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GWE2_RBX1_39_32_gwe2_scaffold_1957

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWE2_RBX1_39_32_gwe2_scaffold_1957_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(22..1242)
DNA (1221bp) protein (407aa)
Uncharacterized protein id=1867508 bin=GWE2_RBX1_39_32 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_1957_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(1534..1953)
DNA (420bp) protein (140aa)
Putative uncharacterized protein id=1867509 bin=GWE2_RBX1_39_32 species=Helicobacter bilis genus=Helicobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
MORN repeat-containing protein Tax=GWF2_RBX1_38_17_curated
MORN repeat-containing protein
GWE2_RBX1_39_32_gwe2_scaffold_1957_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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2330..2611
DNA (282bp) protein (94aa)
Hypothetical membrane protein id=1867510 bin=GWE2_RBX1_39_32 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_1957_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(2653..3219)
DNA (567bp) protein (189aa)
transcriptional regulator, TetR family id=24610019 bin=RAAC11 species=Orenia marismortui genus=Orenia taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
transcriptional regulator, TetR family Tax=GWF2_RBX1_38_17_curated
transcriptional regulator, TetR family
GWE2_RBX1_39_32_gwe2_scaffold_1957_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

3613..3747
DNA (135bp) protein (45aa)
id=1867512 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1867512 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_1957_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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3830..4258
DNA (429bp) protein (143aa)
Heat shock protein Hsp20 id=1867513 bin=GWE2_RBX1_39_32 species=unknown genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
heat shock protein Hsp20; K13993 HSP20 family protein Tax=GWF2_RBX1_38_17_curated
heat shock protein Hsp20
GWE2_RBX1_39_32_gwe2_scaffold_1957_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(4422..5630)
DNA (1209bp) protein (403aa)
Putative uncharacterized protein id=1867514 bin=GWE2_RBX1_39_32 species=unknown genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein; K02004 putative ABC transport system permease protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_1957_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(5627..6304)
DNA (678bp) protein (226aa)
ABC transporter related protein id=4425770 bin=GWF2_OP9-related_38_17 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein Tax=GWF2_RBX1_38_17_curated
ABC transporter-like protein
GWE2_RBX1_39_32_gwe2_scaffold_1957_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(6306..7481)
DNA (1176bp) protein (392aa)
Putative HlyD family secretion protein id=1867520 bin=GWE2_RBX1_39_32 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
secretion protein HlyD; K02005 HlyD family secretion protein Tax=GWF2_RBX1_38_17_curated
secretion protein HlyD
GWE2_RBX1_39_32_gwe2_scaffold_1957_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(7499..8899)
DNA (1401bp) protein (467aa)
Efflux pump, RND family, outer membrane protein id=1867522 bin=GWE2_RBX1_39_32 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
outer membrane efflux protein Tax=GWF2_RBX1_38_17_curated
RND transporter
GWE2_RBX1_39_32_gwe2_scaffold_1957_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(8978..9259)
DNA (282bp) protein (94aa)
id=1867524 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1867524 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_1957_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(9228..9470)
DNA (243bp) protein (81aa)
id=1867525 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1867525 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_1957_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(9512..11194)
DNA (1683bp) protein (561aa)
glutaminyl-tRNA synthetase (EC:6.1.1.18); K01886 glutaminyl-tRNA synthetase [EC:6.1.1.18] Tax=GWF2_RBX1_38_17_curated
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase id=1867526 bin=GWE2_RBX1_39_32 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Displaying 13 items

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