ggKbase home page

GWD2_RBX1_39_127_gwd2_scaffold_706_11

Organism: Candidatus Margulisbacteria bacterium GWD2_39_127

near complete RP 49 / 55 BSCG 48 / 51 ASCG 10 / 38
Location: comp(8685..9269)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, RpoE id=1980870 bin=GWE2_RBX1_39_32 species=Desulfotomaculum reducens genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 195.0
  • Bit_score: 385
  • Evalue 2.70e-104
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWF2_RBX1_38_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 194.0
  • Bit_score: 385
  • Evalue 3.80e-104
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 36.7
  • Coverage: 188.0
  • Bit_score: 131
  • Evalue 2.00e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWF2_RBX1_38_17_curated → RBX1 → Bacteria

Sequences

DNA sequence
Length: 585
ATGGTGAAGCCTGTGAATGATGACGAATTAGTAGAATCTTTTTTAAAGGGAAATGAGCATGCATTTGAAGGCTTGGTAGATAAATATCACAGGAAAATATTTAAGACGGTTTATGGCATAATTGGCCATTATCATGATGCAATTGATCTTACTCAGGATGTGTTTTTTCAGGTCTACAGAAGTATCCCTAATTATCAGCCTAAAGGGCAATTTCAGTCGTGGGTATTTAAAATAGCATTAAATAGGAGCAGAAACTATATTAGCAAGAAAAAAATACTAACGTTCCTATCCTTGGATTTTGTCTCAAAAACGAGGCAGTCGGCTTTAATTGATAAAACCGACAGAGGTGATATCGAGGGATATTCCGAGAGAAATGAAAAAGTTGAGCTGTTATATGAGGCCCTGAATATTCTCGACTATAATTCGAAAGAAATATTGATACTGAAAGAGATAGATATGCTGGAGTATAAACAAATTGCAGAAATTTTAGGTATCGAAATAGGAACAGTTAAGTCAAGGATATCAAGAGCAAAAGAGAAACTAAAAAAACAATTGATTAAAAGGGGGATAAGCAAATGGATGTAA
PROTEIN sequence
Length: 195
MVKPVNDDELVESFLKGNEHAFEGLVDKYHRKIFKTVYGIIGHYHDAIDLTQDVFFQVYRSIPNYQPKGQFQSWVFKIALNRSRNYISKKKILTFLSLDFVSKTRQSALIDKTDRGDIEGYSERNEKVELLYEALNILDYNSKEILILKEIDMLEYKQIAEILGIEIGTVKSRISRAKEKLKKQLIKRGISKWM*