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TA06_GWE2_final_5

Alias: TA06_final5_5

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Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
TA06_GWE2_final_5_1
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

2..379
DNA (378bp) protein (126aa)
tuf1; elongation factor Tu; K02358 elongation factor Tu Tax=RBG_16_Zixibacteria_43_9_curated
Elongation factor Tu alias=RBG1_1599,RBG1_C00001G01599 id=1251157 tax=RBG1 species=uncultured Chlorobi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chlorobi
elongation factor Tu
TA06_GWE2_final_5_2
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists


440..754
DNA (315bp) protein (105aa)
30S ribosomal protein S10 alias=gwe2_scaffold_515_78 id=2070346 tax=TA06 species=SAR11 cluster genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria
rpsJ; 30S ribosomal protein S10
Tax=RIFOXYC12_FULL_TA06_54_24_curated
TA06_GWE2_final_5_3
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists


812..1432
DNA (621bp) protein (207aa)
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=RIFOXYC12_FULL_TA06_54_24_curated
50S ribosomal protein L3 alias=gwe2_scaffold_515_77 id=2070344 tax=TA06 species=Herpetosiphon aurantiacus DSM 785 genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi rbh
rplC; 50S ribosomal protein L3
TA06_GWE2_final_5_4
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists


1448..2074
DNA (627bp) protein (209aa)
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=RIFOXYC12_FULL_TA06_54_24_curated
50S ribosomal protein L4 alias=gwe2_scaffold_515_76 id=2070340 tax=TA06 species=Alkaliphilus metalliredigens QYMF genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes rbh
rplD; 50S ribosomal protein L4
TA06_GWE2_final_5_5
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists


2071..2355
DNA (285bp) protein (95aa)
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=RIFOXYC12_FULL_TA06_54_24_curated
50S ribosomal protein L23 alias=gwe2_scaffold_515_75 id=2070334 tax=TA06 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae
rplW; 50S ribosomal protein L23
TA06_GWE2_final_5_6
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists


2516..3340
DNA (825bp) protein (275aa)
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RIFOXYC12_FULL_TA06_54_24_curated
50S ribosomal protein L2 alias=gwe2_scaffold_515_74 id=2070330 tax=TA06 species=Ignavibacterium album JCM 16511 genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteria rbh
rplB; 50S ribosomal protein L2
TA06_GWE2_final_5_7
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists


3340..3690
DNA (351bp) protein (117aa)
rpsS; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=RIFOXYC12_FULL_TA06_54_24_curated
30S ribosomal protein S19 alias=gwe2_scaffold_515_73 id=2070326 tax=TA06 species=uncultured Chlorobi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chlorobi
30S ribosomal protein S19
TA06_GWE2_final_5_8
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists


3708..4055
DNA (348bp) protein (116aa)
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=RIFOXYC12_FULL_TA06_54_24_curated
50S ribosomal protein L22 alias=gwe2_scaffold_515_72 id=2070322 tax=TA06 species=Cellulomonas genus=Cellulomonas taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria
50S ribosomal protein L22
TA06_GWE2_final_5_9
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists


4074..4721
DNA (648bp) protein (216aa)
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RIFOXYC12_FULL_TA06_54_24_curated
30S ribosomal protein S3 alias=gwe2_scaffold_515_71 id=2070318 tax=TA06 species=Rhodospirillum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria rbh
rpsC; 30S ribosomal protein S3
TA06_GWE2_final_5_10
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists


4758..5186
DNA (429bp) protein (143aa)
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RIFOXYC12_FULL_TA06_54_24_curated
50S ribosomal protein L16 alias=gwe2_scaffold_515_70 id=2070315 tax=TA06 species=Thermaerobacter genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes
50S ribosomal protein L16
TA06_GWE2_final_5_11
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists


5183..5437
DNA (255bp) protein (85aa)
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 Tax=RIFOXYC12_FULL_TA06_54_24_curated
TA06_GWE2_final_5_12
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists


5443..5700
DNA (258bp) protein (86aa)
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RIFOXYC12_FULL_TA06_54_24_curated
30S ribosomal protein S17 alias=gwe2_scaffold_515_68 id=2070311 tax=TA06 species=Lachnospiraceae genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes
30S ribosomal protein S17
TA06_GWE2_final_5_13
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists


5776..6144
DNA (369bp) protein (123aa)
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RIFOXYC12_FULL_TA06_54_24_curated
50S ribosomal protein L14 alias=gwe2_scaffold_515_67 id=2070308 tax=TA06 species=Caldithrix abyssi DSM 13497 genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown
50S ribosomal protein L14
TA06_GWE2_final_5_14
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists


6158..6475
DNA (318bp) protein (106aa)
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RIFOXYC12_FULL_TA06_54_24_curated
50S ribosomal protein L24 alias=gwe2_scaffold_515_66 id=2070304 tax=TA06 species=Carboxydothermus hydrogenoformans Z-2901 genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes
rplX; 50S ribosomal protein L24
TA06_GWE2_final_5_15
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists


6600..7142
DNA (543bp) protein (181aa)
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RIFOXYC12_FULL_TA06_54_24_curated
50S ribosomal protein L5 alias=gwe2_scaffold_515_65 id=2070301 tax=TA06 species=Pelotomaculum thermopropionicum SI genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes rbh
rplE; 50S ribosomal protein L5
TA06_GWE2_final_5_16
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists


7206..7388
DNA (183bp) protein (61aa)
30S ribosomal protein S14P; K02954 small subunit ribosomal protein S14 Tax=RIFOXYC12_FULL_TA06_54_24_curated
30S ribosomal protein S14 type Z alias=gwe2_scaffold_515_64 id=2070298 tax=TA06 species=Coriobacteriaceae genus=unknown taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria
30S ribosomal protein S14P
TA06_GWE2_final_5_17
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists


7422..7820
DNA (399bp) protein (133aa)
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RIFOXYC12_FULL_TA06_54_24_curated
30S ribosomal protein S8 alias=gwe2_scaffold_515_63 id=2070295 tax=TA06 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria
rpsH; 30S ribosomal protein S8
TA06_GWE2_final_5_18
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists


7848..8429
DNA (582bp) protein (194aa)
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFOXYC12_FULL_TA06_54_24_curated
50S ribosomal protein L6 alias=gwe2_scaffold_515_62 id=2070292 tax=TA06 species=Deferribacter desulfuricans SSM1 genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres rbh
rplF; 50S ribosomal protein L6
TA06_GWE2_final_5_19
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists


8533..8886
DNA (354bp) protein (118aa)
rplR; 50S ribosomal protein L18 Tax=RIFOXYC12_FULL_TA06_54_24_curated
50S ribosomal protein L18, cyanelle alias=gwe2_scaffold_515_61 id=2070289 tax=TA06 species=Cyanophora paradoxa genus=Cyanophora taxon_order=unknown taxon_class=Glaucocystophyceae phylum=unknown
rplR; 50S ribosomal protein L18
TA06_GWE2_final_5_20
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists


8909..9481
DNA (573bp) protein (191aa)
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RIFOXYC12_FULL_TA06_54_24_curated
30S ribosomal protein S5 alias=gwe2_scaffold_515_60 id=2070287 tax=TA06 species=Veillonella sp. oral taxon 780 str. F0422 genus=Veillonella taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes rbh
30S ribosomal protein S5
TA06_GWE2_final_5_21
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists


9551..9754
DNA (204bp) protein (68aa)
50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RIFOXYC12_FULL_TA06_54_24_curated
50S ribosomal protein L30 alias=gwe2_scaffold_515_59 id=2070284 tax=TA06 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes
50S ribosomal protein L30
TA06_GWE2_final_5_22
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists


9756..10202
DNA (447bp) protein (149aa)
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RIFOXYC12_FULL_TA06_54_24_curated
50S ribosomal protein L15 alias=gwe2_scaffold_515_58 id=2070279 tax=TA06 species=Desulfuromonas acetoxidans DSM 684 genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria
50S ribosomal protein L15
TA06_GWE2_final_5_23
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists


10264..11577
DNA (1314bp) protein (438aa)
secY; preprotein translocase subunit SecY Tax=RIFOXYC12_FULL_TA06_54_24_curated
Protein translocase subunit SecY alias=gwe2_scaffold_515_57 id=2070277 tax=TA06 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown rbh
secY; preprotein translocase subunit SecY
TA06_GWE2_final_5_24
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

11581..12234
DNA (654bp) protein (218aa)
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] Tax=RIFOXYC12_FULL_TA06_54_24_curated
Adenylate kinase alias=gwe2_scaffold_515_56 id=2070275 tax=TA06 species=Archaeoglobus profundus DSM 5631 genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota rbh
adenylate kinase
TA06_GWE2_final_5_25
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

12231..12980
DNA (750bp) protein (250aa)
methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RIFOXYC12_FULL_TA06_54_24_curated
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase alias=gwe2_scaffold_515_55 id=2070273 tax=TA06 species=Acetohalobium arabaticum DSM 5501 genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes rbh
TA06_GWE2_final_5_26
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

13031..13249
DNA (219bp) protein (73aa)
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RIFOXYC12_FULL_TA06_54_24_curated
Translation initiation factor IF-1 2 alias=gwe2_scaffold_515_54 id=2070271 tax=TA06 species=Clostridia genus=unknown taxon_order=unknown taxon_class=Clostridia phylum=Firmicutes
infA; translation initiation factor IF-1
TA06_GWE2_final_5_27
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

13287..13400
DNA (114bp) protein (38aa)
50S ribosomal protein L36 Tax=RIFOXYC12_FULL_TA06_54_24_curated
50S ribosomal protein L36 alias=gwe2_scaffold_515_53 id=2070269 tax=TA06 species=Thiorhodovibrio sp. 970 genus=Thiorhodovibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria
50S ribosomal protein L36
TA06_GWE2_final_5_28
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists


13439..13822
DNA (384bp) protein (128aa)
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFOXYC12_FULL_TA06_54_24_curated
30S ribosomal protein S13 alias=gwe2_scaffold_515_52 id=2070266 tax=TA06 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes
30S ribosomal protein S13
TA06_GWE2_final_5_29
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists


13867..14256
DNA (390bp) protein (130aa)
rpsK; 30S ribosomal protein S11 Tax=RIFOXYC12_FULL_TA06_54_24_curated
30S ribosomal protein S11 alias=gwe2_scaffold_515_51 id=2070263 tax=TA06 species=Thermacetogenium phaeum DSM 12270 genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes
rpsK; 30S ribosomal protein S11
TA06_GWE2_final_5_30
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists


14344..14973
DNA (630bp) protein (210aa)
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RIFOXYC12_FULL_TA06_54_24_curated
30S ribosomal protein S4 alias=gwe2_scaffold_515_50 id=2070260 tax=TA06 species=Moorella thermoacetica ATCC 39073 genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes rbh
rpsD; 30S ribosomal protein S4
Displaying items 1-30 of 77 in total

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