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GWE2_RBX1_39_32_gwe2_scaffold_411

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Displaying items 1-30 of 52 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWE2_RBX1_39_32_gwe2_scaffold_411_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(3..98)
DNA (96bp) protein (32aa)
id=2018462 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
alanine racemase domain-containing protein; K06997 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_411_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

606..1349
DNA (744bp) protein (248aa)
Flagellar basal-body rod protein FlgF id=3953457 bin=GWF2_OP9-related_38_17 species=Thermoanaerobacter italicus genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
flagellar basal-body rod protein FlgF; K02392 flagellar basal-body rod protein FlgG Tax=GWF2_RBX1_38_17_curated
flagellar basal-body rod protein FlgF
GWE2_RBX1_39_32_gwe2_scaffold_411_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

1365..2153
DNA (789bp) protein (263aa)
flgG; flagellar basal body rod protein FlgG; K02392 flagellar basal-body rod protein FlgG id=24610373 bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RAAC11 organism_group=Unknown_CP
flgG; flagellar basal body rod protein FlgG; K02392 flagellar basal-body rod protein FlgG Tax=GWF2_RBX1_38_17_curated
flgG; flagellar basal body rod protein FlgG
GWE2_RBX1_39_32_gwe2_scaffold_411_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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2158..2889
DNA (732bp) protein (244aa)
Flagella basal body P-ring formation protein FlgA id=2018470 bin=GWE2_RBX1_39_32 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
flagella basal body P-ring formation protein FlgA; K02386 flagella basal body P-ring formation protein FlgA Tax=GWF2_RBX1_38_17_curated
flagella basal body P-ring formation protein FlgA
GWE2_RBX1_39_32_gwe2_scaffold_411_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

2916..3515
DNA (600bp) protein (200aa)
Flagellar L-ring protein id=2018473 bin=GWE2_RBX1_39_32 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
flagellar L-ring protein; K02393 flagellar L-ring protein precursor FlgH Tax=GWF2_RBX1_38_17_curated
flagellar L-ring protein
GWE2_RBX1_39_32_gwe2_scaffold_411_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

3561..4655
DNA (1095bp) protein (365aa)
flagellar P-ring protein; K02394 flagellar P-ring protein precursor FlgI id=24610370 bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RAAC11 organism_group=Unknown_CP
flagellar P-ring protein; K02394 flagellar P-ring protein precursor FlgI Tax=GWF2_RBX1_38_17_curated
flagellar P-ring protein
GWE2_RBX1_39_32_gwe2_scaffold_411_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

4711..5052
DNA (342bp) protein (114aa)
Putative peptidoglycan hydrolase id=2018481 bin=GWE2_RBX1_39_32 species=Selenomonas ruminantium genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
flgJ; putative peptidoglycan hydrolase Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_411_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

5299..5607
DNA (309bp) protein (103aa)
Putative uncharacterized protein id=2018484 bin=GWE2_RBX1_39_32 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Putative uncharacterized protein Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_411_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

5579..6076
DNA (498bp) protein (166aa)
hypothetical protein AcelC_10217 id=2018486 bin=GWE2_RBX1_39_32 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
FlgN family protein Tax=GWF2_RBX1_38_17_curated
FlgN family protein
GWE2_RBX1_39_32_gwe2_scaffold_411_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

6101..7486
DNA (1386bp) protein (462aa)
Flagellar hook-associated protein FlgK id=2018489 bin=GWE2_RBX1_39_32 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
flagellar hook-associated protein FlgK; K02396 flagellar hook-associated protein 1 FlgK Tax=GWF2_RBX1_38_17_curated
flagellar hook-associated protein FlgK
GWE2_RBX1_39_32_gwe2_scaffold_411_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

7503..8747
DNA (1245bp) protein (415aa)
Flagellar hook-associated protein 3 id=2018492 bin=GWE2_RBX1_39_32 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
flagellar hook-associated protein 3; K02397 flagellar hook-associated protein 3 FlgL Tax=GWF2_RBX1_38_17_curated
flagellar hook-associated protein 3
GWE2_RBX1_39_32_gwe2_scaffold_411_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

8760..9239
DNA (480bp) protein (160aa)
Flagellar assembly factor FliW id=2078586 bin=GWD2_RBX1-related_39_127 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein; K13626 flagellar assembly factor FliW Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_411_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

9264..9479
DNA (216bp) protein (72aa)
Carbon storage regulator homolog id=2018534 bin=GWE2_RBX1_39_32 species=unknown genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
carbon storage regulator CsrA; K03563 carbon storage regulator Tax=GWF2_RBX1_38_17_curated
csrA; carbon storage regulator
GWE2_RBX1_39_32_gwe2_scaffold_411_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

9776..10465
DNA (690bp) protein (230aa)
Peptidase membrane zinc metallopeptidase id=2018536 bin=GWE2_RBX1_39_32 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
peptidase membrane zinc metallopeptidase; K06973 Tax=GWF2_RBX1_38_17_curated
peptidase membrane zinc metallopeptidase
GWE2_RBX1_39_32_gwe2_scaffold_411_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

10500..11366
DNA (867bp) protein (289aa)
tRNA dimethylallyltransferase (EC:2.5.1.75)
tRNA dimethylallyltransferase id=2018538 bin=GWE2_RBX1_39_32 species=Brevibacillus laterosporus genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
tRNA isopentenyltransferase MiaA Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_411_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

11499..12359
DNA (861bp) protein (287aa)
dapF; putative diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] Tax=GWF2_RBX1_38_17_curated
dapF; putative diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase id=2078571 bin=GWD2_RBX1-related_39_127 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWE2_RBX1_39_32_gwe2_scaffold_411_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists


12350..13219
DNA (870bp) protein (290aa)
lytB; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K02945 small subunit ribosomal protein S1; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] Tax=GWF2_RBX1
4-hydroxy-3-methylbut-2-enyl diphosphate reductase id=3953557 bin=GWF2_OP9-related_38_17 species=Anaerofustis stercorihominis genus=Anaerofustis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
GWE2_RBX1_39_32_gwe2_scaffold_411_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

13203..13919
DNA (717bp) protein (239aa)
ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3] Tax=GWF2_RBX1_38_17_curated
ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 id=2018544 bin=GWE2_RBX1_39_32 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWE2_RBX1_39_32_gwe2_scaffold_411_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(13949..15886)
DNA (1938bp) protein (646aa)
deoxyxylulose-5-phosphate synthase; K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] Tax=GWF2_RBX1_38_17_curated
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase id=3953566 bin=GWF2_OP9-related_38_17 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
GWE2_RBX1_39_32_gwe2_scaffold_411_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(16147..17046)
DNA (900bp) protein (300aa)
trans-isoprenyl diphosphate synthase; K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] id=24609772 bin=RAAC11 species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
trans-isoprenyl diphosphate synthase; K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=GWF2_RBX1_38_17_curated
trans-isoprenyl diphosphate synthase
GWE2_RBX1_39_32_gwe2_scaffold_411_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(16991..17374)
DNA (384bp) protein (128aa)
Exodeoxyribonuclease 7 small subunit id=2018550 bin=GWE2_RBX1_39_32 species=Clostridium nexile genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Exodeoxyribonuclease 7 small subunit Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_411_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(17431..18591)
DNA (1161bp) protein (387aa)
Exodeoxyribonuclease 7 large subunit id=3953581 bin=GWF2_OP9-related_38_17 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
exodeoxyribonuclease 7 large subunit Tax=GWF2_RBX1_38_17_curated
exodeoxyribonuclease 7 large subunit
GWE2_RBX1_39_32_gwe2_scaffold_411_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(18581..19729)
DNA (1149bp) protein (383aa)
carA; carbamoyl phosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] id=24609775 bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RAAC11 organism_group=Unknown_CP
carA; carbamoyl phosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] Tax=GWF2_RBX1_38_17_curated
carA; carbamoyl phosphate synthase small subunit
GWE2_RBX1_39_32_gwe2_scaffold_411_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(19761..21050)
DNA (1290bp) protein (430aa)
dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=GWF2_RBX1_38_17_curated
dihydroorotase (EC:3.5.2.3)
Dihydroorotase id=2018557 bin=GWE2_RBX1_39_32 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWE2_RBX1_39_32_gwe2_scaffold_411_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(21047..21985)
DNA (939bp) protein (313aa)
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=GWF2_RBX1_38_17_curated
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase id=2078533 bin=GWD2_RBX1-related_39_127 species=unknown genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWE2_RBX1_39_32_gwe2_scaffold_411_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(22240..23649)
DNA (1410bp) protein (470aa)
Phosphoglucomutase id=2018559 bin=GWE2_RBX1_39_32 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain i Tax=GWF2_RBX1_38_17_curated
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain i
GWE2_RBX1_39_32_gwe2_scaffold_411_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(23771..25021)
DNA (1251bp) protein (417aa)
carboxyl-terminal protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=GWF2_RBX1_38_17_curated
carboxyl-terminal protease (EC:3.4.21.102)
Carboxyl-terminal protease id=2018560 bin=GWE2_RBX1_39_32 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWE2_RBX1_39_32_gwe2_scaffold_411_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(25038..26174)
DNA (1137bp) protein (379aa)
M23B-like peptidase id=2018561 bin=GWE2_RBX1_39_32 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
M23B-like peptidase Tax=GWF2_RBX1_38_17_curated
M23B-like peptidase
GWE2_RBX1_39_32_gwe2_scaffold_411_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(26191..27963)
DNA (1773bp) protein (591aa)
UvrABC system protein C id=2018562 bin=GWE2_RBX1_39_32 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
excinuclease ABC subunit C; K03703 excinuclease ABC subunit C Tax=GWF2_RBX1_38_17_curated
excinuclease ABC subunit C
GWE2_RBX1_39_32_gwe2_scaffold_411_30
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists


comp(28042..28524)
DNA (483bp) protein (161aa)
50S ribosomal protein L9 id=2078516 bin=GWD2_RBX1-related_39_127 species=Desulfovibrio piger genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 Tax=GWF2_RBX1_38_17_curated
50S ribosomal protein L9
Displaying items 1-30 of 52 in total

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