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gwe1_scaffold_884

Alias: GWE1_WS6_33_547_7

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwe1_scaffold_884_1

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comp(1..162)
DNA (162bp) protein (54aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP54771.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
gwe1_scaffold_884_2
WS6_GWE1_33_547, WS6_GWE1_33_547, WS6_GWE1_33_547, WS6_GWE1_33_547, Doikabacteria, Bacteria

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1781..2116
DNA (336bp) protein (112aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=2 to=13)
gwe1_scaffold_884_3

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comp(2815..3270)
DNA (456bp) protein (152aa)
tRNA/rRNA methyltransferase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DS75_9BACT
tRNA/rRNA methyltransferase {ECO:0000313|EMBL:KKP54733.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
putative SpoU rRNA methylase family protein
no description (db=Gene3D db_id=G3DSA:3.40.1280.10 from=4 to=151 evalue=1.4e-36)
gwe1_scaffold_884_4

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comp(3270..5291)
DNA (2022bp) protein (674aa)
ATP-dependent DNA helicase RecG n=1 Tax=Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL) RepID=E3DQU0_HALPG rbh
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:KKP54732.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
hypothetical protein
seg (db=Seg db_id=seg from=2 to=11)
gwe1_scaffold_884_5
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

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comp(5294..5404)
DNA (111bp) protein (37aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=11 to=33)
Tax=RIFOXYB1_FULL_WS6_33_15_curated
gwe1_scaffold_884_6

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comp(5427..6884)
DNA (1458bp) protein (486aa)
GTP pyrophosphokinase (RelA/SpoT) n=8 Tax=Clostridium difficile RepID=Q183H8_CLOD6
GTP diphosphokinase {ECO:0000313|EMBL:KKP54730.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
relA; GTP pyrophosphokinase
seg (db=Seg db_id=seg from=96 to=107)
gwe1_scaffold_884_7
WS6_GWF1_33_233, WS6, Bacteria

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comp(6931..8187)
DNA (1257bp) protein (419aa)
Tyrosyl-tRNA synthetase, tyrosyl-tRNA synthetase {ECO:0000313|EMBL:KKP45155.1}; EC=6.1.1.1 {ECO:0000313|EMBL:KKP45155.1};; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate
Tyrosine--tRNA ligase n=5 Tax=Brachyspira RepID=C0QX88_BRAHW rbh
hypothetical protein
AA_TRNA_LIGASE_I (db=PatternScan db_id=PS00178 from=46 to=56 evalue=0.0 interpro_id=IPR001412 interpro_description=Aminoacyl-tRNA synthetase, class I, conserved site GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: tRNA aminoacylation for protein translation (GO:0006418))
gwe1_scaffold_884_8
WS6_GWF1_33_233, WS6, Bacteria

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comp(8227..9444)
DNA (1218bp) protein (406aa)
AAA ATPase, central domain protein n=12 Tax=Thermoanaerobacter RepID=B0K6V1_THEPX rbh
Uncharacterized protein {ECO:0000313|EMBL:KKP45154.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
hypothetical protein
(db=HMMPfam db_id=PF03215 from=170 to=218 evalue=0.00011)
gwe1_scaffold_884_9
GWD1_WS6_35_594, WS6, Bacteria

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comp(9490..10017)
DNA (528bp) protein (176aa)
Methyltransferase type 12 n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FHU8_DESAA
Methyltransferase type 12 {ECO:0000313|EMBL:KKP82115.1}; TaxID=1619092 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWD1_35_594.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=5 to=21)
gwe1_scaffold_884_10
WS6_GWF1_33_233, WS6, Bacteria

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10055..10741
DNA (687bp) protein (229aa)
Pseudouridylate synthase, tRNA pseudouridine55 synthase {ECO:0000313|EMBL:KKP45152.1}; EC=5.4.99.25 {ECO:0000313|EMBL:KKP45152.1};; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="c
tRNA pseudouridine synthase B n=1 Tax=Anaerococcus hydrogenalis ACS-025-V-Sch4 RepID=F0H0Z3_9FIRM
pseudouridylate synthase
seg (db=Seg db_id=seg from=99 to=113)
gwe1_scaffold_884_11

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10752..11450
DNA (699bp) protein (233aa)
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LVJ8_HIPMA
Ribosomal RNA small subunit methyltransferase I {ECO:0000313|EMBL:KKP54725.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
hypothetical protein
RSMI (db=PatternScan db_id=PS01296 from=83 to=94 evalue=0.0 interpro_id=IPR018063 interpro_description=SAM-dependent methyltransferase RsmI, conserved site GO=Molecular Function: methyltransferase activity (GO:0008168))
gwe1_scaffold_884_12

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comp(11419..12324)
DNA (906bp) protein (302aa)
Hydrolase, TatD family n=2 Tax=Sulfurihydrogenibium RepID=B2V6K5_SULSY
Hydrolase, TatD family {ECO:0000313|EMBL:KKP54724.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
hydrolase TatD
TATD_3 (db=PatternScan db_id=PS01091 from=226 to=242 evalue=0.0 interpro_id=IPR018228 interpro_description=Deoxyribonuclease, TatD-related, conserved site GO=Molecular Function: endodeoxyribonuclease activity, producing 5'-phosphomonoesters (GO:0016888))
gwe1_scaffold_884_13
WS6_GWF1_33_233, WS6, Bacteria

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12405..13097
DNA (693bp) protein (231aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP45149.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
gwe1_scaffold_884_14
GWD1_WS6_35_594, WS6, Bacteria

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comp(13089..14117)
DNA (1029bp) protein (343aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=MRAY_HAHCH
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000313|EMBL:KKP82110.1}; TaxID=1619092 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWD1_35_594.
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
gwe1_scaffold_884_15

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comp(14149..15993)
DNA (1845bp) protein (615aa)
Peptidoglycan glycosyltransferase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCK5_THET1 rbh
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:KKP54721.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=30 to=52)
gwe1_scaffold_884_16

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comp(15986..16300)
DNA (315bp) protein (105aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP54720.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
coiled-coil (db=Coil db_id=coil from=41 to=62 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
gwe1_scaffold_884_17

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comp(16317..17063)
DNA (747bp) protein (249aa)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA) RepID=I4BW68_ANAMD
Ribosomal RNA small subunit methyltransferase H {ECO:0000313|EMBL:KKP54719.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
S-adenosyl-methyltransferase MraW
TIGR00006: S-adenosyl-methyltransferase Mra (db=HMMTigr db_id=TIGR00006 from=1 to=248 evalue=1.6e-51 interpro_id=IPR002903 interpro_description=S-adenosyl-L-methionine-dependent methyltransferase, MraW GO=Molecular Function: methyltransferase activity (GO:0008168))
gwe1_scaffold_884_18
WS6_GWE1_33_547, WS6_GWE1_33_547, WS6_GWE1_33_547, WS6_GWE1_33_547, Doikabacteria, Bacteria

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17265..17630
DNA (366bp) protein (122aa)

This feature has no annotations

gwe1_scaffold_884_19
WS6_GWF1_33_233, WS6, Bacteria

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comp(17821..19113)
DNA (1293bp) protein (431aa)
3-phosphoshikimate 1-carboxyvinyltransferase, UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000313|EMBL:KKP45143.1}; EC=2.5.1.7 {ECO:0000313|EMBL:KKP45143.1};; TaxID=1619096 species="Bacteri
EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZQ87_OPITP rbh
3-phosphoshikimate 1-carboxyvinyltransferase
(db=HMMPfam db_id=PF00275 from=6 to=419 evalue=1.5e-67 interpro_id=IPR001986 interpro_description=Enolpyruvate transferase domain GO=Molecular Function: transferase activity, transferring alkyl or aryl (other than methyl) groups (GO:0016765))
gwe1_scaffold_884_20

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comp(19123..19743)
DNA (621bp) protein (207aa)
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4ALE5_FLELS
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000313|EMBL:KKP54716.1}; Flags: Fragment;; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW201
UDP-N-ACETYLENOLPYRUVOYLGLUCOSAMINE REDUCTASE (db=HMMPanther db_id=PTHR21071 from=1 to=206 evalue=1.7e-08 interpro_id=IPR003170 interpro_description=UDP-N-acetylenolpyruvoylglucosamine reductase GO=Molecular Function: UDP-N-acetylmuramate dehydrogenase activity (GO:0008762), Biological Process: oxidation-reduction process (GO:0055114))
Displaying 20 items

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