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GWD2_RBX1_39_127_gwd2_scaffold_50_79

Organism: Candidatus Margulisbacteria bacterium GWD2_39_127

near complete RP 49 / 55 BSCG 48 / 51 ASCG 10 / 38
Location: 91382..92158

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=2161464 bin=GWE2_RBX1_39_32 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 259.0
  • Bit_score: 503
  • Evalue 1.20e-139
RNA polymerase sigma 28 subunit FliA/WhiG; K02405 RNA polymerase sigma factor for flagellar operon FliA Tax=GWF2_RBX1_38_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 258.0
  • Bit_score: 503
  • Evalue 1.70e-139
RNA polymerase sigma 28 subunit FliA/WhiG similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 235.0
  • Bit_score: 199
  • Evalue 1.00e-48

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Taxonomy

GWF2_RBX1_38_17_curated → RBX1 → Bacteria

Sequences

DNA sequence
Length: 777
ATGACATATCTGGCTGATACCTATAAAATTAATGAAAAAGAAAAAAAGGCTTCCAGTGTTGCACTTTCTGTAGAGAAAGAACATCTTGTCATCCAGTATATCCCTCTAGTTAAGTATGTTGTCGGTAGAATGGGCATTAATCTGCCTCCCGGTTTAGATAACGATGACCTGGTATCTATCGGATGCTGGGGGTTGATCGATGCCGCTAAGAAATTCGACGAAAACCGAGGGGTTCAGTTTAAGACATACGCCATGACTAGAATTCGCGGCTCCATCCTTGATGAGCTTCGCCGACTGAGTTTGGGTGGCCAAGCGTTATGTAGAAAAGCCCAGATGTTAGAGAAAGCTTTCGCAAAAGTTGAACTCCAGAAAGGGAAGCCTGCTAGTGTAGAGGAAGTTGCGGCTGTACTTCAGATTTCGAAGGATGATGTGGACAAATTGATGGCTGAAGTGAATCTGTCTTTTTTGTTGAGTCTTGATACTAATAATAGCTATGGCGAAGAAGGCGATAATAAAGTAGATACCATTGTTGATCAGAATGCTGAAGGGATTGACGTTTTCATCCAAAAAAATGAGCAGAGAGAAATGCTTGAAAGAGCTTTAGATTGTTTGTCCGATCAAGAAAAAATGGTTATTAATCTGTATTATTATGAGGAATTAACCTTAAAAGAGATTGCTAAAATCCTTAAAGTTTCCGAATCGAGAATATCCCAGATTCACGGAAAAGCTATTTTTCATTTAAAAACAAAGTTAAAAAGACATGATGTAGTATTTTGA
PROTEIN sequence
Length: 259
MTYLADTYKINEKEKKASSVALSVEKEHLVIQYIPLVKYVVGRMGINLPPGLDNDDLVSIGCWGLIDAAKKFDENRGVQFKTYAMTRIRGSILDELRRLSLGGQALCRKAQMLEKAFAKVELQKGKPASVEEVAAVLQISKDDVDKLMAEVNLSFLLSLDTNNSYGEEGDNKVDTIVDQNAEGIDVFIQKNEQREMLERALDCLSDQEKMVINLYYYEELTLKEIAKILKVSESRISQIHGKAIFHLKTKLKRHDVVF*