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GWE2_RBX1_39_32_gwe2_scaffold_188

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Displaying items 1-30 of 64 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWE2_RBX1_39_32_gwe2_scaffold_188_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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1..249
DNA (249bp) protein (83aa)
Putative uncharacterized protein id=4212554 bin=GWF2_OP9-related_38_17 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
hypothetical protein Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_188_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

265..591
DNA (327bp) protein (109aa)
id=1860067 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1860067 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_188_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

625..5739
DNA (5115bp) protein (1705aa)
Putative uncharacterized protein id=1860068 bin=GWE2_RBX1_39_32 species=Methanosarcina barkeri genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_188_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

5764..6087
DNA (324bp) protein (108aa)
id=1860071 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1860071 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_188_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

6179..6826
DNA (648bp) protein (216aa)
id=1860072 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1860072 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_188_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

7105..9435
DNA (2331bp) protein (777aa)
Multi-sensor signal transduction histidine kinase id=1860074 bin=GWE2_RBX1_39_32 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
multi-sensor signal transduction histidine kinase Tax=GWF2_RBX1_38_17_curated
multi-sensor signal transduction histidine kinase
GWE2_RBX1_39_32_gwe2_scaffold_188_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

9599..10372
DNA (774bp) protein (258aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit id=1860077 bin=GWE2_RBX1_39_32 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
oxidoreductase FAD/NAD(P)-binding domain-containing protein; K02823 dihydroorotate dehydrogenase electron transfer subunit Tax=GWF2_RBX1_38_17_curated
oxidoreductase FAD/NAD(P)-binding domain-containing protein
GWE2_RBX1_39_32_gwe2_scaffold_188_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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10578..10976
DNA (399bp) protein (133aa)
Histidine kinase id=1860080 bin=GWE2_RBX1_39_32 species=Dyadobacter fermentans genus=Dyadobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
histidine kinase Tax=GWF2_RBX1_38_17_curated
histidine kinase
GWE2_RBX1_39_32_gwe2_scaffold_188_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(11009..11620)
DNA (612bp) protein (204aa)
Radical SAM domain protein id=1860083 bin=GWE2_RBX1_39_32 species=Desulfotomaculum ruminis genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
radical SAM protein Tax=GWF2_RBX1_38_17_curated
radical SAM protein
GWE2_RBX1_39_32_gwe2_scaffold_188_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(11623..12309)
DNA (687bp) protein (229aa)
cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14] Tax=GWF2_RBX1_38_17_curated
Cytidylate kinase id=1860087 bin=GWE2_RBX1_39_32 species=Clostridium botulinum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
cytidylate kinase
GWE2_RBX1_39_32_gwe2_scaffold_188_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(12306..13316)
DNA (1011bp) protein (337aa)
Radical SAM domain protein; K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] Tax=GWF2_RBX1_38_17_curated
UPI00020A9CE8 related cluster id=1860091 bin=GWE2_RBX1_39_32 species=Thermodesulfobium narugense genus=Thermodesulfobium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Radical SAM domain protein
GWE2_RBX1_39_32_gwe2_scaffold_188_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

13547..14404
DNA (858bp) protein (286aa)
Shikimate dehydrogenase id=1860094 bin=GWE2_RBX1_39_32 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
shikimate 5-dehydrogenase Tax=GWF2_RBX1_38_17_curated
shikimate 5-dehydrogenase
GWE2_RBX1_39_32_gwe2_scaffold_188_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(14634..14750)
DNA (117bp) protein (39aa)
id=1860096 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1860096 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_188_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

14959..15468
DNA (510bp) protein (170aa)
ThiJ/PfpI domain-containing protein; K05520 protease I [EC:3.2.-.-] Tax=GWF2_RBX1_38_17_curated
ThiJ/PfpI domain-containing protein id=1860098 bin=GWE2_RBX1_39_32 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ThiJ/PfpI domain-containing protein
GWE2_RBX1_39_32_gwe2_scaffold_188_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

15508..16899
DNA (1392bp) protein (464aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=1860102 bin=GWE2_RBX1_39_32 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
two component sigma54 specific Fis family transcriptional regulator Tax=GWF2_RBX1_38_17_curated
two component sigma54 specific Fis family transcriptional regulator
GWE2_RBX1_39_32_gwe2_scaffold_188_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

17183..17635
DNA (453bp) protein (151aa)
Response regulator receiver protein id=1860107 bin=GWE2_RBX1_39_32 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
response regulator receiver protein Tax=GWF2_RBX1_38_17_curated
response regulator receiver protein
GWE2_RBX1_39_32_gwe2_scaffold_188_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

17829..19214
DNA (1386bp) protein (462aa)
Radical SAM domain protein id=1860111 bin=GWE2_RBX1_39_32 species=Archaeoglobus profundus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
radical SAM protein Tax=GWF2_RBX1_38_17_curated
radical SAM protein
GWE2_RBX1_39_32_gwe2_scaffold_188_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

19229..19855
DNA (627bp) protein (209aa)
Uncharacterized protein id=1860114 bin=GWE2_RBX1_39_32 species=unknown genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
N-acetyltransferase GCN5 Tax=GWF2_RBX1_38_17_curated
acetyltransferase family protein
GWE2_RBX1_39_32_gwe2_scaffold_188_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

19858..21213
DNA (1356bp) protein (452aa)
Fe-S oxidoreductase id=4212609 bin=GWF2_OP9-related_38_17 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
Fe-S oxidoreductase Tax=GWF2_RBX1_38_17_curated
Fe-S oxidoreductase
GWE2_RBX1_39_32_gwe2_scaffold_188_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

21247..23310
DNA (2064bp) protein (688aa)
signal transduction histidine kinase; K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=GWF2_RBX1_38_17_curated
Two-component sensor kinase id=2030971 bin=GWD2_RBX1-related_39_127 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
signal transduction histidine kinase
GWE2_RBX1_39_32_gwe2_scaffold_188_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

23445..24533
DNA (1089bp) protein (363aa)
peptidase M29, aminopeptidase II; K01269 aminopeptidase [EC:3.4.11.-] Tax=GWF2_RBX1_38_17_curated
Peptidase M29, aminopeptidase II id=1860152 bin=GWE2_RBX1_39_32 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
peptidase M29, aminopeptidase II
GWE2_RBX1_39_32_gwe2_scaffold_188_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

24543..25442
DNA (900bp) protein (300aa)
Thioredoxin reductase id=1860154 bin=GWE2_RBX1_39_32 species=Methanomethylovorans hollandica genus=Methanomethylovorans taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
thioredoxin-disulfide reductase Tax=GWF2_RBX1_38_17_curated
thioredoxin-disulfide reductase
GWE2_RBX1_39_32_gwe2_scaffold_188_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

26015..26401
DNA (387bp) protein (129aa)
Response regulator containing a CheY-like receiver domain and a GGDEF domain id=1860156 bin=GWE2_RBX1_39_32 species=Thermanaerovibrio velox genus=Thermanaerovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
response regulator receiver protein Tax=GWF2_RBX1_38_17_curated
response regulator receiver protein
GWE2_RBX1_39_32_gwe2_scaffold_188_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(26407..29577)
DNA (3171bp) protein (1057aa)
SNF2-related protein id=1860158 bin=GWE2_RBX1_39_32 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
putative DEAD/DEAH box helicase Tax=GWF2_RBX1_38_17_curated
putative DEAD/DEAH box helicase
GWE2_RBX1_39_32_gwe2_scaffold_188_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

30180..31886
DNA (1707bp) protein (569aa)
Type II secretion system protein E (GspE) id=2030960 bin=GWD2_RBX1-related_39_127 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
type II secretion system protein E (GspE); K02652 type IV pilus assembly protein PilB Tax=GWF2_RBX1_38_17_curated
type II secretion system protein E (GspE)
GWE2_RBX1_39_32_gwe2_scaffold_188_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

31910..33121
DNA (1212bp) protein (404aa)
Probable type 4 fimbrial assembly protein (PilC) id=1860162 bin=GWE2_RBX1_39_32 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
type 4 fimbrial assembly protein (PilC); K02653 type IV pilus assembly protein PilC Tax=GWF2_RBX1_38_17_curated
type 4 fimbrial assembly protein (PilC)
GWE2_RBX1_39_32_gwe2_scaffold_188_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

33266..33685
DNA (420bp) protein (140aa)
Pilin (Bacterial filament) id=1860164 bin=GWE2_RBX1_39_32 species=Pseudanabaena biceps genus=Pseudanabaena taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
pilA; pilin; K02650 type IV pilus assembly protein PilA Tax=GWF2_RBX1_38_17_curated
pilA; pilin
GWE2_RBX1_39_32_gwe2_scaffold_188_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

33822..34343
DNA (522bp) protein (174aa)
Type IV fimbrial biogenesis protein FimT id=1860166 bin=GWE2_RBX1_39_32 species=Halomonas sp. HAL1 genus=Halomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Type IV fimbrial biogenesis protein FimT Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_188_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

34361..34852
DNA (492bp) protein (164aa)
id=1860168 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1860168 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_188_30
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

34854..36443
DNA (1590bp) protein (530aa)
id=1860169 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1860169 Tax=GWF2_RBX1_38_17_curated
Displaying items 1-30 of 64 in total

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