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gwe1_scaffold_1811

Alias: GWE1_WS6_33_547_21

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwe1_scaffold_1811_1
WS6_GWF1_33_233, WS6, Bacteria

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1..243
DNA (243bp) protein (81aa)
Glutamyl-tRNA(Gln) amidotransferase subunit B, aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B {ECO:0000313|EMBL:KKP44485.1}; EC=6.3.5.6 {ECO:0000313|EMBL:KKP44485.1};; Flags: Fragme
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LUG1_HIPMA
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
no description (db=HMMSmart db_id=SM00845 from=1 to=78 evalue=0.0045 interpro_id=IPR018027 interpro_description=Asn/Gln amidotransferase GO=Molecular Function: carbon-nitrogen ligase activity, with glutamine as amido-N-donor (GO:0016884))
gwe1_scaffold_1811_2
WS6_GWF1_33_233, WS6, Bacteria

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236..532
DNA (297bp) protein (99aa)
Glutamyl-tRNA (Gln) amidotransferase subunit C, aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C {ECO:0000313|EMBL:KKP44486.1}; EC=6.3.5.6 {ECO:0000313|EMBL:KKP44486.1};; TaxID=161909
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Macrococcus caseolyticus (strain JCSC5402) RepID=GATC_MACCJ
gatC; glutamyl-tRNA (Gln) amidotransferase subunit C
gatC: glutamyl-tRNA(Gln) and/or aspartyl-tRN (db=HMMTigr db_id=TIGR00135 from=1 to=92 evalue=5.7e-24 interpro_id=IPR003837 interpro_description=Glu-tRNAGln amidotransferase, C subunit GO=Biological Process: regulation of translational fidelity (GO:0006450))
gwe1_scaffold_1811_3
WS6_GWF1_33_233, WS6, Bacteria

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1048..1653
DNA (606bp) protein (202aa)
Signal peptidase I, signal peptidase I {ECO:0000313|EMBL:KKP44487.1}; EC=3.4.21.89 {ECO:0000313|EMBL:KKP44487.1};; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division
signal peptidase I (EC:3.4.21.89)
UPI000287B912 related cluster n=1 Tax=unknown RepID=UPI000287B912
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
gwe1_scaffold_1811_4
WS6_GWF1_33_233, WS6, Bacteria

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1689..2480
DNA (792bp) protein (264aa)
Chromosome segregation ATPase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VNC1_CLOSH
Cobyrinic acid ac-diamide synthase, chromosome partitioning protein {ECO:0000313|EMBL:KKP44488.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium G
chromosome segregation ATPase
seg (db=Seg db_id=seg from=124 to=135)
gwe1_scaffold_1811_5
WS6_GWF1_33_233, WS6, Bacteria

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2499..3368
DNA (870bp) protein (290aa)
ParB-like partition protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7S2_SPHTD
ParB-like protein partition protein, chromosome partitioning protein, ParB family {ECO:0000313|EMBL:KKP44489.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division W
parB-like partition protein
seg (db=Seg db_id=seg from=14 to=25)
gwe1_scaffold_1811_6

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comp(3365..4108)
DNA (744bp) protein (248aa)
spoU3; RNA methyltransferase, TrmH family group 3 (EC:2.1.1.-)
RNA methyltransferase, TrmH family group 3 n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B3Y9_CLOA9
RNA methyltransferase, TrmH family group 3 {ECO:0000313|EMBL:KKP54949.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
rRNA_methyl_3: RNA methyltransferase, T (db=HMMTigr db_id=TIGR00186 from=5 to=245 evalue=1.5e-44 interpro_id=IPR004441 interpro_description=RNA methyltransferase TrmH family GO=Biological Process: RNA processing (GO:0006396), Molecular Function: RNA methyltransferase activity (GO:0008173))
gwe1_scaffold_1811_7
WS6_GWC1_33_20, WS6, Bacteria

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comp(4114..4380)
DNA (267bp) protein (89aa)
50S ribosomal protein L27 n=1 Tax=Candidatus Uzinura diaspidicola str. ASNER RepID=L7VJJ6_9FLAO
50S ribosomal protein L27, large subunit ribosomal protein L27 {ECO:0000313|EMBL:KKP43458.1}; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011
rpmA; 50S ribosomal protein L27
RIBOSOMALL27 (db=FPrintScan db_id=PR00063 from=4 to=28 evalue=1.2e-16 interpro_id=IPR001684 interpro_description=Ribosomal protein L27 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
gwe1_scaffold_1811_8
GWD1_WS6_35_594, WS6, Bacteria

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comp(4406..5572)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HJD7_PYRSN
Uncharacterized protein {ECO:0000313|EMBL:KKP81659.1}; TaxID=1619092 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWD1_35_594.;"
hypothetical protein
UPF0020 (db=PatternScan db_id=PS01261 from=208 to=219 evalue=0.0 interpro_id=IPR000241 interpro_description=Putative RNA methylase)
gwe1_scaffold_1811_9
WS6_GWF1_33_233, WS6, Bacteria

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comp(5573..5905)
DNA (333bp) protein (111aa)
50S ribosomal protein L21 n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEQ3_THET1
50S ribosomal protein L21, large subunit ribosomal protein L21 {ECO:0000313|EMBL:KKP44493.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011
50S ribosomal protein L21
(db=HMMPfam db_id=PF00829 from=10 to=103 evalue=1.4e-28 interpro_id=IPR001787 interpro_description=Ribosomal protein L21 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
gwe1_scaffold_1811_10
WS6_GWF1_33_233, WS6, Bacteria

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comp(5930..7237)
DNA (1308bp) protein (436aa)
Rod shape-determining protein RodA n=1 Tax=Cloacamonas acidaminovorans (strain Evry) RepID=B0VJH4_CLOAI
Rod shape-determining protein, rod shape determining protein RodA {ECO:0000313|EMBL:KKP44494.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2
mreB-2; rod shape-determining protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
gwe1_scaffold_1811_11
WS6_GWF1_33_233, WS6, Bacteria

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comp(7234..7455)
DNA (222bp) protein (74aa)
UPF0235 protein L8106_18212 n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YYT1_LYNSP
Uncharacterized protein {ECO:0000313|EMBL:KKP44495.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
hypothetical protein
YggU-like (db=superfamily db_id=SSF69786 from=1 to=72 evalue=1.0e-10 interpro_id=IPR003746 interpro_description=Protein of unknown function DUF167)
gwe1_scaffold_1811_12
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

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comp(7458..8705)
DNA (1248bp) protein (416aa)
Cell division protein FtsZ n=3 Tax=Planococcus RepID=E7RHK9_9BACL rbh
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RIFOXYB1_FULL_WS6_33_15_curated
cell division protein FtsZ
FTSZ_2 (db=PatternScan db_id=PS01135 from=97 to=118 evalue=0.0 interpro_id=IPR020805 interpro_description=Cell division protein FtsZ, conserved site GO=Molecular Function: GTP binding (GO:0005525), Cellular Component: cytoplasm (GO:0005737))
gwe1_scaffold_1811_13
WS6_GWF1_33_233, WS6, Bacteria

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comp(8740..9666)
DNA (927bp) protein (309aa)
Cell division protein ftsA n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5STJ6_9BACT
Cell division protein, cell division protein FtsA {ECO:0000313|EMBL:KKP44497.1}; Flags: Fragment;; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium G
cell division protein
no description (db=HMMSmart db_id=SM00842 from=1 to=70 evalue=0.0094 interpro_id=IPR003494 interpro_description=Cell division protein FtsA domain GO=Biological Process: cell cycle (GO:0007049))
Displaying 13 items

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