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gwe1_scaffold_1616

Alias: GWE1_WS6_33_547_19

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwe1_scaffold_1616_1
WS6_GWF1_33_233, WS6, Bacteria

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comp(705..2546)
DNA (1842bp) protein (614aa)
Thermostable DNA ligase, DNA ligase 1 {ECO:0000313|EMBL:KKP45914.1}; EC=6.5.1.1 {ECO:0000313|EMBL:KKP45914.1};; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS
thermostable DNA ligase (EC:6.5.1.1)
Probable DNA ligase n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVC2_9BACT rbh
dnl1: DNA ligase I, ATP-dependent (dnl1) (db=HMMTigr db_id=TIGR00574 from=58 to=608 evalue=1.0e-75 interpro_id=IPR000977 interpro_description=DNA ligase, ATP-dependent GO=Molecular Function: DNA ligase (ATP) activity (GO:0003910), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA replication (GO:0006260), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
gwe1_scaffold_1616_2
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(2548..2931)
DNA (384bp) protein (128aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP45913.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
gwe1_scaffold_1616_3
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(2958..5651)
DNA (2694bp) protein (898aa)
Polymerase I, DNA polymerase I protein {ECO:0000313|EMBL:KKP45912.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KKP45912.1};; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division W
DNA polymerase n=1 Tax=Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC) RepID=D8GRN8_CLOLD rbh
DNA polymerase I
coiled-coil (db=Coil db_id=coil from=519 to=540 evalue=NA)
gwe1_scaffold_1616_4
WS6_GWC1_33_20, WS6, Bacteria

Not on your lists

comp(5692..7563)
DNA (1872bp) protein (624aa)
ATP-dependent metalloprotease FtsH, cell division protease FtsH {ECO:0000313|EMBL:KKP43903.1}; EC=3.4.24.- {ECO:0000313|EMBL:KKP43903.1};; TaxID=1619089 species="Bacteria; candidate division WS6.;" so
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Caloramator australicus RC3 RepID=I7LHU6_9CLOT rbh
ATP-dependent metalloprotease FtsH
AAA (db=PatternScan db_id=PS00674 from=322 to=340 evalue=0.0 interpro_id=IPR003960 interpro_description=ATPase, AAA-type, conserved site GO=Molecular Function: ATP binding (GO:0005524))
gwe1_scaffold_1616_5

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comp(7698..8258)
DNA (561bp) protein (187aa)
Elongation factor P n=2 Tax=Spirochaeta thermophila RepID=E0RTH9_SPITD
Elongation factor P {ECO:0000313|EMBL:KKP55368.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
hypothetical protein
EFP (db=PatternScan db_id=PS01275 from=150 to=169 evalue=0.0 interpro_id=IPR013852 interpro_description=Translation elongation factor P/YeiP, conserved site)
gwe1_scaffold_1616_6

Not on your lists

8366..8914
DNA (549bp) protein (183aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=4 Tax=Thermoanaerobacterium RepID=D9TRA9_THETC
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:KKP55367.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
seg (db=Seg db_id=seg from=76 to=85)
gwe1_scaffold_1616_7
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(9028..9483)
DNA (456bp) protein (152aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP45908.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=47)
seg (db=Seg db_id=seg from=31 to=50)
(db=HMMPfam db_id=PF04977 from=40 to=112 evalue=6.0e-09 interpro_id=IPR007060 interpro_description=Septum formation initiator GO=Biological Process: cell cycle (GO:0007049))
gwe1_scaffold_1616_8
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

Not on your lists

9620..10507
DNA (888bp) protein (296aa)
Tyrosine recombinase XerC n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LTM8_TEPAE
xerC; site-specific tyrosine recombinase XerC; K03733 integrase/recombinase XerC Tax=RIFOXYB1_FULL_WS6_33_15_curated
hypothetical protein
seg (db=Seg db_id=seg from=45 to=55)
gwe1_scaffold_1616_9

Not on your lists

comp(10710..13232)
DNA (2523bp) protein (841aa)
Putative uncharacterized protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KS42_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:KKP55364.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=43 to=65)
gwe1_scaffold_1616_10

Not on your lists

comp(13301..13609)
DNA (309bp) protein (103aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP55363.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
gwe1_scaffold_1616_11

Not on your lists

comp(13621..14064)
DNA (444bp) protein (148aa)
SsrA-binding protein n=1 Tax=Sulfurihydrogenibium sp. (strain YO3AOP1) RepID=SSRP_SULSY
SsrA-binding protein {ECO:0000313|EMBL:KKP55362.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
smpB; SsrA-binding protein
coiled-coil (db=Coil db_id=coil from=120 to=145 evalue=NA)
gwe1_scaffold_1616_12
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(14079..16376)
DNA (2298bp) protein (766aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP45903.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
coiled-coil (db=Coil db_id=coil from=76 to=97 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=360 to=377)
seg (db=Seg db_id=seg from=213 to=231)
gwe1_scaffold_1616_13

Not on your lists

comp(16381..16638)
DNA (258bp) protein (86aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP55360.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=22 to=41)
seg (db=Seg db_id=seg from=72 to=84)
gwe1_scaffold_1616_14
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(16640..17269)
DNA (630bp) protein (210aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP45901.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=62 to=84)
gwe1_scaffold_1616_15

Not on your lists

comp(17314..17679)
DNA (366bp) protein (122aa)
Tat (Twin-arginine translocation) pathway signal sequence domain protein {ECO:0000313|EMBL:KKP55358.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacter
seg (db=Seg db_id=seg from=60 to=71)
Displaying 15 items

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