogenase id=2068605 bin=GWE2_RBX1_39_32 species=Desulfosporosinus sp. OT genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
IMP dehydrogenase/GMP reductase
GWD2_RBX1_39_127_gwd2_scaffold_207_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(9280..10578)
DNA (1299bp) protein (433aa)
adenylosuccinate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] Tax=GWF2_RBX1_38_17_curated
Adenylosuccinate lyase id=2068606 bin=GWE2_RBX1_39_32 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
adenylosuccinate lyase
GWD2_RBX1_39_127_gwd2_scaffold_207_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(10855..11394)
DNA (540bp) protein (180aa)
Putative uncharacterized protein id=2068607 bin=GWE2_RBX1_39_32 species=Heliobacterium modesticaldum genus=Heliobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein; K09139 hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_207_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

11545..12432
DNA (888bp) protein (296aa)
methionine aminopeptidase (EC:3.4.11.18) Tax=GWF2_RBX1_38_17_curated
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase id=2068627 bin=GWE2_RBX1_39_32 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_207_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(12466..13242)
DNA (777bp) protein (259aa)
Methyltransferase type 11 id=2068633 bin=GWE2_RBX1_39_32 species=Alkaliphilus oremlandii genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
methyltransferase type 11 Tax=GWF2_RBX1_38_17_curated
methyltransferase type 11
GWD2_RBX1_39_127_gwd2_scaffold_207_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(13245..13946)
DNA (702bp) protein (234aa)
DeoR-type transcriptional regulator id=24609429 bin=RAAC11 species=Zobellia galactanivorans genus=Zobellia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=RAAC11 organism_group=Unknown_CP
DeoR-type transcriptional regulator Tax=GWF2_RBX1_38_17_curated
DeoR-type transcriptional regulator
GWD2_RBX1_39_127_gwd2_scaffold_207_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(14028..14972)
DNA (945bp) protein (315aa)
Beta-lactamase id=2068641 bin=GWE2_RBX1_39_32 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
beta-lactamase Tax=GWF2_RBX1_38_17_curated
beta-lactamase
GWD2_RBX1_39_127_gwd2_scaffold_207_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(15021..15452)
DNA (432bp) protein (144aa)
Uncharacterized protein yqeY id=2068645 bin=GWE2_RBX1_39_32 species=Parachlamydia acanthamoebae genus=Parachlamydia taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
yqeY; hypothetical protein; K09117 hypothetical protein Tax=GWF2_RBX1_38_17_curated
yqeY; hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_207_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(15634..16443)
DNA (810bp) protein (270aa)
metallophosphoesterase; K07098 Tax=GWF2_RBX1_38_17_curated
metallophosphoesterase; K07098 id=24609426 bin=RAAC11 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
metallophosphoesterase
GWD2_RBX1_39_127_gwd2_scaffold_207_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(16570..17469)
DNA (900bp) protein (300aa)
glycosyl transferase family protein (EC:2.4.-.-) Tax=GWF2_RBX1_38_17_curated
glycosyl transferase family protein (EC:2.4.-.-)
Glycosyltransferase, group 2 family protein id=1853807 bin=GWD2_RBX1-related_39_127 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_207_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(17482..18129)
DNA (648bp) protein (216aa)
thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9] Tax=GWF2_RBX1_38_17_curated
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase id=1853808 bin=GWD2_RBX1-related_39_127 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_207_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(18141..19676)
DNA (1536bp) protein (512aa)
Single-stranded nucleic acid binding R3H id=1853809 bin=GWD2_RBX1-related_39_127 species=unknown genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
single-stranded nucleic acid binding R3H Tax=GWF2_RBX1_38_17_curated
single-stranded nucleic acid binding R3H
GWD2_RBX1_39_127_gwd2_scaffold_207_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(19764..20045)
DNA (282bp) protein (94aa)
Bacterial nucleoid DNA-binding protein id=2068665 bin=GWE2_RBX1_39_32 species=Ruminococcus sp. SR1/5 genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Bacterial nucleoid DNA-binding protein Tax=GWF2_RBX1_38_17_curated
Bacterial nucleoid DNA-binding protein
GWD2_RBX1_39_127_gwd2_scaffold_207_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(20082..21008)
DNA (927bp) protein (309aa)
thiamine pyrophosphate domain-containing TPP-binding protein; K00170 pyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.1] Tax=GWF2_RBX1_38_17_curated
Thiamine pyrophosphate protein domain protein TPP-binding protein id=2854577 bin=GWF2_OP9-related_38_17 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
thiamine pyrophosphate domain-containing TPP-binding protein
GWD2_RBX1_39_127_gwd2_scaffold_207_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(21024..22202)
DNA (1179bp) protein (393aa)
pyruvate ferredoxin oxidoreductase subunit alpha (EC:1.2.7.1); K00169 pyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.1] Tax=GWF2_RBX1_38_17_curated
pyruvate ferredoxin oxidoreductase subunit alpha (EC:1.2.7.1)
Pyruvate ferredoxin oxidoreductase, alpha subunit id=2068673 bin=GWE2_RBX1_39_32 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_207_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(22226..22519)
DNA (294bp) protein (98aa)
pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit; K00171 pyruvate ferredoxin oxidoreductase, delta subunit [EC:1.2.7.1] Tax=GWF2_RBX1_38_17_curated
Pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit id=2068677 bin=GWE2_RBX1_39_32 species=Thermovibrio ammonificans genus=Thermovibrio taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit
GWD2_RBX1_39_127_gwd2_scaffold_207_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(22519..23091)
DNA (573bp) protein (191aa)
pyruvate ferredoxin oxidoreductase subunit gamma (EC:1.2.7.1); K00172 pyruvate ferredoxin oxidoreductase, gamma subunit [EC:1.2.7.1] Tax=GWF2_RBX1_38_17_curated
pyruvate ferredoxin oxidoreductase subunit gamma (EC:1.2.7.1)
Pyruvate ferredoxin oxidoreductase, gamma subunit id=2068681 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_207_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(23104..23706)
DNA (603bp) protein (201aa)
Recombination protein RecR id=1853815 bin=GWD2_RBX1-related_39_127 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
recombination protein RecR; K06187 recombination protein RecR Tax=GWF2_RBX1_38_17_curated
recombination protein RecR
GWD2_RBX1_39_127_gwd2_scaffold_207_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(23720..24013)
DNA (294bp) protein (98aa)
Nucleoid-associated protein HMPREF1023_01057 id=2068690 bin=GWE2_RBX1_39_32 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein; K09747 hypothetical protein Tax=GWF2_RBX1_38_17_curated
YbaB/EbfC family DNA-binding protein
GWD2_RBX1_39_127_gwd2_scaffold_207_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(24280..26028)
DNA (1749bp) protein (583aa)
DNA polymerase III, subunits gamma and tau id=2068693 bin=GWE2_RBX1_39_32 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
DNA polymerase III, subunit gamma/tau Tax=GWF2_RBX1_38_17_curated
DNA polymerase III, subunit gamma/tau
GWD2_RBX1_39_127_gwd2_scaffold_207_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(26040..27107)
DNA (1068bp) protein (356aa)
alr; Alanine racemase (EC:5.1.1.1) id=24609414 bin=RAAC11 species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
alr; Alanine racemase (EC:5.1.1.1) Tax=GWF2_RBX1_38_17_curated
alanine racemase (EC:5.1.1.1)
GWD2_RBX1_39_127_gwd2_scaffold_207_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

27496..27759
DNA (264bp) protein (88aa)
id=2068697 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2068697 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_207_30
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(27784..28476)
DNA (693bp) protein (231aa)
Polysaccharide deacetylase family protein id=2068698 bin=GWE2_RBX1_39_32 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
polysaccharide deacetylase Tax=GWF2_RBX1_38_17_curated
polysaccharide deacetylase
Displaying items 1-30 of 50 in total

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