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GWD2_RBX1_39_127_gwd2_scaffold_212

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Displaying items 1-30 of 42 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_212_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(134..1360)
DNA (1227bp) protein (409aa)
id=2009846 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2009846 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_212_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(1438..4983)
DNA (3546bp) protein (1182aa)
Uncharacterized protein id=2009848 bin=GWE2_RBX1_39_32 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWD2_RBX1_39_127_gwd2_scaffold_212_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(4998..5975)
DNA (978bp) protein (326aa)
id=2009852 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2009852 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_212_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(5993..6943)
DNA (951bp) protein (317aa)
id=2009854 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2009854 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_212_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(7048..8298)
DNA (1251bp) protein (417aa)
id=2009856 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2009856 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_212_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(8383..11325)
DNA (2943bp) protein (981aa)
Uncharacterized protein id=2009857 bin=GWE2_RBX1_39_32 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
cadherin Tax=GWF2_RBX1_38_17_curated
cadherin
GWD2_RBX1_39_127_gwd2_scaffold_212_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

11551..12414
DNA (864bp) protein (288aa)
pdaC; polysaccharide deacetylase (EC:3.5.1.-) Tax=GWF2_RBX1_38_17_curated
Polysaccharide deacetylase, PdaB family id=2711367 bin=GWF2_OP9-related_38_17 species=Anoxybacillus flavithermus genus=Anoxybacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
chitooligosaccharide deacetylase
GWD2_RBX1_39_127_gwd2_scaffold_212_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(12421..13551)
DNA (1131bp) protein (377aa)
DNA uptake Rossmann fold nucleotide-binding protein; K04096 DNA processing protein Tax=GWF2_RBX1_38_17_curated
DNA uptake Rossmann fold nucleotide-binding protein; K04096 DNA processing protein id=24610815 bin=RAAC11 species=Syntrophomonas wolfei genus=Syntrophomonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
DNA uptake Rossmann fold nucleotide-binding protein
GWD2_RBX1_39_127_gwd2_scaffold_212_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(13526..14695)
DNA (1170bp) protein (390aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267) Tax=GWF2_RBX1_38_17_curated
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase id=2009867 bin=GWE2_RBX1_39_32 species=Chroococcidiopsis thermalis genus=Chroococcidiopsis taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_212_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(14692..15507)
DNA (816bp) protein (272aa)
phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] Tax=GWF2_RBX1_38_17_curated
phosphatidate cytidylyltransferase id=2009870 bin=GWE2_RBX1_39_32 species=Bacillus coahuilensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
phosphatidate cytidylyltransferase
GWD2_RBX1_39_127_gwd2_scaffold_212_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(15511..16227)
DNA (717bp) protein (239aa)
undecaprenyl diphosphate synthase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] Tax=GWF2_RBX1_38_17_curated
undecaprenyl diphosphate synthase (EC:2.5.1.31)
Isoprenyl transferase id=2009873 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_212_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(16338..16505)
DNA (168bp) protein (56aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein id=2009877 bin=GWE2_RBX1_39_32 species=Ilyobacter polytropus genus=Ilyobacter taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
4Fe-4S ferredoxin Tax=GWF2_RBX1_38_17_curated
4Fe-4S ferredoxin
GWD2_RBX1_39_127_gwd2_scaffold_212_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(16533..17078)
DNA (546bp) protein (182aa)
Ribosome-recycling factor id=1858245 bin=GWD2_RBX1-related_39_127 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
frr; ribosome recycling factor; K02838 ribosome recycling factor Tax=GWF2_RBX1_38_17_curated
frr; ribosome recycling factor
GWD2_RBX1_39_127_gwd2_scaffold_212_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(17081..17815)
DNA (735bp) protein (245aa)
pyrH; uridylate kinase (EC:2.7.4.22); K09903 uridylate kinase [EC:2.7.4.22] Tax=GWF2_RBX1_38_17_curated
pyrH; uridylate kinase (EC:2.7.4.22)
Uridylate kinase id=1858248 bin=GWD2_RBX1-related_39_127 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWD2_RBX1_39_127_gwd2_scaffold_212_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

17995..18378
DNA (384bp) protein (128aa)
two component transcriptional regulator id=2009885 bin=GWE2_RBX1_39_32 species=Bacillus coahuilensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
periplasmic sensor hybrid histidine kinase Tax=GWF2_RBX1_38_17_curated
periplasmic sensor hybrid histidine kinase
GWD2_RBX1_39_127_gwd2_scaffold_212_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(18526..19557)
DNA (1032bp) protein (344aa)
Rod shape-determining protein MreB id=1858276 bin=GWD2_RBX1-related_39_127 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=GWF2_RBX1_38_17_curated
MreB/Mrl family cell shape determining protein
GWD2_RBX1_39_127_gwd2_scaffold_212_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(19619..20209)
DNA (591bp) protein (197aa)
maf protein; K06287 septum formation protein id=24610824 bin=RAAC11 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
maf protein; K06287 septum formation protein Tax=GWF2_RBX1_38_17_curated
maf protein
GWD2_RBX1_39_127_gwd2_scaffold_212_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(20184..21263)
DNA (1080bp) protein (360aa)
Transcriptional regulatory protein AlgP (Alginate regulatory proteinalgR3) id=2009901 bin=GWE2_RBX1_39_32 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Transcriptional regulatory protein AlgP (Alginate regulatory proteinalgR3) Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_212_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(21480..22709)
DNA (1230bp) protein (410aa)
folc bifunctional protein; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] Tax=GWF2_RBX1_38_17_curated
Dihydrofolate synthase / Folylpolyglutamate synthase id=1858280 bin=GWD2_RBX1-related_39_127 species=Caloramator australicus genus=Caloramator taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
folc bifunctional protein
GWD2_RBX1_39_127_gwd2_scaffold_212_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists


comp(22718..25315)
DNA (2598bp) protein (866aa)
valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=GWF2_RBX1_38_17_curated
Valine--tRNA ligase id=2009905 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
valyl-tRNA synthetase
GWD2_RBX1_39_127_gwd2_scaffold_212_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(25431..26006)
DNA (576bp) protein (192aa)
Response regulator receiver protein id=2009907 bin=GWE2_RBX1_39_32 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
response regulator receiver protein Tax=GWF2_RBX1_38_17_curated
response regulator receiver protein
GWD2_RBX1_39_127_gwd2_scaffold_212_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(26094..27308)
DNA (1215bp) protein (405aa)
id=2009909 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2009909 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_212_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(27538..28890)
DNA (1353bp) protein (451aa)
Peptidase U62 modulator of DNA gyrase id=2009910 bin=GWE2_RBX1_39_32 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
peptidase U62 modulator of DNA gyrase; K03592 PmbA protein Tax=GWF2_RBX1_38_17_curated
peptidase U62 modulator of DNA gyrase
GWD2_RBX1_39_127_gwd2_scaffold_212_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(28890..30269)
DNA (1380bp) protein (460aa)
Peptidase U62, modulator of DNA gyrase id=1858295 bin=GWD2_RBX1-related_39_127 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
peptidase U62 modulator of DNA gyrase; K03568 TldD protein Tax=GWF2_RBX1_38_17_curated
peptidase U62 modulator of DNA gyrase
GWD2_RBX1_39_127_gwd2_scaffold_212_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(30446..31147)
DNA (702bp) protein (234aa)
id=2009914 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2009914 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_212_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(31147..31443)
DNA (297bp) protein (99aa)
flagellar hook-basal body protein FliE id=2009915 bin=GWE2_RBX1_39_32 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
flagellar hook-basal body complex subunit FliE; K02408 flagellar hook-basal body complex protein FliE Tax=GWF2_RBX1_38_17_curated
flagellar hook-basal body complex subunit FliE
GWD2_RBX1_39_127_gwd2_scaffold_212_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(31455..31640)
DNA (186bp) protein (62aa)
id=24610834 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24610834 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_212_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

32169..33050
DNA (882bp) protein (294aa)
Uncharacterized protein id=2009917 bin=GWE2_RBX1_39_32 species=Aspergillus oryzae genus=Aspergillus taxon_order=Eurotiales taxon_class=Eurotiomycetes phylum=Ascomycota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
AO090113000090; ankyrin repeat-containing protein Tax=GWF2_RBX1_38_17_curated
Ankyrin repeat-containing protein
GWD2_RBX1_39_127_gwd2_scaffold_212_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(33193..33594)
DNA (402bp) protein (134aa)
id=2009919 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2009919 Tax=GWF2_RBX1_38_17_curated
GWD2_RBX1_39_127_gwd2_scaffold_212_30
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

33925..35463
DNA (1539bp) protein (513aa)
Transcriptional regulator, NifA, Fis Family id=2009921 bin=GWE2_RBX1_39_32 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Fis family transcriptional regulator; K02584 Nif-specific regulatory protein Tax=GWF2_RBX1_38_17_curated
Fis family transcriptional regulator
Displaying items 1-30 of 42 in total

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