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GWE2_RBX1_39_32_gwe2_scaffold_734

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWE2_RBX1_39_32_gwe2_scaffold_734_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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347..721
DNA (375bp) protein (125aa)
Two component transcriptional regulator, winged helix family id=2153600 bin=GWE2_RBX1_39_32 species=Afipia sp. 1NLS2 genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
two component transcriptional regulator, winged helix family; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR Tax=GWF2_RBX1_38_17_curated
winged helix family two component transcriptional regulator
GWE2_RBX1_39_32_gwe2_scaffold_734_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(738..2534)
DNA (1797bp) protein (599aa)
amiA; N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28) Tax=GWF2_RBX1_38_17_curated
amiA; N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase id=2153603 bin=GWE2_RBX1_39_32 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWE2_RBX1_39_32_gwe2_scaffold_734_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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2805..3671
DNA (867bp) protein (289aa)
peptidase U61 LD-carboxypeptidase A; K01297 muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] Tax=GWF2_RBX1_38_17_curated
Peptidase U61 LD-carboxypeptidase A id=2153606 bin=GWE2_RBX1_39_32 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
peptidase U61 LD-carboxypeptidase A
GWE2_RBX1_39_32_gwe2_scaffold_734_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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3668..4243
DNA (576bp) protein (192aa)
Spore maturation protein A id=2153608 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein; K06373 spore maturation protein A Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_734_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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4240..4770
DNA (531bp) protein (177aa)
Spore maturation protein B id=2027291 bin=GWD2_RBX1-related_39_127 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
spore maturation protein B; K06374 spore maturation protein B Tax=GWF2_RBX1_38_17_curated
spore maturation protein B
GWE2_RBX1_39_32_gwe2_scaffold_734_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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4774..5475
DNA (702bp) protein (234aa)
Glutamine amidotransferases class-II id=2153614 bin=GWE2_RBX1_39_32 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
glutamine amidotransferases class-II; K07008 glutamine amidotransferase Tax=GWF2_RBX1_38_17_curated
glutamine amidotransferases class-II
GWE2_RBX1_39_32_gwe2_scaffold_734_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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5512..5826
DNA (315bp) protein (105aa)
Signal peptidase id=2027289 bin=GWD2_RBX1-related_39_127 species=Methanobacterium formicicum genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_734_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(5856..7220)
DNA (1365bp) protein (455aa)
putative maltodextrin glucosidase id=2153621 bin=GWE2_RBX1_39_32 species=Clostridium arbusti genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
glycosidase Tax=GWF2_RBX1_38_17_curated
glycosidase
GWE2_RBX1_39_32_gwe2_scaffold_734_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(7493..8692)
DNA (1200bp) protein (400aa)
DEAD/DEAH box helicase domain protein id=2153626 bin=GWE2_RBX1_39_32 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ATP-dependent RNA helicase RhlE Tax=GWF2_RBX1_38_17_curated
rhlE-2; ATP-dependent RNA helicase RhlE
GWE2_RBX1_39_32_gwe2_scaffold_734_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(8964..9845)
DNA (882bp) protein (294aa)
Leucine-rich repeat protein id=2153629 bin=GWE2_RBX1_39_32 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
leucine-rich repeat protein Tax=GWF2_RBX1_38_17_curated
leucine-rich repeat protein
GWE2_RBX1_39_32_gwe2_scaffold_734_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(9859..11055)
DNA (1197bp) protein (399aa)
Major facilitator superfamily transporter id=2027256 bin=GWD2_RBX1-related_39_127 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
major facilitator superfamily transporter Tax=GWF2_RBX1_38_17_curated
major facilitator superfamily transporter
GWE2_RBX1_39_32_gwe2_scaffold_734_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

11336..12139
DNA (804bp) protein (268aa)
Toxin A id=2153635 bin=GWE2_RBX1_39_32 species=Brachyspira pilosicoli genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_734_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(12162..14348)
DNA (2187bp) protein (729aa)
recQ; ATP-dependent DNA helicase RecQ (EC:3.6.1.-); K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12] Tax=GWF2_RBX1_38_17_curated
recQ; ATP-dependent DNA helicase RecQ (EC:3.6.1.-)
ATP-dependent DNA helicase RecQ id=2153664 bin=GWE2_RBX1_39_32 species=Clostridium perfringens genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWE2_RBX1_39_32_gwe2_scaffold_734_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(14528..15412)
DNA (885bp) protein (295aa)
Putative uncharacterized protein id=2027253 bin=GWD2_RBX1-related_39_127 species=Methanosarcina acetivorans genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_734_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(15484..15990)
DNA (507bp) protein (169aa)
Putative adenylate/guanylate cyclase id=2153668 bin=GWE2_RBX1_39_32 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
putative PAS/PAC sensor protein Tax=GWF2_RBX1_38_17_curated
putative PAS/PAC sensor protein
GWE2_RBX1_39_32_gwe2_scaffold_734_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(16058..17755)
DNA (1698bp) protein (566aa)
hoxX; hydrogenase maturation factor hoxX (EC:2.1.2.9); K00936 [EC:2.7.3.-] Tax=GWF2_RBX1_38_17_curated
hoxX; hydrogenase maturation factor hoxX (EC:2.1.2.9)
Hydrogenase maturation factor hoxX id=2153671 bin=GWE2_RBX1_39_32 species=Cupriavidus metallidurans genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWE2_RBX1_39_32_gwe2_scaffold_734_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(17752..18876)
DNA (1125bp) protein (375aa)
Hydrogenase formation HypD protein id=4014142 bin=GWF2_OP9-related_38_17 species=Neptuniibacter caesariensis genus=Neptuniibacter taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
hypD_[H]; [NiFe] hydrogenase metallocenter assembly protein HypD Tax=GWF2_RBX1_38_17_curated
hypD; hydrogenase expression/formation protein HypD
GWE2_RBX1_39_32_gwe2_scaffold_734_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(18959..20656)
DNA (1698bp) protein (566aa)
Digeranylgeranylglycerophospholipid reductase id=2153675 bin=GWE2_RBX1_39_32 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
geranylgeranyl reductase family protein Tax=GWF2_RBX1_38_17_curated
geranylgeranyl reductase
GWE2_RBX1_39_32_gwe2_scaffold_734_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

21015..21884
DNA (870bp) protein (290aa)
Ribonuclease BN id=2153679 bin=GWE2_RBX1_39_32 species=unknown genus=Lyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ribonuclease BN Tax=GWF2_RBX1_38_17_curated
ribonuclease BN
GWE2_RBX1_39_32_gwe2_scaffold_734_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(21906..22619)
DNA (714bp) protein (238aa)
CAAX amino terminal protease family protein id=2153682 bin=GWE2_RBX1_39_32 species=Myxococcus fulvus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
CAAX amino terminal protease family protein Tax=GWF2_RBX1_38_17_curated
CAAX amino terminal protease family protein
GWE2_RBX1_39_32_gwe2_scaffold_734_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

22917..23393
DNA (477bp) protein (159aa)
id=2153684 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2153684 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_734_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(23474..24598)
DNA (1125bp) protein (375aa)
putative RNA methylase; K07444 putative N6-adenine-specific DNA methylase [EC:2.1.1.-] Tax=GWF2_RBX1_38_17_curated
Methyltransferase id=2153685 bin=GWE2_RBX1_39_32 species=unknown genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
putative RNA methylase
GWE2_RBX1_39_32_gwe2_scaffold_734_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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25009..25284
DNA (276bp) protein (92aa)
id=24609200 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24609200 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_734_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(25439..26488)
DNA (1050bp) protein (350aa)
id=2153690 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=24609199 Tax=GWF2_RBX1_38_17_curated
Displaying 24 items

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