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GWD2_RBX1_39_127_gwd2_scaffold_649

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_649_trna_1
unknown

Not on your lists

comp(206..277)
DNA (72bp)
transferRNA
GWD2_RBX1_39_127_gwd2_scaffold_649_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(329..1330)
DNA (1002bp) protein (334aa)
fructose-bisphosphate aldolase (EC:4.1.2.13); K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13] Tax=GWF2_RBX1_38_17_curated
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase id=2078213 bin=GWD2_RBX1-related_39_127 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_649_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(1478..2233)
DNA (756bp) protein (252aa)
tpiA; triosephosphate isomerase; K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=GWF2_RBX1_38_17_curated
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase id=2078216 bin=GWD2_RBX1-related_39_127 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_649_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(2267..4285)
DNA (2019bp) protein (673aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=GWF2_RBX1_38_17_curated
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1)
Putative K(+)-stimulated pyrophosphate-energized sodium pump id=2078220 bin=GWD2_RBX1-related_39_127 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_649_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(4421..6076)
DNA (1656bp) protein (552aa)
UPI00020A9C1C related cluster id=3830741 bin=GWF2_OP9-related_38_17 species=Thermodesulfobium narugense genus=Thermodesulfobium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
60 kDa chaperonin; K04077 chaperonin GroEL Tax=GWF2_RBX1_38_17_curated
60 kDa chaperonin
GWD2_RBX1_39_127_gwd2_scaffold_649_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(6119..6400)
DNA (282bp) protein (94aa)
10 kDa chaperonin id=2095235 bin=GWE2_RBX1_39_32 species=Arthrobacter crystallopoietes genus=Arthrobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
molecular chaperone GroES; K04078 chaperonin GroES Tax=GWF2_RBX1_38_17_curated
molecular chaperone GroES
GWD2_RBX1_39_127_gwd2_scaffold_649_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(6891..7478)
DNA (588bp) protein (196aa)
id=2095238 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2095238 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_649_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(7584..8198)
DNA (615bp) protein (205aa)
Putative uncharacterized protein id=2095239 bin=GWE2_RBX1_39_32 species=Clostridium saccharolyticum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
radical SAM-linked protein Tax=GWF2_RBX1_38_17_curated
radical SAM-linked protein
GWD2_RBX1_39_127_gwd2_scaffold_649_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(8198..10009)
DNA (1812bp) protein (604aa)
Radical SAM domain-containing protein Tax=GWF2_RBX1_38_17_curated
Radical SAM domain protein id=2095242 bin=GWE2_RBX1_39_32 species=Clostridium sp. ASF356 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Radical SAM domain-containing protein
GWD2_RBX1_39_127_gwd2_scaffold_649_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(10013..11227)
DNA (1215bp) protein (405aa)
id=2095245 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2095245 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_649_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(11241..14405)
DNA (3165bp) protein (1055aa)
id=2078239 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=3830747 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_649_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

14827..15798
DNA (972bp) protein (324aa)
glucokinase (EC:2.7.1.2); K00845 glucokinase [EC:2.7.1.2] Tax=GWF2_RBX1_38_17_curated
glucokinase (EC:2.7.1.2)
Glucokinase id=2078240 bin=GWD2_RBX1-related_39_127 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_649_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

15841..16473
DNA (633bp) protein (211aa)
hisH; imidazole glycerol phosphate synthase subunit HisH; K02501 glutamine amidotransferase [EC:2.4.2.-] Tax=GWF2_RBX1_38_17_curated
Imidazole glycerol phosphate synthase subunit HisH id=2095250 bin=GWE2_RBX1_39_32 species=unknown genus=Sulfurihydrogenibium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hisH; imidazole glycerol phosphate synthase subunit HisH
GWD2_RBX1_39_127_gwd2_scaffold_649_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

16481..17278
DNA (798bp) protein (266aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16) Tax=GWF2_RBX1_38_17_curated
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase id=2078246 bin=GWD2_RBX1-related_39_127 species=Crinalium epipsammum genus=Crinalium taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_649_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(17305..18093)
DNA (789bp) protein (263aa)
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 id=2095254 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
UBA/THIF-type NAD/FAD binding protein Tax=GWF2_RBX1_38_17_curated
UBA/THIF-type NAD/FAD binding protein
GWD2_RBX1_39_127_gwd2_scaffold_649_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(18153..19382)
DNA (1230bp) protein (410aa)
O-acetylhomoserine aminocarboxypropyltransferase (EC:2.5.1.49); K01740 O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] Tax=GWF2_RBX1_38_17_curated
O-acetylhomoserine aminocarboxypropyltransferase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase id=2095278 bin=GWE2_RBX1_39_32 species=Methanosphaerula palustris genus=Methanosphaerula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_649_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

19733..20734
DNA (1002bp) protein (334aa)
4-hydroxythreonine-4-phosphate dehydrogenase id=3830820 bin=GWF2_OP9-related_38_17 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
4-hydroxythreonine-4-phosphate dehydrogenase Tax=GWF2_RBX1_38_17_curated
4-hydroxythreonine-4-phosphate dehydrogenase
GWD2_RBX1_39_127_gwd2_scaffold_649_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists


20741..21547
DNA (807bp) protein (269aa)
dimethyladenosine transferase (EC:2.1.1.48); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=GWF2_RBX1_38_17_curated
dimethyladenosine transferase (EC:2.1.1.48)
Ribosomal RNA small subunit methyltransferase A id=2095282 bin=GWE2_RBX1_39_32 species=Caloramator australicus genus=Caloramator taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_649_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(21595..22548)
DNA (954bp) protein (318aa)
id=3830825 bin=GWF2_OP9-related_38_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
id=3830825 Tax=GWF2_RBX1_38_17_curated
Displaying 19 items

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