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GWD2_RBX1_39_127_gwd2_scaffold_116

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Displaying items 31-60 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_116_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(31484..31729)
DNA (246bp) protein (82aa)
Uncharacterized protein Tax=GWF2_RBX1_38_17_curated
Uncharacterized protein id=1973800 bin=GWE2_RBX1_39_32 species=unknown genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_116_30
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(31826..32170)
DNA (345bp) protein (115aa)
Uncharacterized protein id=1973798 bin=GWE2_RBX1_39_32 species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein; K09005 hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_116_31
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(32227..33099)
DNA (873bp) protein (291aa)
HemK family modification methylase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=GWF2_RBX1_38_17_curated
Release factor glutamine methyltransferase id=1973796 bin=GWE2_RBX1_39_32 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
HemK family modification methylase
GWD2_RBX1_39_127_gwd2_scaffold_116_32
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(33142..34206)
DNA (1065bp) protein (355aa)
Peptide chain release factor 1 id=1756413 bin=GWD2_RBX1-related_39_127 species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
bacterial peptide chain release factor 1 (brf-1); K02835 peptide chain release factor 1 Tax=GWF2_RBX1_38_17_curated
peptide chain release factor 1
GWD2_RBX1_39_127_gwd2_scaffold_116_33
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(34452..35315)
DNA (864bp) protein (288aa)
Uncharacterized protein id=4153504 bin=GWF2_OP9-related_38_17 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_116_34
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(35318..36007)
DNA (690bp) protein (230aa)
thymidylate synthase thyX; K03465 thymidylate synthase (FAD) [EC:2.1.1.148] Tax=GWF2_RBX1_38_17_curated
Thymidylate synthase ThyX id=1973790 bin=GWE2_RBX1_39_32 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
thymidylate synthase thyX
GWD2_RBX1_39_127_gwd2_scaffold_116_35
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists


comp(36019..36222)
DNA (204bp) protein (68aa)
50S ribosomal protein L31 id=1973788 bin=GWE2_RBX1_39_32 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 Tax=GWF2_RBX1_38_17_curated
rpmE; 50S ribosomal protein L31
GWD2_RBX1_39_127_gwd2_scaffold_116_36
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(36351..37937)
DNA (1587bp) protein (529aa)
rho; transcription termination factor; K03628 transcription termination factor Rho Tax=GWF2_RBX1_38_17_curated
rho; transcription termination factor; K03628 transcription termination factor Rho id=24610807 bin=RAAC11 species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
rho; transcription termination factor
GWD2_RBX1_39_127_gwd2_scaffold_116_trna_3
unknown

Not on your lists

comp(37998..38081)
DNA (84bp)
transferRNA
GWD2_RBX1_39_127_gwd2_scaffold_116_trna_2
unknown

Not on your lists

comp(38097..38181)
DNA (85bp)
transferRNA
GWD2_RBX1_39_127_gwd2_scaffold_116_37
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(38251..38670)
DNA (420bp) protein (140aa)
thioesterase superfamily protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] Tax=GWF2_RBX1_38_17_curated
Thioesterase superfamily protein id=1973784 bin=GWE2_RBX1_39_32 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
thioesterase superfamily protein
GWD2_RBX1_39_127_gwd2_scaffold_116_38
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(38731..39729)
DNA (999bp) protein (333aa)
RNA polymerase sigma factor id=1973782 bin=GWE2_RBX1_39_32 species=unknown genus=Lactobacillus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=GWF2_RBX1_38_17_curated
RNA polymerase sigma factor
GWD2_RBX1_39_127_gwd2_scaffold_116_39
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(39744..39854)
DNA (111bp) protein (37aa)
id=24610804 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24610804 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_116_40
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(40166..41491)
DNA (1326bp) protein (442aa)
Membrane protein involved in aromatic hydrocarbon degradation id=1973780 bin=GWE2_RBX1_39_32 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
membrane protein involved in aromatic hydrocarbon degradation; K06076 long-chain fatty acid transport protein Tax=GWF2_RBX1_38_17_curated
membrane protein involved in aromatic hydrocarbon degradation
GWD2_RBX1_39_127_gwd2_scaffold_116_41
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(41439..42308)
DNA (870bp) protein (290aa)
peptidase M48 Ste24p id=24610802 bin=RAAC11 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=RAAC11 organism_group=Unknown_CP
peptidase M48 Ste24p Tax=GWF2_RBX1_38_17_curated
peptidase M48 Ste24p
GWD2_RBX1_39_127_gwd2_scaffold_116_42
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(42320..42847)
DNA (528bp) protein (176aa)
id=1973776 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1973776 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_116_43
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(42906..45044)
DNA (2139bp) protein (713aa)
CHASE2 domain-containing protein; K01768 adenylate cyclase [EC:4.6.1.1] Tax=GWF2_RBX1_38_17_curated
CHASE2 domain protein id=1973774 bin=GWE2_RBX1_39_32 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
CHASE2 domain-containing protein
GWD2_RBX1_39_127_gwd2_scaffold_116_44
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(45170..45562)
DNA (393bp) protein (131aa)
id=1973773 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1973773 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_116_45
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(45575..46030)
DNA (456bp) protein (152aa)
Putative transcriptional regulator, Crp/Fnr family id=1973771 bin=GWE2_RBX1_39_32 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
cAMP-binding protein Tax=GWF2_RBX1_38_17_curated
cAMP-binding protein
GWD2_RBX1_39_127_gwd2_scaffold_116_46
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(46125..47297)
DNA (1173bp) protein (391aa)
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases id=1756462 bin=GWD2_RBX1-related_39_127 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Tax=GWF2_RBX1_38_17_curated
ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
GWD2_RBX1_39_127_gwd2_scaffold_116_47
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(47285..49036)
DNA (1752bp) protein (584aa)
aldehyde:ferredoxin oxidoreductase; K03738 aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] Tax=GWF2_RBX1_38_17_curated
Aldehyde:ferredoxin oxidoreductase id=1756464 bin=GWD2_RBX1-related_39_127 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
aldehyde:ferredoxin oxidoreductase
GWD2_RBX1_39_127_gwd2_scaffold_116_48
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(49165..50403)
DNA (1239bp) protein (413aa)
class I and II aminotransferase; K10206 LL-diaminopimelate aminotransferase [EC:2.6.1.83] id=24610795 bin=RAAC11 species=Desulfovibrio fructosivorans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
class I and II aminotransferase; K10206 LL-diaminopimelate aminotransferase [EC:2.6.1.83] Tax=GWF2_RBX1_38_17_curated
class I and II aminotransferase
GWD2_RBX1_39_127_gwd2_scaffold_116_49
GWF1_Spirochaetes_49_6_curated, Spirochaetes, Bacteria

Not on your lists

50540..52105
DNA (1566bp) protein (522aa)
ISPsy6, transposase id=1973763 bin=GWE2_RBX1_39_32 species=unknown genus=Dehalobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Transposase, IS4 family Tax=GWF1_Spirochaetes_49_6_curated
ISPsy6, transposase
GWD2_RBX1_39_127_gwd2_scaffold_116_50
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(52252..55203)
DNA (2952bp) protein (984aa)
alpha-glucan phosphorylase (EC:2.4.1.1); K00688 starch phosphorylase [EC:2.4.1.1] Tax=GWF2_RBX1_38_17_curated
alpha-glucan phosphorylase (EC:2.4.1.1)
Alpha-glucan phosphorylase id=1973761 bin=GWE2_RBX1_39_32 species=Thermococcus litoralis genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_116_51
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

55783..57204
DNA (1422bp) protein (474aa)
hypothetical protein; K09749 hypothetical protein id=24610793 bin=RAAC11 species=Natranaerobius thermophilus genus=Natranaerobius taxon_order=Natranaerobiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
hypothetical protein; K09749 hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_116_52
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

57375..57563
DNA (189bp) protein (63aa)
id=1973714 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1973714 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_116_53
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(57553..59880)
DNA (2328bp) protein (776aa)
DNA internalization-related competence protein ComEC/Rec2 id=1973712 bin=GWE2_RBX1_39_32 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
DNA internalization-related competence protein ComEC/Rec2 Tax=GWF2_RBX1_38_17_curated
DNA internalization-related competence protein ComEC/Rec2
GWD2_RBX1_39_127_gwd2_scaffold_116_54
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(59996..60295)
DNA (300bp) protein (100aa)
id=24610790 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24610790 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_116_55
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(60372..61082)
DNA (711bp) protein (237aa)
purQ; phosphoribosylformylglycinamidine synthase large subunit (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=GWF2_RBX1_38_17_curated
purQ; phosphoribosylformylglycinamidine synthase large subunit (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 1 id=1756472 bin=GWD2_RBX1-related_39_127 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_116_56
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(61138..61392)
DNA (255bp) protein (85aa)
phosphoribosylformylglycinamidine synthase subunit PurS; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=GWF2_RBX1_38_17_curated
Phosphoribosylformylglycinamidine synthase subunit PurS id=1973708 bin=GWE2_RBX1_39_32 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
phosphoribosylformylglycinamidine synthase subunit PurS
Displaying items 31-60 of 71 in total

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