ggKbase home page

GWD2_RBX1_39_127_gwd2_scaffold_2034

Search features with annotation key words

Displaying 12 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_2034_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

174..731
DNA (558bp) protein (186aa)
Hypothetical transmembrane protein id=1851158 bin=GWD2_RBX1-related_39_127 species=Flavobacterium branchiophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_2034_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(745..3252)
DNA (2508bp) protein (836aa)
Putative uncharacterized protein id=2087054 bin=GWE2_RBX1_39_32 species=unknown genus=Halanaerobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_2034_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(3311..5140)
DNA (1830bp) protein (610aa)
peptidase U32 family protein; K08303 putative protease [EC:3.4.-.-] Tax=GWF2_RBX1_38_17_curated
Peptidase U32 family protein id=1851162 bin=GWD2_RBX1-related_39_127 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
peptidase U32 family protein
GWD2_RBX1_39_127_gwd2_scaffold_2034_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

5461..6156
DNA (696bp) protein (232aa)
Putative uncharacterized protein id=1851164 bin=GWD2_RBX1-related_39_127 species=Methanosarcina barkeri genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_2034_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

6182..6457
DNA (276bp) protein (92aa)
id=24608247 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=2087049 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_2034_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(6494..6658)
DNA (165bp) protein (55aa)
id=1851167 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=2087047 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_2034_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(6690..7391)
DNA (702bp) protein (234aa)
Methyltransferase type 11 id=1851169 bin=GWD2_RBX1-related_39_127 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
type 11 methyltransferase Tax=GWF2_RBX1_38_17_curated
type 11 methyltransferase
GWD2_RBX1_39_127_gwd2_scaffold_2034_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

7581..8738
DNA (1158bp) protein (386aa)
id=1851171 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=4664337 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_2034_9

Not on your lists

comp(8990..9265)
DNA (276bp) protein (92aa)
Uncharacterized protein id=1851172 bin=GWD2_RBX1-related_39_127 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Uncharacterized protein {ECO:0000313|EMBL:CBI10819.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_2034_10

Not on your lists

comp(9262..9546)
DNA (285bp) protein (95aa)
Putative uncharacterized protein id=1851174 bin=GWD2_RBX1-related_39_127 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Uncharacterized protein {ECO:0000313|EMBL:KKT47291.1}; TaxID=1618929 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_17.;"
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_2034_11
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9795..9995
DNA (201bp) protein (67aa)
hypothetical protein id=24608241 bin=RAAC11 species=Rhodonellum psychrophilum genus=Rhodonellum taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RAAC11 organism_group=Unknown_CP
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
GWD2_RBX1_39_127_gwd2_scaffold_2034_12

Not on your lists

10131..10415
DNA (285bp) protein (95aa)
XRE family transcriptional regulator id=24608240 bin=RAAC11 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
Uncharacterized protein {ECO:0000313|EMBL:KKK62883.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
XRE family transcriptional regulator
Displaying 12 items

View Taxonomy