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GWE2_RBX1_39_32_gwe2_scaffold_3472

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWE2_RBX1_39_32_gwe2_scaffold_3472_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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3..164
DNA (162bp) protein (54aa)
Integrase catalytic subunit id=1980856 bin=GWE2_RBX1_39_32 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Integrase catalytic subunit Tax=GWF2_RBX1_38_17_curated
transposase
GWE2_RBX1_39_32_gwe2_scaffold_3472_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(312..593)
DNA (282bp) protein (94aa)
TnAtcArs resolvase id=2097708 bin=GWD2_RBX1-related_39_127 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
TnAtcArs resolvase Tax=GWF2_RBX1_38_17_curated
tnpR; Transposon Tn21 resolvase
GWE2_RBX1_39_32_gwe2_scaffold_3472_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

780..1586
DNA (807bp) protein (269aa)
id=1980862 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1980862 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_3472_4
unknown

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1635..1814
DNA (180bp) protein (60aa)

This feature has no annotations

GWE2_RBX1_39_32_gwe2_scaffold_3472_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(2230..2907)
DNA (678bp) protein (226aa)
hypothetical protein id=24611037 bin=RAAC11 species=Amycolatopsis mediterranei genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RAAC11 organism_group=Unknown_CP
Putative uncharacterized protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_3472_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(3061..3279)
DNA (219bp) protein (73aa)
id=24611038 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24611038 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_3472_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(3269..3838)
DNA (570bp) protein (190aa)
id=1980866 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1980866 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_3472_trna_1
unknown

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4080..4152
DNA (73bp)
transferRNA
GWE2_RBX1_39_32_gwe2_scaffold_3472_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(4218..4628)
DNA (411bp) protein (137aa)
id=1980867 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1980867 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_3472_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(4643..4978)
DNA (336bp) protein (112aa)
id=1980869 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1980869 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_3472_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(4969..5553)
DNA (585bp) protein (195aa)
RNA polymerase, sigma-24 subunit, RpoE id=1980870 bin=GWE2_RBX1_39_32 species=Desulfotomaculum reducens genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWF2_RBX1_38_17_curated
ECF subfamily RNA polymerase sigma-24 factor
GWE2_RBX1_39_32_gwe2_scaffold_3472_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

5968..6765
DNA (798bp) protein (266aa)
id=1980876 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1980876 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_3472_12
GWF2_Melainabacteria_32_7_curated, Melainabacteria, Bacteria

Not on your lists

6959..8404
DNA (1446bp) protein (482aa)
pyruvate kinase; K00873 pyruvate kinase [EC:2.7.1.40] id=24611044 bin=RAAC11 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=RAAC11 organism_group=Unknown_CP
pyruvate kinase; K00873 pyruvate kinase [EC:2.7.1.40] Tax=GWF2_Melainabacteria_32_7_curated
pyruvate kinase
GWE2_RBX1_39_32_gwe2_scaffold_3472_13
CG_Elusi_02, Elusimicrobia, Bacteria

Not on your lists

8493..9164
DNA (672bp) protein (224aa)
type 11 methyltransferase id=24611045 bin=RAAC11 species=Lactococcus raffinolactis genus=Lactococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
type 11 methyltransferase Tax=CG_Elusi_02
Methyltransferase type 11
GWE2_RBX1_39_32_gwe2_scaffold_3472_14
unknown

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comp(9195..9518)
DNA (324bp) protein (108aa)
id=24611046 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24611046 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
GWE2_RBX1_39_32_gwe2_scaffold_3472_15
unknown

Not on your lists

9652..9912
DNA (261bp) protein (87aa)
id=24611047 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24611047 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
Displaying 16 items

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