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GWD2_RBX1_39_127_gwd2_scaffold_521

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_521_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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236..1285
DNA (1050bp) protein (350aa)
id=24609199 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24609199 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_521_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(1437..1712)
DNA (276bp) protein (92aa)
id=24609200 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24609200 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_521_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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2123..3247
DNA (1125bp) protein (375aa)
putative RNA methylase; K07444 putative N6-adenine-specific DNA methylase [EC:2.1.1.-] id=24609201 bin=RAAC11 species=Fusobacterium ulcerans genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=RAAC11 organism_group=Unknown_CP
putative RNA methylase; K07444 putative N6-adenine-specific DNA methylase [EC:2.1.1.-] Tax=GWF2_RBX1_38_17_curated
putative RNA methylase
GWD2_RBX1_39_127_gwd2_scaffold_521_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(3328..3804)
DNA (477bp) protein (159aa)
id=2153684 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2153684 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_521_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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4102..4815
DNA (714bp) protein (238aa)
CAAX amino terminal protease family protein id=2027247 bin=GWD2_RBX1-related_39_127 species=Myxococcus fulvus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
CAAX amino terminal protease family protein Tax=GWF2_RBX1_38_17_curated
CAAX amino terminal protease family protein
GWD2_RBX1_39_127_gwd2_scaffold_521_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(4837..5706)
DNA (870bp) protein (290aa)
Ribonuclease BN id=2027248 bin=GWD2_RBX1-related_39_127 species=unknown genus=Lyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
ribonuclease BN Tax=GWF2_RBX1_38_17_curated
ribonuclease BN
GWD2_RBX1_39_127_gwd2_scaffold_521_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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6084..7781
DNA (1698bp) protein (566aa)
Digeranylgeranylglycerophospholipid reductase id=2027249 bin=GWD2_RBX1-related_39_127 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
geranylgeranyl reductase family protein Tax=GWF2_RBX1_38_17_curated
geranylgeranyl reductase
GWD2_RBX1_39_127_gwd2_scaffold_521_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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7864..8988
DNA (1125bp) protein (375aa)
Hydrogenase formation HypD protein id=2027250 bin=GWD2_RBX1-related_39_127 species=Neptuniibacter caesariensis genus=Neptuniibacter taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypD_[H]; [NiFe] hydrogenase metallocenter assembly protein HypD Tax=GWF2_RBX1_38_17_curated
hypD; hydrogenase expression/formation protein HypD
GWD2_RBX1_39_127_gwd2_scaffold_521_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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8985..10682
DNA (1698bp) protein (566aa)
hoxX; hydrogenase maturation factor hoxX (EC:2.1.2.9); K00936 [EC:2.7.3.-] id=24609207 bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
hoxX; hydrogenase maturation factor hoxX (EC:2.1.2.9); K00936 [EC:2.7.3.-] Tax=GWF2_RBX1_38_17_curated
hoxX; hydrogenase maturation factor hoxX (EC:2.1.2.9)
GWD2_RBX1_39_127_gwd2_scaffold_521_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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10750..11256
DNA (507bp) protein (169aa)
Putative adenylate/guanylate cyclase id=2153668 bin=GWE2_RBX1_39_32 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
putative PAS/PAC sensor protein Tax=GWF2_RBX1_38_17_curated
putative PAS/PAC sensor protein
GWD2_RBX1_39_127_gwd2_scaffold_521_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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11328..12212
DNA (885bp) protein (295aa)
Putative uncharacterized protein id=2027253 bin=GWD2_RBX1-related_39_127 species=Methanosarcina acetivorans genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_521_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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12392..14578
DNA (2187bp) protein (729aa)
recQ; ATP-dependent DNA helicase RecQ (EC:3.6.1.-); K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12] Tax=GWF2_RBX1_38_17_curated
recQ; ATP-dependent DNA helicase RecQ (EC:3.6.1.-)
ATP-dependent DNA helicase RecQ id=2153664 bin=GWE2_RBX1_39_32 species=Clostridium perfringens genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_521_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(14601..15404)
DNA (804bp) protein (268aa)
Toxin A id=2153635 bin=GWE2_RBX1_39_32 species=Brachyspira pilosicoli genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_521_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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15685..16881
DNA (1197bp) protein (399aa)
Major facilitator superfamily transporter id=2027256 bin=GWD2_RBX1-related_39_127 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
major facilitator superfamily transporter Tax=GWF2_RBX1_38_17_curated
major facilitator superfamily transporter
GWD2_RBX1_39_127_gwd2_scaffold_521_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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16895..17776
DNA (882bp) protein (294aa)
Leucine-rich repeat protein id=2153629 bin=GWE2_RBX1_39_32 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
leucine-rich repeat protein Tax=GWF2_RBX1_38_17_curated
leucine-rich repeat protein
GWD2_RBX1_39_127_gwd2_scaffold_521_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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18048..19247
DNA (1200bp) protein (400aa)
DEAD/DEAH box helicase domain protein id=2027258 bin=GWD2_RBX1-related_39_127 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
ATP-dependent RNA helicase RhlE Tax=GWF2_RBX1_38_17_curated
rhlE-2; ATP-dependent RNA helicase RhlE
GWD2_RBX1_39_127_gwd2_scaffold_521_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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19520..20884
DNA (1365bp) protein (455aa)
putative maltodextrin glucosidase id=2027259 bin=GWD2_RBX1-related_39_127 species=Clostridium arbusti genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
glycosidase Tax=GWF2_RBX1_38_17_curated
glycosidase
GWD2_RBX1_39_127_gwd2_scaffold_521_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(20914..21228)
DNA (315bp) protein (105aa)
Signal peptidase id=2027289 bin=GWD2_RBX1-related_39_127 species=Methanobacterium formicicum genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_521_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(21265..21966)
DNA (702bp) protein (234aa)
Glutamine amidotransferases class-II id=2027290 bin=GWD2_RBX1-related_39_127 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
glutamine amidotransferases class-II; K07008 glutamine amidotransferase Tax=GWF2_RBX1_38_17_curated
glutamine amidotransferases class-II
GWD2_RBX1_39_127_gwd2_scaffold_521_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(21970..22500)
DNA (531bp) protein (177aa)
Spore maturation protein B id=2027291 bin=GWD2_RBX1-related_39_127 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
spore maturation protein B; K06374 spore maturation protein B Tax=GWF2_RBX1_38_17_curated
spore maturation protein B
GWD2_RBX1_39_127_gwd2_scaffold_521_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(22497..23072)
DNA (576bp) protein (192aa)
Spore maturation protein A id=2153608 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein; K06373 spore maturation protein A Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_521_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(23069..23935)
DNA (867bp) protein (289aa)
peptidase U61 LD-carboxypeptidase A; K01297 muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] Tax=GWF2_RBX1_38_17_curated
Peptidase U61 LD-carboxypeptidase A id=2153606 bin=GWE2_RBX1_39_32 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
peptidase U61 LD-carboxypeptidase A
GWD2_RBX1_39_127_gwd2_scaffold_521_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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24206..26002
DNA (1797bp) protein (599aa)
amiA; N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28) Tax=GWF2_RBX1_38_17_curated
amiA; N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase id=2027297 bin=GWD2_RBX1-related_39_127 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_521_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(26019..26393)
DNA (375bp) protein (125aa)
Two component transcriptional regulator, winged helix family id=2027299 bin=GWD2_RBX1-related_39_127 species=Afipia sp. 1NLS2 genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
two component transcriptional regulator, winged helix family; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR Tax=GWF2_RBX1_38_17_curated
winged helix family two component transcriptional regulator
GWD2_RBX1_39_127_gwd2_scaffold_521_25
CG_Elusi_05, Elusimicrobia, Bacteria

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27043..28848
DNA (1806bp) protein (602aa)
HRDC domain-containing protein id=2027301 bin=GWD2_RBX1-related_39_127 species=Desulfovibrio sp. U5L genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein Tax=CG_Elusi_05
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_521_26
R_Deltaproteobacteria_44_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(29147..29446)
DNA (300bp) protein (100aa)
Putative transcriptional regulator, XRE family id=2027303 bin=GWD2_RBX1-related_39_127 species=Candidatus Glomeribacter gigasporarum genus=Candidatus Glomeribacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
XRE family transcriptional regulator Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_16_curated
XRE family transcriptional regulator
GWD2_RBX1_39_127_gwd2_scaffold_521_27
Legionella fallonii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(29424..29777)
DNA (354bp) protein (118aa)
Uncharacterized protein id=2027305 bin=GWD2_RBX1-related_39_127 species=Legionella pneumophila genus=Legionella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
putative Toxin-antitoxin system, toxin component, RelE family
Putative Toxin-antitoxin system, toxin component, RelE family {ECO:0000313|EMBL:CEG59243.1}; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legion
Displaying 27 items

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