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GWE2_RBX1_39_32_gwe2_scaffold_1647

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Displaying items 1-30 of 36 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWE2_RBX1_39_32_gwe2_scaffold_1647_1
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..900)
DNA (900bp) protein (300aa)
nucleotidyltransferase/DNA polymerase protein; K02346 DNA polymerase IV [EC:2.7.7.7] Tax=GWF2_Bacteroidetes_43_11_curated
Amino acid-binding ACT domain protein id=1834888 bin=GWE2_RBX1_39_32 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
DNA polymerase IV
GWE2_RBX1_39_32_gwe2_scaffold_1647_2
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(893..1480)
DNA (588bp) protein (196aa)
DNA polymerase V subunit; K03503 DNA polymerase V [EC:3.4.21.-] Tax=GWF2_Bacteroidetes_43_11_curated
LexA repressor id=1834891 bin=GWE2_RBX1_39_32 species=uncultured bacterium W4-21b genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
DNA polymerase V subunit
GWE2_RBX1_39_32_gwe2_scaffold_1647_trna_1
unknown

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1995..2067
DNA (73bp)
transferRNA
GWE2_RBX1_39_32_gwe2_scaffold_1647_trna_2
unknown

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2141..2214
DNA (74bp)
transferRNA
GWE2_RBX1_39_32_gwe2_scaffold_1647_trna_3
unknown

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2227..2299
DNA (73bp)
transferRNA
GWE2_RBX1_39_32_gwe2_scaffold_1647_trna_4
unknown

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2309..2382
DNA (74bp)
transferRNA
GWE2_RBX1_39_32_gwe2_scaffold_1647_3
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2409..3770
DNA (1362bp) protein (454aa)
Acetyl/propionyl-CoA carboxylase, alpha subunit; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=GWF2_Bacteroidetes_43_11_curated
Acetyl-CoA carboxylase, biotin carboxylase id=1834894 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
acetyl-CoA carboxylase, biotin carboxylase
GWE2_RBX1_39_32_gwe2_scaffold_1647_4
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3777..4187
DNA (411bp) protein (137aa)
N utilization substance protein B homolog id=1834897 bin=GWE2_RBX1_39_32 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
NusB antitermination factor; K03625 N utilization substance protein B Tax=GWF2_Bacteroidetes_43_11_curated
NusB antitermination factor
GWE2_RBX1_39_32_gwe2_scaffold_1647_5
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4253..4888
DNA (636bp) protein (212aa)
riboflavin synthase, subunit alpha; K00793 riboflavin synthase [EC:2.5.1.9] Tax=GWF2_Bacteroidetes_43_11_curated
riboflavin synthase, subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit id=1834901 bin=GWE2_RBX1_39_32 species=Syntrophobotulus glycolicus genus=Syntrophobotulus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWE2_RBX1_39_32_gwe2_scaffold_1647_6
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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4888..6096
DNA (1209bp) protein (403aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] Tax=GWF2_Bacteroidetes_43_11_curated
3,4-dihydroxy-2-butanone 4-phosphate synthase id=1834904 bin=GWE2_RBX1_39_32 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
3,4-dihydroxy-2-butanone 4-phosphate synthase
GWE2_RBX1_39_32_gwe2_scaffold_1647_7
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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6221..6688
DNA (468bp) protein (156aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:6.3.3.-); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] id=24610292 bin=RAAC11 species=Clostridium sporogenes genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:6.3.3.-); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] Tax=GWF2_Bacteroidetes_43_11_curated
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:6.3.3.-)
GWE2_RBX1_39_32_gwe2_scaffold_1647_8
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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6716..7822
DNA (1107bp) protein (369aa)
ABC transporter-like protein; K10112 maltose/maltodextrin transport system ATP-binding protein id=24610291 bin=RAAC11 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
ABC transporter-like protein; K10112 maltose/maltodextrin transport system ATP-binding protein Tax=GWF2_Bacteroidetes_43_11_curated
ABC transporter-like protein
GWE2_RBX1_39_32_gwe2_scaffold_1647_9
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(7881..8786)
DNA (906bp) protein (302aa)
Putative uncharacterized protein id=1834910 bin=GWE2_RBX1_39_32 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
insertion sequence element IS231E transposase Tax=GWF2_Bacteroidetes_43_11_curated
transposase DDE domain protein
GWE2_RBX1_39_32_gwe2_scaffold_1647_10
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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8900..9211
DNA (312bp) protein (104aa)
TNPA; transposase Tax=GWF2_Bacteroidetes_43_11_curated
Putative transposase id=1834912 bin=GWE2_RBX1_39_32 species=Cardinium endosymbiont of Encarsia pergandiella genus=Candidatus Cardinium taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
TNPA; transposase
GWE2_RBX1_39_32_gwe2_scaffold_1647_11
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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9204..10040
DNA (837bp) protein (279aa)
integrase catalytic subunit Tax=GWF2_Bacteroidetes_43_11_curated
Integrase catalytic region id=1834916 bin=GWE2_RBX1_39_32 species=unknown genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
integrase catalytic subunit
GWE2_RBX1_39_32_gwe2_scaffold_1647_12
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(10028..11701)
DNA (1674bp) protein (558aa)
transposase Tax=GWF2_Bacteroidetes_43_11_curated
transposase id=1834922 bin=GWE2_RBX1_39_32 species=unknown genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
transposase
GWE2_RBX1_39_32_gwe2_scaffold_1647_13
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(11743..12093)
DNA (351bp) protein (117aa)
Probable transposition resolvase id=1834925 bin=GWE2_RBX1_39_32 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
transposition resolvase Tax=GWF2_Bacteroidetes_43_11_curated
transposition resolvase
GWE2_RBX1_39_32_gwe2_scaffold_1647_14
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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12445..12915
DNA (471bp) protein (157aa)
id=1834931 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1834931 Tax=GWF2_Bacteroidetes_43_11_curated
GWE2_RBX1_39_32_gwe2_scaffold_1647_15
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12992..13696
DNA (705bp) protein (235aa)
ABC transporter; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] Tax=GWF2_Bacteroidetes_43_11_curated
ABC transporter related id=1834934 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ABC transporter
GWE2_RBX1_39_32_gwe2_scaffold_1647_16
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13698..14942
DNA (1245bp) protein (415aa)
Putative uncharacterized protein id=1834938 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein; K02004 putative ABC transport system permease protein Tax=GWF2_Bacteroidetes_43_11_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_1647_17
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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14956..15699
DNA (744bp) protein (248aa)
Putative uncharacterized protein id=1834942 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_Bacteroidetes_43_11_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_1647_18
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15696..16955
DNA (1260bp) protein (420aa)
Putative uncharacterized protein id=1834945 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_Bacteroidetes_43_11_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_1647_19
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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17062..17337
DNA (276bp) protein (92aa)
id=1834947 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1834947 Tax=GWF2_Bacteroidetes_43_11_curated
GWE2_RBX1_39_32_gwe2_scaffold_1647_20
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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17354..18640
DNA (1287bp) protein (429aa)
ABC-type transport system, involved in lipoprotein release, permease component id=1834948 bin=GWE2_RBX1_39_32 species=Desulfosporosinus acidiphilus genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ABC-type transport system, involved in lipoprotein release, permease component Tax=GWF2_Bacteroidetes_43_11_curated
ABC-type transport system, involved in lipoprotein release, permease component
GWE2_RBX1_39_32_gwe2_scaffold_1647_21
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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18633..19298
DNA (666bp) protein (222aa)
ABC transporter, ATP-binding protein id=1834950 bin=GWE2_RBX1_39_32 species=Paenibacillus sp. HGF7 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ABC-type antimicrobial peptide transport system, ATPase component Tax=GWF2_Bacteroidetes_43_11_curated
ABC-type antimicrobial peptide transport system, ATPase component
GWE2_RBX1_39_32_gwe2_scaffold_1647_22
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19291..19689
DNA (399bp) protein (133aa)
id=1834952 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1834952 Tax=GWF2_Bacteroidetes_43_11_curated
GWE2_RBX1_39_32_gwe2_scaffold_1647_23
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19694..20875
DNA (1182bp) protein (394aa)
ABC-type transport system, involved in lipoprotein release, permease component id=1834953 bin=GWE2_RBX1_39_32 species=Desulfosporosinus acidiphilus genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ABC-type transport system, involved in lipoprotein release, permease component Tax=GWF2_Bacteroidetes_43_11_curated
ABC-type transport system, involved in lipoprotein release, permease component
GWE2_RBX1_39_32_gwe2_scaffold_1647_24
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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20911..21390
DNA (480bp) protein (160aa)
Putative uncharacterized protein id=1834955 bin=GWE2_RBX1_39_32 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR49375.1}; Flags: Precursor;; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus me
GWE2_RBX1_39_32_gwe2_scaffold_1647_25
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21387..21929
DNA (543bp) protein (181aa)
Hypothetical membrane protein id=1834957 bin=GWE2_RBX1_39_32 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_Bacteroidetes_43_11_curated
permease
GWE2_RBX1_39_32_gwe2_scaffold_1647_26
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22037..22243)
DNA (207bp) protein (69aa)
id=1834959 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1834959 Tax=GWF2_Bacteroidetes_43_11_curated
Displaying items 1-30 of 36 in total

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