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GWD2_RBX1_39_127_gwd2_scaffold_2628

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWD2_RBX1_39_127_gwd2_scaffold_2628_1

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3..167
DNA (165bp) protein (55aa)
Integrase id=24610627 bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=RAAC11 organism_group=Unknown_CP
Marine sediment metagenome DNA, contig: S03H2_S00106 {ECO:0000313|EMBL:GAH49659.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Integrase
GWD2_RBX1_39_127_gwd2_scaffold_2628_2
unknown

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183..443
DNA (261bp) protein (87aa)
id=24610626 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24610626 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
GWD2_RBX1_39_127_gwd2_scaffold_2628_trna_1
unknown

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comp(348..418)
DNA (71bp)
transferRNA
GWD2_RBX1_39_127_gwd2_scaffold_2628_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(471..1727)
DNA (1257bp) protein (419aa)
Methyl-accepting chemotaxis sensory transducer with Cache sensor id=1923005 bin=GWE2_RBX1_39_32 species=Desulfitobacterium dichloroeliminans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
methyl-accepting chemotaxis protein Tax=GWF2_RBX1_38_17_curated
methyl-accepting chemotaxis protein
GWD2_RBX1_39_127_gwd2_scaffold_2628_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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2148..3293
DNA (1146bp) protein (382aa)
NusA antitermination factor id=1923004 bin=GWE2_RBX1_39_32 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
NusA antitermination factor; K02600 N utilization substance protein A Tax=GWF2_RBX1_38_17_curated
NusA antitermination factor
GWD2_RBX1_39_127_gwd2_scaffold_2628_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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3385..5871
DNA (2487bp) protein (829aa)
Translation initiation factor IF-2 id=1923003 bin=GWE2_RBX1_39_32 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
translation initiation factor IF-2; K02519 translation initiation factor IF-2 Tax=GWF2_RBX1_38_17_curated
translation initiation factor IF-2
GWD2_RBX1_39_127_gwd2_scaffold_2628_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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5880..6248
DNA (369bp) protein (123aa)
Ribosome-binding factor A id=4397796 bin=GWF2_OP9-related_38_17 species=Moorea producens genus=Moorea taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A Tax=GWF2_RBX1_38_17_curated
rbfA; ribosome-binding factor A
GWD2_RBX1_39_127_gwd2_scaffold_2628_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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6259..7206
DNA (948bp) protein (316aa)
phosphoesterase RecJ domain-containing protein; K06881 phosphoesterase RecJ domain-containing protein id=24610621 bin=RAAC11 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
phosphoesterase RecJ domain-containing protein; K06881 phosphoesterase RecJ domain-containing protein Tax=GWF2_RBX1_38_17_curated
phosphoesterase RecJ domain-containing protein
GWD2_RBX1_39_127_gwd2_scaffold_2628_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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7415..8083
DNA (669bp) protein (223aa)
tRNA pseudouridine synthase B (EC:4.2.1.70); K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=GWF2_RBX1_38_17_curated
tRNA pseudouridine synthase B (EC:4.2.1.70)
tRNA pseudouridine synthase B id=1922998 bin=GWE2_RBX1_39_32 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWD2_RBX1_39_127_gwd2_scaffold_2628_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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8067..8963
DNA (897bp) protein (299aa)
riboflavin biosynthesis protein ribf; K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] Tax=GWF2_RBX1_38_17_curated
Riboflavin biosynthesis protein RibF id=1922996 bin=GWE2_RBX1_39_32 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
riboflavin biosynthesis protein ribf
Displaying 10 items

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