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GWD2_RBX1_39_127_gwd2_scaffold_737

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_737_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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160..1188
DNA (1029bp) protein (343aa)
3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54); K03856 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] Tax=GWF2_RBX1_38_17_curated
Phospho-2-dehydro-3-deoxyheptonate aldolase (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) id=2168624 bin=GWE2_RBX1_39_32 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
aroG-2; 3-deoxy-7-phosphoheptulonate synthase
GWD2_RBX1_39_127_gwd2_scaffold_737_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(1185..1715)
DNA (531bp) protein (177aa)
Putative uncharacterized protein id=2168623 bin=GWE2_RBX1_39_32 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Putative uncharacterized protein Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_737_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(1968..2147)
DNA (180bp) protein (60aa)
id=2168622 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2168622 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_737_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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2460..3854
DNA (1395bp) protein (465aa)
AMMECR1-domain protein id=2105510 bin=GWD2_RBX1-related_39_127 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
AMMECR1 domain-containing protein; K06990 Tax=GWF2_RBX1_38_17_curated
AMMECR1 domain-containing protein
GWD2_RBX1_39_127_gwd2_scaffold_737_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

3871..4296
DNA (426bp) protein (142aa)
Response regulator containing a CheY-like receiver domain and an HD-GYP domain (Fragment) id=2168620 bin=GWE2_RBX1_39_32 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
PAS/PAC sensor protein Tax=GWF2_RBX1_38_17_curated
PAS/PAC sensor protein
GWD2_RBX1_39_127_gwd2_scaffold_737_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(4291..5583)
DNA (1293bp) protein (431aa)
hisD; histidinol dehydrogenase HisD (EC:1.1.1.23) Tax=GWF2_RBX1_38_17_curated
hisD; histidinol dehydrogenase HisD (EC:1.1.1.23)
Histidinol dehydrogenase id=2105514 bin=GWD2_RBX1-related_39_127 species=Clostridium acidurici genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_737_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

5975..6586
DNA (612bp) protein (204aa)
id=2168618 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2168618 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_737_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(6643..7977)
DNA (1335bp) protein (445aa)
3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] Tax=GWF2_RBX1_38_17_curated
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase id=2168617 bin=GWE2_RBX1_39_32 species=Bacillus sp. 2_A_57_CT2 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_737_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(7974..8615)
DNA (642bp) protein (214aa)
ATP phosphoribosyltransferase (EC:2.4.2.17) Tax=GWF2_RBX1_38_17_curated
ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase id=2168616 bin=GWE2_RBX1_39_32 species=Pseudanabaena sp. PCC 7367 genus=Pseudanabaena taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_737_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(8615..9484)
DNA (870bp) protein (290aa)
ATP phosphoribosyltransferase regulatory subunit id=2105521 bin=GWD2_RBX1-related_39_127 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
HisS2; histidyl-tRNA synthetase; K02502 ATP phosphoribosyltransferase regulatory subunit Tax=GWF2_RBX1_38_17_curated
HisS2; histidyl-tRNA synthetase
GWD2_RBX1_39_127_gwd2_scaffold_737_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(9595..10737)
DNA (1143bp) protein (381aa)
Two component transcriptional regulator, winged helix family id=2105523 bin=GWD2_RBX1-related_39_127 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain Tax=GWF2_RBX1_38_17_curated
ArsR family transcriptional regulator
GWD2_RBX1_39_127_gwd2_scaffold_737_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(10823..11542)
DNA (720bp) protein (240aa)
Putative uncharacterized protein id=2168567 bin=GWE2_RBX1_39_32 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_737_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(11681..13015)
DNA (1335bp) protein (445aa)
id=2168566 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2168566 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_737_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(13089..17108)
DNA (4020bp) protein (1340aa)
Putative uncharacterized protein id=2168564 bin=GWE2_RBX1_39_32 species=Gloeocapsa sp. PCC 73106 genus=Gloeocapsa taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
FG-GAP repeat-containing protein Tax=GWF2_RBX1_38_17_curated
FG-GAP repeat-containing protein
GWD2_RBX1_39_127_gwd2_scaffold_737_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(17206..18906)
DNA (1701bp) protein (567aa)
Putative uncharacterized protein id=2168562 bin=GWE2_RBX1_39_32 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_737_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(18893..19357)
DNA (465bp) protein (155aa)
TadE family protein id=2168560 bin=GWE2_RBX1_39_32 species=Natranaerobius thermophilus genus=Natranaerobius taxon_order=Natranaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
TadE family protein Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_737_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(19728..20153)
DNA (426bp) protein (142aa)
TadE family protein id=2168559 bin=GWE2_RBX1_39_32 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
TadE family protein Tax=GWF2_RBX1_38_17_curated
TadE family protein
GWD2_RBX1_39_127_gwd2_scaffold_737_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(20259..20879)
DNA (621bp) protein (207aa)
Sua5/YciO/YrdC/YwlC family protein id=2105559 bin=GWD2_RBX1-related_39_127 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=GWF2_RBX1_38_17_curated
Sua5/YciO/YrdC/YwlC family protein
Displaying 18 items

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