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GWD2_RBX1_39_127_gwd2_scaffold_445

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_445_1
R_OD1_Uhrbacteria_57_19, Uhrbacteria, Parcubacteria, Bacteria

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3..605
DNA (603bp) protein (201aa)
UDP-glucose 4-epimerase id=1992679 bin=GWD2_RBX1-related_39_127 species=Leptospira inadai genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
nucleoside-diphosphate-sugar epimerase Tax=RIFCSPHIGHO2_02_FULL_OD1_Uhrbacteria_57_19_curated
UDP-glucose 4-epimerase
GWD2_RBX1_39_127_gwd2_scaffold_445_2
unknown

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640..1992
DNA (1353bp) protein (451aa)
id=1992680 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=1992680 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_445_3
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2052..3305
DNA (1254bp) protein (418aa)
rfbD; UDP-galactopyranose mutase RfbD (EC:5.4.99.9) id=24609586 bin=RAAC11 species=Halorubrum coriense genus=Halorubrum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=RAAC11 organism_group=Unknown_CP
rfbD; UDP-galactopyranose mutase RfbD (EC:5.4.99.9)
Amine oxidase {ECO:0000313|EMBL:ELZ46944.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;"
GWD2_RBX1_39_127_gwd2_scaffold_445_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(3337..5262)
DNA (1926bp) protein (642aa)
hypothetical protein id=24609587 bin=RAAC11 species=Clostridium saccharobutylicum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_445_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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6092..7681
DNA (1590bp) protein (530aa)
Peptidase S53 propeptide id=24609588 bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RAAC11 organism_group=Unknown_CP
id=1838234 Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_445_6
unknown

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7872..8966
DNA (1095bp) protein (365aa)
id=24609589 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24609589 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
GWD2_RBX1_39_127_gwd2_scaffold_445_7

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9017..9754
DNA (738bp) protein (246aa)
methyltransferase, FkbM subfamily protein id=24609590 bin=RAAC11 species=Bacillus cereus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
FkbM family methyltransferase protein {ECO:0000313|EMBL:KFM20080.1}; TaxID=1502295 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeot
methyltransferase, FkbM family
GWD2_RBX1_39_127_gwd2_scaffold_445_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(10298..11329)
DNA (1032bp) protein (344aa)
Fic family protein id=24609591 bin=RAAC11 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=RAAC11 organism_group=Unknown_CP
Fic family protein Tax=GWF2_RBX1_38_17_curated
Fic family protein
GWD2_RBX1_39_127_gwd2_scaffold_445_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(11620..13482)
DNA (1863bp) protein (621aa)
hypothetical protein id=24609592 bin=RAAC11 species=Nitrospina sp. AB-629-B06 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=RAAC11 organism_group=Unknown_CP
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_445_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(13519..14127)
DNA (609bp) protein (203aa)
id=1764447 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1764447 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_445_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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14385..16166
DNA (1782bp) protein (594aa)
sensor protein; K07652 two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] Tax=GWF2_RBX1_38_17_curated
sensor protein yycG id=1992716 bin=GWD2_RBX1-related_39_127 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
sensor protein
GWD2_RBX1_39_127_gwd2_scaffold_445_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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16166..17473
DNA (1308bp) protein (436aa)
two-component hybrid sensor and regulator id=24609595 bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=RAAC11 organism_group=Unknown_CP
two-component hybrid sensor and regulator Tax=GWF2_RBX1_38_17_curated
two-component hybrid sensor and regulator
GWD2_RBX1_39_127_gwd2_scaffold_445_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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17457..17900
DNA (444bp) protein (148aa)
one-component system sensor protein (EC:2.7.13.3) Tax=GWF2_RBX1_38_17_curated
one-component system sensor protein (EC:2.7.13.3)
One-component system sensor protein id=1764496 bin=GWE2_RBX1_39_32 species=Zobellia galactanivorans genus=Zobellia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_445_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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17970..20291
DNA (2322bp) protein (774aa)
Tetratricopeptide TPR_1 repeat-containing protein id=1992721 bin=GWD2_RBX1-related_39_127 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
O-linked N-acetylglucosamine transferase, SPINDLY family Tax=GWF2_RBX1_38_17_curated
O-linked N-acetylglucosamine transferase, SPINDLY family
GWD2_RBX1_39_127_gwd2_scaffold_445_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(20297..20695)
DNA (399bp) protein (133aa)
N-terminal methylation motif domain protein id=1764498 bin=GWE2_RBX1_39_32 species=Dictyoglomus turgidum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
N-terminal methylation motif domain-containing protein Tax=GWF2_RBX1_38_17_curated
N-terminal methylation motif domain-containing protein
GWD2_RBX1_39_127_gwd2_scaffold_445_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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20896..21639
DNA (744bp) protein (248aa)
NCAIR mutase (PurE)-like protein id=1764499 bin=GWE2_RBX1_39_32 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; K06898 Tax=GWF2_RBX1_38_17_curated
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
GWD2_RBX1_39_127_gwd2_scaffold_445_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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21774..22943
DNA (1170bp) protein (390aa)
TIGR00299 family protein id=24609600 bin=RAAC11 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=RAAC11 organism_group=Unknown_CP
TIGR00299 family protein Tax=GWF2_RBX1_38_17_curated
UPF0272 protein
GWD2_RBX1_39_127_gwd2_scaffold_445_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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22933..23793
DNA (861bp) protein (287aa)
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase; K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] id=24609601 bin=RAAC11 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=RAAC11 organism_group=Unknown_CP
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase; K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrol
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase
GWD2_RBX1_39_127_gwd2_scaffold_445_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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23880..25031
DNA (1152bp) protein (384aa)
aroC; chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] Tax=GWF2_RBX1_38_17_curated
aroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase id=1764502 bin=GWE2_RBX1_39_32 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_445_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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25098..25388
DNA (291bp) protein (97aa)
30S ribosomal protein S16 id=1764503 bin=GWE2_RBX1_39_32 species=unknown genus=Leuconostoc taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
SSU ribosomal protein S16P; K02959 small subunit ribosomal protein S16 Tax=GWF2_RBX1_38_17_curated
30S ribosomal protein S16
GWD2_RBX1_39_127_gwd2_scaffold_445_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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25442..25675
DNA (234bp) protein (78aa)
UPF0109 protein CcarbDRAFT_1215 id=1764504 bin=GWE2_RBX1_39_32 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein; K06960 Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_445_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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25691..26137
DNA (447bp) protein (149aa)
Putative uncharacterized protein id=1764505 bin=GWE2_RBX1_39_32 species=Stanieria cyanosphaera genus=Stanieria taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_445_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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26121..26639
DNA (519bp) protein (173aa)
Ribosome maturation factor RimM id=1764506 bin=GWE2_RBX1_39_32 species=[Clostridium] stercorarium genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM Tax=GWF2_RBX1_38_17_curated
16S rRNA processing protein RimM
GWD2_RBX1_39_127_gwd2_scaffold_445_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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26681..27403
DNA (723bp) protein (241aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase; K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=GWF2_RBX1_38_17_curated
tRNA (guanine-N(1)-)-methyltransferase id=1992743 bin=GWD2_RBX1-related_39_127 species=Staphylococcus saprophyticus genus=Staphylococcus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
tRNA (Guanine37-N1) -methyltransferase
GWD2_RBX1_39_127_gwd2_scaffold_445_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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27422..27781
DNA (360bp) protein (120aa)
50S ribosomal protein L19 id=1992746 bin=GWD2_RBX1-related_39_127 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
ribosomal protein L19, bacterial type Tax=GWF2_RBX1_38_17_curated
ribosomal protein L19, bacterial type
GWD2_RBX1_39_127_gwd2_scaffold_445_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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27781..28527
DNA (747bp) protein (249aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I id=1992749 bin=GWD2_RBX1-related_39_127 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
signal peptidase I Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_445_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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28705..30084
DNA (1380bp) protein (460aa)
Type III restriction enzyme, res subunit id=1992752 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
transglycosylase Tax=GWF2_RBX1_38_17_curated
Displaying 27 items

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