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TA06_GWE2_final_7

Alias: TA06_final5_7

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Displaying items 1-30 of 533 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
TA06_GWE2_final_7_1
unknown

Not on your lists

comp(24..254)
DNA (231bp) protein (77aa)

This feature has no annotations

TA06_GWE2_final_7_2
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

525..3047
DNA (2523bp) protein (841aa)
peptidase S8/S53 subtilisin kexin sedolisin Tax=RIFOXYC12_FULL_TA06_54_24_curated
Peptidase S8 and S53 subtilisin kexin sedolisin alias=gwe2_scaffold_136_332 id=1799444 tax=TA06 species=Herpetosiphon aurantiacus DSM 785 genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi rbh
peptidase S8/S53 subtilisin kexin sedolisin
TA06_GWE2_final_7_3
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(3126..3458)
DNA (333bp) protein (111aa)
hypothetical protein; K09137 hypothetical protein Tax=RIFOXYC12_FULL_TA06_54_24_curated
Putative uncharacterized protein alias=gwe2_scaffold_136_331 id=1799442 tax=TA06 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes
hypothetical protein
TA06_GWE2_final_7_4
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(3581..4066)
DNA (486bp) protein (162aa)
alias=gwe2_scaffold_136_330 Tax=RIFOXYC12_FULL_TA06_54_24_curated
alias=gwe2_scaffold_136_330 id=1799441 tax=TA06 rbh
TA06_GWE2_final_7_5
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(4144..4518)
DNA (375bp) protein (125aa)
CrcB-like protein; K06199 CrcB protein Tax=RIFOXYC12_FULL_TA06_54_24_curated
Protein CrcB homolog alias=gwe2_scaffold_136_329 id=1799439 tax=TA06 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes
CrcB-like protein
TA06_GWE2_final_7_6
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(4532..5785)
DNA (1254bp) protein (418aa)
AhpC/TSA family protein Tax=RIFOXYC12_FULL_TA06_54_24_curated
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen alias=gwe2_scaffold_136_328 id=1799437 tax=TA06 species=Mucilaginibacter paludis DSM 18603 genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes rbh
AhpC/TSA family protein
TA06_GWE2_final_7_7
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(5845..7464)
DNA (1620bp) protein (540aa)
ctp synthase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=RIFOXYC12_FULL_TA06_54_24_curated
ctp synthase (EC:6.3.4.2)
CTP synthase alias=gwe2_scaffold_136_327 id=1799435 tax=TA06 species=Thermosediminibacter oceani DSM 16646 genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes rbh
TA06_GWE2_final_7_8
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(7691..10321)
DNA (2631bp) protein (877aa)
secreted metalloprotease Tax=RIFOXYC12_FULL_TA06_54_24_curated
Putative protease alias=gwe2_scaffold_136_326 id=1799433 tax=TA06 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae rbh
secreted metalloprotease
TA06_GWE2_final_7_9
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(10426..11745)
DNA (1320bp) protein (440aa)
rarA; polynucleotide enzyme with nucleotide triphosphate hydrolase domain Tax=RIFOXYC12_FULL_TA06_54_24_curated
Putative polynucleotide enzyme with nucleotide triphosphate hydrolase domain alias=gwe2_scaffold_136_325 id=1799431 tax=TA06 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown rbh
rarA; polynucleotide enzyme with nucleotide triphosphate hydrolase domain
TA06_GWE2_final_7_10
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(11820..13604)
DNA (1785bp) protein (595aa)
amiA; N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28) Tax=RIFOXYC12_FULL_TA06_54_24_curated
amiA; N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase alias=gwe2_scaffold_136_324 id=1799429 tax=TA06 species=Gloeobacter violaceus PCC 7421 genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria rbh
TA06_GWE2_final_7_11
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(13604..14005)
DNA (402bp) protein (134aa)
alias=gwe2_scaffold_136_323 Tax=RIFOXYC12_FULL_TA06_54_24_curated
alias=gwe2_scaffold_136_323 id=1799428 tax=TA06
TA06_GWE2_final_7_12
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(14046..15230)
DNA (1185bp) protein (395aa)
hypothetical protein; K07007 Tax=RIFOXYC12_FULL_TA06_54_24_curated
HI0933 family protein alias=gwe2_scaffold_136_322 id=1799426 tax=TA06 species=Desulfotomaculum reducens MI-1 genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes rbh
hypothetical protein
TA06_GWE2_final_7_13
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(15277..15963)
DNA (687bp) protein (229aa)
hydrogenase nickel incorporation protein HypB Tax=RIFOXYC12_FULL_TA06_54_24_curated
Hydrogenase accessory protein HypB alias=gwe2_scaffold_136_321 id=1799424 tax=TA06 species=Desulfitobacterium dichloroeliminans LMG P-21439 genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes rbh
hydrogenase nickel incorporation protein HypB
TA06_GWE2_final_7_14
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(15960..16304)
DNA (345bp) protein (115aa)
hydrogenase nickel incorporation protein HypA; K04651 hydrogenase nickel incorporation protein HypA/HybF Tax=RIFOXYC12_FULL_TA06_54_24_curated
Probable hydrogenase nickel incorporation protein HypA alias=gwe2_scaffold_136_320 id=1799422 tax=TA06 species=Dehalogenimonas lykanthroporepellens BL-DC-9 genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidetes phylum=Chloroflexi
hypA; hydrogenase nickel incorporation protein HypA/HybF
TA06_GWE2_final_7_15
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(16304..18859)
DNA (2556bp) protein (852aa)
hypothetical protein Tax=RIFOXYC12_FULL_TA06_54_24_curated
Membrane protein, putative alias=gwe2_scaffold_136_319 id=1799420 tax=TA06 species=Salinibacter ruber genus=Salinibacter taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes rbh
hypothetical protein
TA06_GWE2_final_7_16
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(18860..19702)
DNA (843bp) protein (281aa)
hypothetical protein Tax=RIFOXYC12_FULL_TA06_54_24_curated
Putative uncharacterized protein alias=gwe2_scaffold_136_318 id=1799419 tax=TA06 species=Chloroherpeton thalassium ATCC 35110 genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi rbh
hypothetical protein
TA06_GWE2_final_7_17
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(19832..20671)
DNA (840bp) protein (280aa)
dihydropteroate synthase (EC:2.5.1.15); K00796 dihydropteroate synthase [EC:2.5.1.15] Tax=RIFOXYC12_FULL_TA06_54_24_curated
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase alias=gwe2_scaffold_136_317 id=1799417 tax=TA06 species=Acetohalobium arabaticum DSM 5501 genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes rbh
TA06_GWE2_final_7_18
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(20716..22149)
DNA (1434bp) protein (478aa)
Gingipain R Tax=RIFOXYC12_FULL_TA06_54_24_curated
Putative uncharacterized protein alias=gwe2_scaffold_136_316 id=1799416 tax=TA06 species=Caldithrix abyssi DSM 13497 genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown rbh
Gingipain R
TA06_GWE2_final_7_19
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(22268..22789)
DNA (522bp) protein (174aa)
GTP cyclohydrolase I (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16] Tax=RIFOXYC12_FULL_TA06_54_24_curated
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 alias=gwe2_scaffold_136_315 id=1799415 tax=TA06 species=Thermincola potens JR genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes rbh
TA06_GWE2_final_7_20
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(22839..24791)
DNA (1953bp) protein (651aa)
Cell division protease FtsH Tax=RIFOXYC12_FULL_TA06_54_24_curated
ATP-dependent zinc metalloprotease FtsH alias=gwe2_scaffold_136_314 id=1799414 tax=TA06 species=Caldithrix abyssi DSM 13497 genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown rbh
Cell division protease FtsH
TA06_GWE2_final_7_21
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(24792..25325)
DNA (534bp) protein (178aa)
hpt; hypoxanthine phosphoribosyltransferase Hpt (EC:2.4.2.8) Tax=RIFOXYC12_FULL_TA06_54_24_curated
hpt; hypoxanthine phosphoribosyltransferase Hpt (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase Hpt alias=gwe2_scaffold_136_313 id=1799388 tax=TA06 species=Clostridium acidurici 9a genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes rbh
TA06_GWE2_final_7_22
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(25322..26719)
DNA (1398bp) protein (466aa)
tRNA(Ile)-lysidine synthetase; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] Tax=RIFOXYC12_FULL_TA06_54_24_curated
tRNA(Ile)-lysidine synthase alias=gwe2_scaffold_136_312 id=1799384 tax=TA06 species=Thermosediminibacter oceani DSM 16646 genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes rbh
tRNA(Ile)-lysidine synthetase
TA06_GWE2_final_7_23
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(26818..27348)
DNA (531bp) protein (177aa)
glutathionylspermidine synthase (EC:6.3.1.8) Tax=RIFOXYC12_FULL_TA06_54_24_curated
Putative uncharacterized protein alias=gwe2_scaffold_136_311 id=1799380 tax=TA06 species=Candidatus Micrarchaeum acidiphilum ARMAN-2 genus=Candidatus Micrarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota rbh
shikimate kinase I
TA06_GWE2_final_7_24
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(27506..27775)
DNA (270bp) protein (90aa)
hypothetical protein Tax=RIFOXYC12_FULL_TA06_54_24_curated
Membrane protein alias=gwe2_scaffold_136_310 id=1799376 tax=TA06 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria
hypothetical protein
TA06_GWE2_final_7_25
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(27792..28775)
DNA (984bp) protein (328aa)
Radical SAM domain-containing protein; K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] Tax=RIFOXYC12_FULL_TA06_54_24_curated
Radical SAM domain protein alias=gwe2_scaffold_136_309 id=1799372 tax=TA06 species=Mahella australiensis 50-1 BON genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes rbh
Radical SAM domain-containing protein
TA06_GWE2_final_7_26
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(28884..29417)
DNA (534bp) protein (178aa)
hypothetical protein; K07040 uncharacterized protein Tax=RIFOXYC12_FULL_TA06_54_24_curated
Uncharacterized protein alias=gwe2_scaffold_136_308 id=1799368 tax=TA06 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria rbh
hypothetical protein
TA06_GWE2_final_7_27
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(29610..30935)
DNA (1326bp) protein (442aa)
ackA; acetate kinase AckA (EC:2.7.2.1) Tax=RIFOXYC12_FULL_TA06_54_24_curated
ackA; acetate kinase AckA (EC:2.7.2.1)
Acetate kinase AckA alias=gwe2_scaffold_136_307 id=1799364 tax=TA06 species=Thermacetogenium phaeum DSM 12270 genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes rbh
Part of pyruvate metabolism, along with pyruvate/ferredoxin osidoreductase Darae Jun (2/3/14)
TA06_GWE2_final_7_28
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(31156..31650)
DNA (495bp) protein (165aa)
ndk; nucleoside diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RIFOXYC12_FULL_TA06_54_24_curated
Nucleoside diphosphate kinase alias=gwe2_scaffold_136_306 id=1799360 tax=TA06 species=Vibrionales genus=unknown taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria rbh
ndk; nucleoside diphosphate kinase
TA06_GWE2_final_7_29
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(31647..32189)
DNA (543bp) protein (181aa)
2-oxoacid:ferredoxin oxidoreductase, gamma subunit Tax=RIFOXYC12_FULL_TA06_54_24_curated
Pyruvate/ketoisovalerate oxidoreductase, gamma subunit alias=gwe2_scaffold_136_305 id=1799356 tax=TA06 species=Desulfotomaculum gibsoniae DSM 7213 genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes rbh
2-oxoacid:ferredoxin oxidoreductase, gamma subunit
2-oxoacid:ferredoxin oxidoreductase, gamma subunit; probably part of the TCA cycle Darae Jun (2/3/14)
TA06_GWE2_final_7_30
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(32317..33138)
DNA (822bp) protein (274aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=RIFOXYC12_FULL_TA06_54_24_curated
2-oxoglutarate ferredoxin oxidoreductase subunit beta (EC:1.2.7.3)
2-oxoglutarate ferredoxin oxidoreductase, beta subunit alias=gwe2_scaffold_136_304 id=1799352 tax=TA06 species=Thermosediminibacter oceani DSM 16646 genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes rbh
Displaying items 1-30 of 533 in total

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