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GWD2_RBX1_39_127_gwd2_scaffold_564

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_564_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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700..891
DNA (192bp) protein (64aa)
id=1768377 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1768377 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_564_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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918..1472
DNA (555bp) protein (185aa)
SEC-C motif family protein id=1768376 bin=GWE2_RBX1_39_32 species=Natronococcus jeotgali genus=Natronococcus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
SEC-C motif family protein Tax=GWF2_RBX1_38_17_curated
SEC-C motif family protein
GWD2_RBX1_39_127_gwd2_scaffold_564_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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1488..2510
DNA (1023bp) protein (341aa)
Uncharacterized protein yhcG id=4328288 bin=GWF2_OP9-related_38_17 species=Capnocytophaga canimorsus genus=Capnocytophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_564_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(2645..2920)
DNA (276bp) protein (92aa)
Integrase catalytic region Tax=GWF2_RBX1_38_17_curated
Transposase id=1940641 bin=GWD2_RBX1-related_39_127 species=Synechocystis sp. PCC 6803 genus=Synechocystis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Integrase catalytic region
GWD2_RBX1_39_127_gwd2_scaffold_564_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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3120..3287
DNA (168bp) protein (56aa)
id=1768373 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1768373 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_564_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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3287..3745
DNA (459bp) protein (153aa)
Filamentation induced by cAMP protein Fic id=2044887 bin=GWD2_RBX1-related_39_127 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
filamentation induced by cAMP protein fic Tax=GWF2_RBX1_38_17_curated
filamentation induced by cAMP protein fic
GWD2_RBX1_39_127_gwd2_scaffold_564_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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4214..5338
DNA (1125bp) protein (375aa)
Filamentation induced by cAMP protein fic id=1768369 bin=GWE2_RBX1_39_32 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Filamentation induced by cAMP protein fic Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_564_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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5579..6730
DNA (1152bp) protein (384aa)
Putative uncharacterized protein id=1768367 bin=GWE2_RBX1_39_32 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_564_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(6884..7924)
DNA (1041bp) protein (347aa)
hypothetical protein PelgB_29681 id=1768365 bin=GWE2_RBX1_39_32 species=Paenibacillus elgii genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_564_10
unknown

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comp(8083..8304)
DNA (222bp) protein (74aa)
id=24609841 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24609841 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
GWD2_RBX1_39_127_gwd2_scaffold_564_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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8390..10597
DNA (2208bp) protein (736aa)
UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=GWF2_RBX1_38_17_curated
UvrD/REP helicase id=1768363 bin=GWE2_RBX1_39_32 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
UvrD/REP helicase
GWD2_RBX1_39_127_gwd2_scaffold_564_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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10844..12274
DNA (1431bp) protein (477aa)
Kelch repeats protein id=1768361 bin=GWE2_RBX1_39_32 species=Zobellia galactanivorans genus=Zobellia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Kelch repeat-containing protein Tax=GWF2_RBX1_38_17_curated
Kelch repeat-containing protein
GWD2_RBX1_39_127_gwd2_scaffold_564_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

12296..13138
DNA (843bp) protein (281aa)
Membrane-fusion protein-like protein id=2044898 bin=GWD2_RBX1-related_39_127 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
membrane-fusion protein-like protein Tax=GWF2_RBX1_38_17_curated
membrane-fusion protein-like protein
GWD2_RBX1_39_127_gwd2_scaffold_564_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

13143..15044
DNA (1902bp) protein (634aa)
membrane-fusion protein-like protein id=24609845 bin=RAAC11 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=RAAC11 organism_group=Unknown_CP
membrane-fusion protein-like protein Tax=GWF2_RBX1_38_17_curated
membrane-fusion protein-like protein
GWD2_RBX1_39_127_gwd2_scaffold_564_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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15051..17207
DNA (2157bp) protein (719aa)
M50 family peptidase id=24609846 bin=RAAC11 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=RAAC11 organism_group=Unknown_CP
M50 family peptidase Tax=GWF2_RBX1_38_17_curated
M50 family peptidase
GWD2_RBX1_39_127_gwd2_scaffold_564_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

17159..19201
DNA (2043bp) protein (681aa)
Protein translocase subunit SecA 2 id=2044904 bin=GWD2_RBX1-related_39_127 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
secA; preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA Tax=GWF2_RBX1_38_17_curated
secA; preprotein translocase subunit SecA
GWD2_RBX1_39_127_gwd2_scaffold_564_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(19208..19597)
DNA (390bp) protein (130aa)
id=24609848 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24609848 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_564_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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19972..25674
DNA (5703bp) protein (1901aa)
hypothetical protein MkanA1_27276 id=2044907 bin=GWD2_RBX1-related_39_127 species=Magnetospirillum sp. SO-1 genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hemolysin-type calcium-binding region Tax=GWF2_RBX1_38_17_curated
PE_PGRS; Conserved protein of unknown function PE-PGRS family protein PE_PGRS24
Displaying 18 items

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