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GWE2_RBX1_39_32_gwe2_scaffold_400

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Displaying items 1-30 of 49 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWE2_RBX1_39_32_gwe2_scaffold_400_1
unknown

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3..146
DNA (144bp) protein (48aa)
id=2012653 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2012653 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWE2_RBX1_39_32_gwe2_scaffold_400_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

269..739
DNA (471bp) protein (157aa)
tRNA-adenosine deaminase (EC:3.5.4.-)
tRNA-adenosine deaminase Tax=GWF2_RBX1_38_17_curated
Cytidine/deoxycytidylate deaminase family protein id=2148968 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWE2_RBX1_39_32_gwe2_scaffold_400_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(769..1632)
DNA (864bp) protein (288aa)
Putative uncharacterized protein id=2012655 bin=GWE2_RBX1_39_32 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein; K09116 hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_400_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(1745..2788)
DNA (1044bp) protein (348aa)
Glycosyl transferase group 1 id=2012656 bin=GWE2_RBX1_39_32 species=Thermoanaerobacter wiegelii genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
group 1 glycosyl transferase Tax=GWF2_RBX1_38_17_curated
group 1 glycosyl transferase
GWE2_RBX1_39_32_gwe2_scaffold_400_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

3259..4791
DNA (1533bp) protein (511aa)
Flagellin domain protein id=2012657 bin=GWE2_RBX1_39_32 species=SAR324 cluster bacterium JCVI-SC AAA005 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
flagellin domain-containing protein; K02406 flagellin Tax=GWF2_RBX1_38_17_curated
flagellin domain-containing protein
GWE2_RBX1_39_32_gwe2_scaffold_400_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

4915..5295
DNA (381bp) protein (127aa)
flagellin protein id=2012658 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
flagellin protein Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_400_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

5645..9187
DNA (3543bp) protein (1181aa)
Putative flagellar hook-associated protein 2 id=2012659 bin=GWE2_RBX1_39_32 species=Phycisphaera mikurensis genus=Phycisphaera taxon_order=Phycisphaerales taxon_class=Phycisphaerae phylum=Planctomycetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
fliD; putative flagellar hook-associated protein 2; K02407 flagellar hook-associated protein 2 Tax=GWF2_RBX1_38_17_curated
fliD; putative flagellar hook-associated protein 2
GWE2_RBX1_39_32_gwe2_scaffold_400_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

9224..9724
DNA (501bp) protein (167aa)
Hpt protein id=2012661 bin=GWE2_RBX1_39_32 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Hpt protein; K02422 flagellar protein FliS Tax=GWF2_RBX1_38_17_curated
Hpt protein
GWE2_RBX1_39_32_gwe2_scaffold_400_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

9736..11628
DNA (1893bp) protein (631aa)
Putative uncharacterized protein id=2012718 bin=GWE2_RBX1_39_32 species=Halanaerobium praevalens genus=Halanaerobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_400_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(11611..12816)
DNA (1206bp) protein (402aa)
hypothetical protein; K06320 spore maturation protein CgeB id=24608960 bin=RAAC11 species=Lawsonia intracellularis genus=Lawsonia taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
hypothetical protein; K06320 spore maturation protein CgeB Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_400_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(12768..13895)
DNA (1128bp) protein (376aa)
Uncharacterized protein conserved in bacteria id=2012727 bin=GWE2_RBX1_39_32 species=Roseburia intestinalis genus=Roseburia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_400_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(13908..15059)
DNA (1152bp) protein (384aa)
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase-like protein id=2012731 bin=GWE2_RBX1_39_32 species=Paenibacillus terrae genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Tax=GWF2_RBX1_38_17_curated
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
GWE2_RBX1_39_32_gwe2_scaffold_400_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(15391..16716)
DNA (1326bp) protein (442aa)
GTPase Der id=2012734 bin=GWE2_RBX1_39_32 species=Caloramator australicus genus=Caloramator taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
engA; GTP-binding protein EngA; K03977 GTP-binding protein Tax=GWF2_RBX1_38_17_curated
engA; GTP-binding protein EngA
GWE2_RBX1_39_32_gwe2_scaffold_400_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists


comp(16850..18343)
DNA (1494bp) protein (498aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K02945 small subunit ribosomal protein S1; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] Tax=GWF2_RBX1_38_17
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase id=2012736 bin=GWE2_RBX1_39_32 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWE2_RBX1_39_32_gwe2_scaffold_400_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(18578..19537)
DNA (960bp) protein (320aa)
Bacterial type II and III secretion system protein id=2012739 bin=GWE2_RBX1_39_32 species=Dictyoglomus turgidum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
type II and III secretion system protein Tax=GWF2_RBX1_38_17_curated
type II and III secretion system protein
GWE2_RBX1_39_32_gwe2_scaffold_400_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(19539..19964)
DNA (426bp) protein (142aa)
id=2012741 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2012741 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_400_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(19951..20793)
DNA (843bp) protein (281aa)
id=2012742 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2012742 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_400_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(20904..21356)
DNA (453bp) protein (151aa)
id=2012743 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2012743 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_400_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(21337..21774)
DNA (438bp) protein (146aa)
id=2012744 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2012744 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_400_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(21764..22042)
DNA (279bp) protein (93aa)
id=2012745 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2012745 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_400_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(22035..22454)
DNA (420bp) protein (140aa)
id=24608971 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24608971 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_400_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(22438..23199)
DNA (762bp) protein (254aa)
type IV prepilin leader peptidase PilD; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=GWF2_RBX1_38_17_curated
Type 4 prepilin-like proteins leader peptide-processing enzyme id=2012747 bin=GWE2_RBX1_39_32 species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
type IV prepilin leader peptidase PilD
GWE2_RBX1_39_32_gwe2_scaffold_400_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(23196..24482)
DNA (1287bp) protein (429aa)
homoserine dehydrogenase (EC:1.1.1.3); K00003 homoserine dehydrogenase [EC:1.1.1.3] Tax=GWF2_RBX1_38_17_curated
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase id=2012748 bin=GWE2_RBX1_39_32 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWE2_RBX1_39_32_gwe2_scaffold_400_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(24512..26848)
DNA (2337bp) protein (779aa)
DNA translocase FtsK/SpoIIIE id=2012749 bin=GWE2_RBX1_39_32 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ftsK; DNA translocase FtsK/SpoIIIE; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=GWF2_RBX1_38_17_curated
ftsK; DNA translocase FtsK/SpoIIIE
GWE2_RBX1_39_32_gwe2_scaffold_400_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(26914..27867)
DNA (954bp) protein (318aa)
Protein translocase subunit SecF id=2012750 bin=GWE2_RBX1_39_32 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
secF; preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF Tax=GWF2_RBX1_38_17_curated
secF; preprotein translocase subunit SecF
GWE2_RBX1_39_32_gwe2_scaffold_400_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(27882..29210)
DNA (1329bp) protein (443aa)
Protein translocase subunit SecD id=2149058 bin=GWD2_RBX1-related_39_127 species=Dethiosulfovibrio peptidovorans genus=Dethiosulfovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
protein-export membrane protein, SecD/SecF family Tax=GWF2_RBX1_38_17_curated
protein-export membrane protein, SecD/SecF family
GWE2_RBX1_39_32_gwe2_scaffold_400_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(29225..30430)
DNA (1206bp) protein (402aa)
queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=GWF2_RBX1_38_17_curated
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase id=2149060 bin=GWD2_RBX1-related_39_127 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWE2_RBX1_39_32_gwe2_scaffold_400_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

30628..31056
DNA (429bp) protein (143aa)
id=2012753 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=24608978 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_400_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

31170..31826
DNA (657bp) protein (219aa)
id=2012754 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2012754 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_400_30
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

31946..32368
DNA (423bp) protein (141aa)
id=2012755 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2012755 Tax=GWF2_RBX1_38_17_curated
Displaying items 1-30 of 49 in total

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