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gwe1_scaffold_899

Alias: GWE1_WS6_33_547_8

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Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwe1_scaffold_899_1
GWD1_WS6_35_594, WS6, Bacteria

Not on your lists

2..496
DNA (495bp) protein (165aa)
Isoleucine--tRNA ligase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGU1_9FIRM
Isoleucine-tRNA ligase {ECO:0000313|EMBL:KKP81739.1}; TaxID=1619092 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWD1_35_594.;"
hypothetical protein
seg (db=Seg db_id=seg from=114 to=128)
gwe1_scaffold_899_2
GWD1_WS6_35_594, WS6, Bacteria

Not on your lists

comp(501..1025)
DNA (525bp) protein (175aa)
CarD-like transcriptional regulator n=2 Tax=Brevibacillus RepID=J2HEX6_9BACL
CarD-like protein transcriptional regulator {ECO:0000313|EMBL:KKP81740.1}; TaxID=1619092 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWD1_35_594.;"
CarD family transcripitonal regulator
seg (db=Seg db_id=seg from=65 to=84)
gwe1_scaffold_899_3
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

1070..2107
DNA (1038bp) protein (346aa)
Putative uncharacterized protein n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVD4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKP44338.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
hypothetical protein
seg (db=Seg db_id=seg from=10 to=25)
gwe1_scaffold_899_4
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(2078..2773)
DNA (696bp) protein (232aa)
Methyltransferase FkbM family protein n=1 Tax=sediment metagenome RepID=D9PJT2_9ZZZZ
FkbM family methyltransferase {ECO:0000313|EMBL:KKP44339.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
FkbM family methyltransferase
fkbM_fam: methyltransferase, FkbM family (db=HMMTigr db_id=TIGR01444 from=42 to=186 evalue=2.5e-28 interpro_id=IPR006342 interpro_description=Methyltransferase FkbM)
gwe1_scaffold_899_5
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(2787..3380)
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) RepID=F2NBM7_CORGP
Uncharacterized protein {ECO:0000313|EMBL:KKP44340.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
hypothetical protein
Lysozyme-like (db=superfamily db_id=SSF53955 from=96 to=138 evalue=7.6e-06 interpro_id=IPR023346 interpro_description=Lysozyme-like domain)
gwe1_scaffold_899_6
GWD1_WS6_35_594, WS6, Bacteria

Not on your lists

5150..5518
DNA (369bp) protein (123aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP81744.1}; TaxID=1619092 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWD1_35_594.;"
seg (db=Seg db_id=seg from=2 to=18)
gwe1_scaffold_899_7
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

Not on your lists

5533..5769
DNA (237bp) protein (79aa)
hypothetical protein Tax=RIFOXYB1_FULL_WS6_33_15_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=51 to=73)
seg (db=Seg db_id=seg from=43 to=66)
gwe1_scaffold_899_8

Not on your lists

comp(5771..6145)
DNA (375bp) protein (125aa)
Desulfoferrodoxin n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8VW68_DESAS
Desulfoferrodoxin {ECO:0000313|EMBL:KKP54421.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
desulfoferrodoxin
Superoxide reductase-like (db=superfamily db_id=SSF49367 from=36 to=124 evalue=1.5e-27 interpro_id=IPR002742 interpro_description=Desulfoferrodoxin, ferrous iron-binding domain GO=Molecular Function: iron ion binding (GO:0005506), Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation-reduction process (GO:0055114))
gwe1_scaffold_899_9
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

Not on your lists

6517..6969
DNA (453bp) protein (151aa)
id=5100078 Tax=RIFOXYB1_FULL_WS6_33_15_curated
gwe1_scaffold_899_10
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(6970..8259)
DNA (1290bp) protein (430aa)
permease n=1 Tax=Clostridium arbusti SL206 RepID=UPI000288F17F
Uncharacterized protein {ECO:0000313|EMBL:KKP44346.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
gwe1_scaffold_899_11
GWD1_WS6_35_594, WS6, Bacteria

Not on your lists

comp(8243..8911)
DNA (669bp) protein (223aa)
ABC-type antimicrobial peptide transport system, ATPase component (EC:3.6.3.-)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5Z8_9FIRM
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:KKP81749.1}; TaxID=1619092 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=144 to=158 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
gwe1_scaffold_899_12
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

Not on your lists

comp(10872..10982)
DNA (111bp) protein (37aa)
seg Tax=RIFOXYB1_FULL_WS6_33_15_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=12 to=28)
gwe1_scaffold_899_13
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(10979..11290)
DNA (312bp) protein (104aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP44350.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=51 to=73)
seg (db=Seg db_id=seg from=4 to=15)
gwe1_scaffold_899_14
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(11361..11876)
DNA (516bp) protein (172aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP44351.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
seg (db=Seg db_id=seg from=4 to=21)
gwe1_scaffold_899_15
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(12001..13809)
DNA (1809bp) protein (603aa)
Ig domain protein, group 1 domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020K9_SOLUE
Ig domain-containing protein {ECO:0000313|EMBL:KKP44352.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
Ig domain-containing protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=23)
gwe1_scaffold_899_16
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(13937..15193)
DNA (1257bp) protein (419aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP44353.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
seg (db=Seg db_id=seg from=11 to=22)
gwe1_scaffold_899_17
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

15261..16073
DNA (813bp) protein (271aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP44354.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
Purine and uridine phosphorylases (db=superfamily db_id=SSF53167 from=20 to=270 evalue=1.4e-19)
(db=HMMPfam db_id=PF01048 from=93 to=201 evalue=5.5e-18 interpro_id=IPR000845 interpro_description=Nucleoside phosphorylase domain GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: nucleoside metabolic process (GO:0009116))
no description (db=Gene3D db_id=G3DSA:3.40.50.1580 from=82 to=262 evalue=7.0e-11)
gwe1_scaffold_899_18
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(16059..16445)
DNA (387bp) protein (129aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP44355.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
seg (db=Seg db_id=seg from=12 to=24)
(db=HMMPfam db_id=PF00717 from=46 to=114 evalue=1.8e-05 interpro_id=IPR019759 interpro_description=Peptidase S24/S26A/S26B)
gwe1_scaffold_899_19

Not on your lists

comp(16459..16941)
DNA (483bp) protein (161aa)
Flavodoxin n=1 Tax=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) RepID=A8F7J7_THELT
Flavodoxin {ECO:0000313|EMBL:KKP54973.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
flavodoxin
FLAVODOXIN (db=PatternScan db_id=PS00201 from=5 to=21 evalue=0.0 interpro_id=IPR001226 interpro_description=Flavodoxin, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: FMN binding (GO:0010181))
gwe1_scaffold_899_20

Not on your lists

comp(17027..17428)
DNA (402bp) protein (134aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP54972.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
gwe1_scaffold_899_21

Not on your lists

comp(17485..17808)
DNA (324bp) protein (108aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP54971.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=88 to=106)
gwe1_scaffold_899_22

Not on your lists

17955..18827
DNA (873bp) protein (291aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP54970.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
gwe1_scaffold_899_23

Not on your lists

comp(18943..19407)
DNA (465bp) protein (155aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP54969.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
gwe1_scaffold_899_24
GWD1_WS6_35_594, WS6, Bacteria

Not on your lists

19559..20155
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Prunus persica RepID=M5X1N6_PRUPE
Chloroplast-specific ribosomal protein {ECO:0000313|EMBL:KKP81625.1}; TaxID=1619092 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWD1_35_594.;"
SSU ribosomal protein S30P,sigma 54 modulation protein
no description (db=Gene3D db_id=G3DSA:3.30.160.100 from=4 to=116 evalue=1.8e-14 interpro_id=IPR003489 interpro_description=Ribosomal protein S30Ae/sigma 54 modulation protein GO=Molecular Function: binding (GO:0005488), Biological Process: primary metabolic process (GO:0044238))
gwe1_scaffold_899_25
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(20204..21070)
DNA (867bp) protein (289aa)
Foldase foldase protein PrsA {ECO:0000313|EMBL:KKP44362.1}; EC=5.2.1.8 {ECO:0000313|EMBL:KKP44362.1};; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacteri
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J1X8_9BACL
peptidylprolyl isomerase
transmembrane_regions (db=TMHMM db_id=tmhmm from=54 to=76)
gwe1_scaffold_899_26

Not on your lists

comp(21150..22469)
DNA (1320bp) protein (440aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3D0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKP54966.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
Membrane-bound metallopeptidase
coiled-coil (db=Coil db_id=coil from=42 to=63 evalue=NA)
gwe1_scaffold_899_27
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(22473..23399)
DNA (927bp) protein (309aa)
Cell division protein FtsX n=2 Tax=Dialister micraerophilus RepID=E4L8Q4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKP44364.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=19 to=41)
gwe1_scaffold_899_28
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(23403..24341)
DNA (939bp) protein (313aa)
Cell division ATP-binding protein FtsE, cell division transport system ATP-binding protein {ECO:0000313|EMBL:KKP44365.1}; EC=3.6.3.28 {ECO:0000313|EMBL:KKP44365.1};; TaxID=1619096 species="Bacteria; c
Cell division ATP-binding protein FtsE n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NDQ4_9LACT
ftsE; cell division ATP-binding protein FtsE
coiled-coil (db=Coil db_id=coil from=230 to=251 evalue=NA)
gwe1_scaffold_899_29
GWD1_WS6_35_594, WS6, Bacteria

Not on your lists

comp(24376..25458)
DNA (1083bp) protein (361aa)
Peptide chain release factor 2 n=5 Tax=Synechococcus RepID=RF2_SYNPX rbh
Peptide chain release factor 2 {ECO:0000313|EMBL:KKP81620.1}; TaxID=1619092 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWD1_35_594.;"
prfB; peptide chain release factor 2
RF_PROK_I (db=PatternScan db_id=PS00745 from=240 to=256 evalue=0.0 interpro_id=IPR000352 interpro_description=Peptide chain release factor class I/class II GO=Molecular Function: translation release factor activity (GO:0003747), Biological Process: translational termination (GO:0006415))
gwe1_scaffold_899_30
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

25504..27156
DNA (1653bp) protein (551aa)
phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=GPMI_HALOH
Phosphoglyceromutase, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000313|EMBL:KKP44367.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division W
(db=HMMPfam db_id=PF01676 from=25 to=543 evalue=1.6e-66 interpro_id=IPR006124 interpro_description=Metalloenzyme GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: metal ion binding (GO:0046872))
Displaying items 1-30 of 35 in total

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